FFCP PHASE1:Hg19::chr9:135230305..135230319,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23064 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=445 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z333 | |||
|association_with_transcript=52bp_to_ENST00000224140,ENST00000372169,ENST00000393220,NM_015046,uc004cbk.2_5end | |||
|description=CAGE_peak_2_at_SETX_5end | |||
|id=chr9:135230305..135230319,- | |||
|ontology_enrichment_celltype=CL:0000738!5.24e-43!140;CL:0000037!1.84e-41!172;CL:0000566!1.84e-41!172;CL:0000988!8.80e-39!182;CL:0002087!1.33e-38!119;CL:0002032!1.41e-37!165;CL:0000837!1.41e-37!165;CL:0002031!1.38e-35!124;CL:0000766!2.02e-23!76;CL:0002057!4.46e-21!42;CL:0002009!1.45e-20!65;CL:0000557!3.86e-20!71;CL:0000763!8.06e-20!112;CL:0000049!8.06e-20!112;CL:0002194!1.16e-19!63;CL:0000576!1.16e-19!63;CL:0000040!1.16e-19!63;CL:0000559!1.16e-19!63;CL:0000860!5.11e-19!45;CL:0000839!1.00e-17!70;CL:0000542!5.98e-17!53;CL:0000051!5.98e-17!53;CL:0000838!1.74e-16!52;CL:0000134!9.02e-16!358;CL:0002320!3.78e-14!365;CL:0000219!5.99e-14!390;CL:0000048!1.22e-09!430;CL:0000034!1.45e-09!444;CL:0000723!4.76e-09!436;CL:0000945!1.19e-08!24;CL:0000826!1.19e-08!24;CL:0000236!3.85e-08!14;CL:0000084!1.70e-07!25;CL:0000827!1.70e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.94e-17;33!CL:0002057;8.94e-17;33!CL:0000576;1.94e-15;48!CL:0000473;6.35e-14;39!CL:0000234;6.35e-14;39!CL:0002087;1.81e-13;104!CL:0000766;2.04e-11;69!CL:0000542;5.73e-11;53!CL:0000738;3.95e-10;136!CL:0000945;6.58e-09;24!CL:0000236;1.34e-08;13!CL:0000988;2.08e-08;177!CL:0000763;3.33e-08;100!CL:0000084;1.81e-07;25!CL:0000094;2.25e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.61e-48,136;CL:0000037,2.48e-46,168;CL:0000988,2.50e-44,177;CL:0002087,2.47e-43,115;CL:0002032,5.70e-42,161;CL:0000837,5.70e-42,161;CL:0002031,9.79e-39,120;CL:0000766,3.19e-27,72;CL:0002009,9.03e-25,61;CL:0002194,9.77e-24,59;CL:0000576,9.77e-24,59;CL:0000040,9.77e-24,59;CL:0000559,9.77e-24,59;CL:0000557,1.87e-23,67;CL:0000860,2.26e-23,42;CL:0002057,2.26e-23,42;CL:0000763,3.15e-23,108;CL:0000049,3.15e-23,108;CL:0000473,5.95e-23,48;CL:0000234,5.95e-23,48;CL:0000839,3.34e-20,66;CL:0000134,2.29e-18,354;CL:0000542,2.41e-17,53;CL:0000051,2.41e-17,53;CL:0000838,7.76e-17,52;CL:0002320,1.45e-16,361;CL:0000219,1.78e-15,386;CL:0000048,3.56e-12,427;CL:0000034,5.91e-12,441;CL:0000723,1.59e-11,433;CL:0000236,6.49e-09,14;CL:0000945,6.91e-09,24;CL:0000826,6.91e-09,24;CL:0000084,1.82e-07,25;CL:0000827,1.82e-07,25;CL:0000094,2.57e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.06e-17;42!CL:0000051;5.73e-11;53!CL:0000049;3.72e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.17e-25!102;UBERON:0003061!2.17e-25!102;UBERON:0002193!6.71e-25!112;UBERON:0001474!1.03e-16!86;UBERON:0002371!2.63e-16!80;UBERON:0002405!1.11e-14!115;UBERON:0004765!1.84e-13!101;UBERON:0001434!1.84e-13!101;UBERON:0002384!5.97e-13!375;UBERON:0000178!4.66e-09!15;UBERON:0000179!4.66e-09!15;UBERON:0000463!4.66e-09!15;UBERON:0003081!5.09e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.16e-10;15!UBERON:0000179;4.16e-10;15!UBERON:0000463;4.16e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-29,98;UBERON:0003061,1.39e-29,98;UBERON:0002193,9.33e-29,108;UBERON:0002405,1.06e-20,93;UBERON:0001474,1.28e-19,82;UBERON:0002371,3.30e-19,76;UBERON:0004765,1.17e-16,90;UBERON:0002384,2.55e-15,371;UBERON:0001434,8.63e-15,100;UBERON:0003081,1.07e-12,203;UBERON:0000178,6.14e-10,15;UBERON:0000179,6.14e-10,15;UBERON:0000463,6.14e-10,15 | |||
