FFCP PHASE1:Hg19::chr9:139543445..139543462,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_at_chr9:139543445..139543462,+ | |||
|id=chr9:139543445..139543462,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.34e-69!24;CL:0000115!2.19e-64!35;CL:0000071!7.11e-52!18;CL:0002546!7.11e-52!18;CL:0002078!1.19e-49!44;CL:0000213!1.35e-36!57;CL:0000215!1.35e-36!57;CL:1000413!1.47e-29!9;CL:0002544!3.91e-20!6;CL:0005020!4.88e-19!6;CL:0002138!4.88e-19!6;CL:0005022!4.88e-19!6;CL:0000222!2.74e-16!119;CL:0002543!1.41e-14!6;CL:0000076!7.75e-12!62;CL:0002144!2.57e-11!3;CL:0002618!5.20e-11!3;CL:0000666!2.91e-08!4;CL:0002188!2.91e-08!4;CL:1000612!4.62e-08!7;CL:1000746!4.62e-08!7;CL:0002545!5.05e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000071;9.96e-93;18!CL:0002139;4.49e-87;24!CL:0000115;4.19e-72;36!CL:1000413;1.39e-46;9!CL:0002078;1.35e-44;45!CL:0000213;5.45e-31;58!CL:0000215;5.45e-31;58!CL:0002543;2.76e-28;6!CL:0002544;8.24e-28;6!CL:0002144;3.37e-21;3!CL:0002618;1.07e-20;3!CL:0002545;1.12e-14;2!CL:0000076;1.35e-14;63!CL:0002188;3.48e-13;5!CL:1000746;1.48e-09;7!CL:1000612;1.48e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,5.14e-93,18;CL:0002546,5.14e-93,18;CL:0002139,2.93e-87,24;CL:0000115,9.44e-87,36;CL:0002078,1.37e-68,45;CL:0000213,2.71e-52,58;CL:0000215,2.71e-52,58;CL:1000413,1.09e-46,9;CL:0002543,2.33e-28,6;CL:0002544,7.59e-28,6;CL:0000076,2.44e-24,63;CL:0000222,7.15e-23,121;CL:0002144,2.57e-21,3;CL:0002618,1.07e-20,3;CL:0002545,1.20e-14,2;CL:0002188,4.19e-13,5;CL:1000746,1.69e-09,7;CL:1000612,1.69e-09,7;CL:0002321,9.68e-09,250;CL:0000066,1.09e-08,253 | |||
|ontology_enrichment_development_v019=CL:0002546;9.96e-93;18!CL:0000222;8.83e-11;121 | |||
|ontology_enrichment_disease=DOID:8692!2.85e-12!31;DOID:1240!3.23e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.54e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.79e-09,31;DOID:1240,2.29e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001986!7.11e-52!18;UBERON:0004638!7.11e-52!18;UBERON:0004852!7.11e-52!18;UBERON:0000487!1.39e-41!22;UBERON:0006914!4.99e-36!25;UBERON:0003915!1.47e-29!9;UBERON:0004700!1.47e-29!9;UBERON:0001917!1.47e-29!9;UBERON:0000055!3.44e-24!69;UBERON:0002049!2.87e-20!79;UBERON:0007798!2.87e-20!79;UBERON:0004872!2.96e-18!84;UBERON:0004535!1.48e-16!110;UBERON:0001009!6.38e-16!113;UBERON:0001981!7.57e-16!60;UBERON:0007500!7.57e-16!60;UBERON:0004537!7.57e-16!60;UBERON:0006965!7.57e-16!60;UBERON:0001473!4.17e-14!8;UBERON:0004536!4.17e-14!8;UBERON:0006558!4.17e-14!8;UBERON:0003914!1.28e-12!118;UBERON:0004111!9.38e-12!241;UBERON:0001915!2.57e-11!3;UBERON:0001982!2.57e-11!3;UBERON:0002465!3.82e-11!10;UBERON:0000477!8.59e-10!286;UBERON:0001638!1.41e-09!9;UBERON:0003920!1.41e-09!9;UBERON:0004582!1.41e-09!9;UBERON:0000025!3.13e-09!194;UBERON:0000074!4.62e-08!7;UBERON:0001229!4.62e-08!7;UBERON:0001230!4.62e-08!7;UBERON:0005749!4.62e-08!7;UBERON:0004199!4.62e-08!7;UBERON:0004209!4.62e-08!7;UBERON:0004198!4.62e-08!7;UBERON:0005800!5.05e-08!2;UBERON:0001515!5.05e-08!2;UBERON:0002066!9.63e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.96e-93;18!UBERON:0001986;9.96e-93;18!UBERON:0004852;9.96e-93;18!UBERON:0000487;2.57e-75;22!UBERON:0006914;6.53e-66;25!UBERON:0003915;1.39