|phase1_expression=1.63510541343501,0.856402095563933,1.69145284915165,1.0007329835313,0.446961094427288,0.872338524100369,0,1.26343974685366,0.783556884599516,0,0,0.218441372130172,0,0.247532705920093,0.994192127183747,1.34465029290355,1.20538905604795,0,2.43966399395253,0.123121058076788,0.612002073732759,0,0.286235987131057,0.410623275218653,0.87879847716362,1.06978768047132,0.738905305049512,0.865818594450472,5.90046415273356,9.97956435052753,7.89562228911988,0,0.6024118375565,0.369754010166788,2.94375362205146,2.70121541726101,4.9912074686924,5.53995408531877,4.8130667392834,5.64228263861215,2.23915474239924,3.88672399222775,2.06060454107349,5.67053131240302,6.42389104270976,4.36651310138069,2.78914844286822,5.34518254428373,5.26500830521676,9.20615655430881,5.89169625016932,10.6417003449863,3.7922024881028,2.5819387343353,5.41705946377367,3.01187743268168,4.63940455098338,5.8428105955722,3.67300670845083,3.53021929783703,7.67204550958849,11.5447955065351,8.17800996248691,10.6556187633174,2.90209238628584,3.40431134814684,3.11411124497787,5.7787193009051,4.17186334736161,10.8594422352558,3.63239701580021,4.05105399586321,5.37986058649504,4.64761629886272,4.889898899196,5.2414661377094,3.70684482783434,3.30389164251314,6.10757229448904,8.26536956849621,7.55883373356542,8.03722276564389,3.51992488922645,7.09980194640771,8.00558328477199,7.25441378363062,5.20514783146816,8.04653415936277,7.27149360063348,4.77026877267682,7.39976859842283,7.6340834618222,6.88091810625412,7.93027971474155,11.2101712596307,2.37045676297569,3.73748563216283,2.75107533924415,5.96244347098577,1.17030546773475,2.28145586643513,1.89379122293893,0,3.11949279278486,2.65145316727353,2.87994062958707,3.24964636518019,1.66518715643378,0.910415432919148,1.47994114143309,1.38175008892924,1.73881851441031,2.22429844743091,0.802622484269139,1.04535523804977,2.26618685395132,2.29932296161153,3.09264700934367,1.51811815211702,0.95569624297229,5.20866763085135,2.85135613334512,2.25862678616659,2.04778577847069,1.24930726552346,2.60454977248419,4.10563998460523,8.0642697289893,6.95344509037119,6.37227377084316,0,0.670700859703636,0.383587685530591,1.44575660953827,1.50401373190767,0.579386075843295,2.3858578411533,0.973269740605272,1.89069634328136,1.99556457716308,1.14185221401064,0.851363990735132,0,0.370784442784429,4.86821090482025,4.52737316978095,2.39324328933957,8.82415309929765,8.57992366170192,9.28643753323912,2.18638648103376,0.860234595106124,0.347140501607594,0,1.25849830862972,1.6507082516404,1.8809546988313,5.42675194255591,6.04802646567407,10.7110596084694,4.43112248820062,0.760272105718513,1.46437234528902,1.10298924103761,0,3.03619076165871,2.69435247151404,2.81528701208306,1.53316637465883,4.74632829784064,2.01521918323448,40.8519294051796,23.2668158488995,0.436094052142534,0.496971951695318,1.51956613997496,3.57504788195691,0.573673241497627,1.06400514659507,0.560677600142307,0,0.49333509683432,2.8008993185979,1.21239604862719,1.30769522490767,1.21085942115945,1.15235184896,0.234321431833797,1.24864030732128,0,0.448346041655403,0.352303495931295,0.485618833104395,0.421352420106746,0.408308342509787,0.245668634623536,0.309977343527296,1.18800285728205,0.989067717114227,0.910161361938026,0,0.168336113954066,0,1.38532057742091,1.75591048352335,1.5324389789951,1.20190447125277,0.907457465280168,2.33206526395521,0.427114777637135,1.90738711043606,0.600182192168805,1.13357782162283,2.57640540045629,0.37223371266318,2.53164498361899,1.26668106709558,1.26216887122057,0.828449087780694,1.61646056818812,1.06502877754984,0.705264687593482,0.508681776931463,1.73934767846967,2.72746120590835,2.58124135850103,0.731842236777572,0.662648841607426,0.580969714347592,1.65857688024593,1.00928340350251,0.36497735907583,0,1.28648187638577,0,0.928735856063958,0.721879481669586,0.946454400318751,0.168584690078102,0.723033089650446,0.220587945464788,0.871517776369625,0.237270619111097,0.404493924480493,0.98110732562673,0.38474715694639,2.21446636387394,0,0,0,0,0,2.95394953340702,10.5951143859516,0.983907508344908,0.343135620597051,1.09750285408626,0,0.904760751704678,0.0925884451585296,0.325808305310325,0,0,0.695582429850461,1.99594780200897,1.15493158208859,0,1.33177906564219,0.790204397959275,0,1.96973604869918,1.17002132569619,1.33768046059855,0,4.03157107677263,1.55952606966625,0.806026704325635,1.16253575405585,0,3.4486426652716,0.880484340132261,1.86595303986695,0.720599767084807,0.50496973370552,0.63497894292169,0.381988425558278,0,1.71072446022705,0.925447434329912,1.50171528921959,0.857479297891735,0.336393253036082,0.43596006883328,0.4400297149257,1.03417372606222,0,0.845302752556,1.86156681609409,0,0.257207374262142,0,0.799266537048298,0.714889968290738,0,0,0,1.42156779497018,0,0.602878754119172,0.871533458600294,0.799783929456456,1.2162378064119,2.51128545716063,2.10833939483032,0.718874566474748,0,0,2.02693829334611,2.26023954805422,1.96967059563885,2.91421374383171,9.65450724989443,7.76259269494262,11.9359023740166,0,1.30139853857622,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| |||
|short_description=p2@SETX | |||
}} |
Revision as of 03:50, 23 January 2014
Short description: | p2@SETX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SETX_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000224140, ENST00000372169, ENST00000393220, NM_015046, uc004cbk.2_5end |
EntrezGene: | SETX |
HGNC: | 445 |
UniProt: | Q7Z333 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.39e-29 | 98 |
blood island | 1.39e-29 | 98 |
hemolymphoid system | 9.33e-29 | 108 |
immune system | 1.06e-20 | 93 |
bone element | 1.28e-19 | 82 |
bone marrow | 3.30e-19 | 76 |
skeletal element | 1.17e-16 | 90 |
connective tissue | 2.55e-15 | 371 |
skeletal system | 8.63e-15 | 100 |
lateral plate mesoderm | 1.07e-12 | 203 |
blood | 6.14e-10 | 15 |
haemolymphatic fluid | 6.14e-10 | 15 |
organism substance | 6.14e-10 | 15 |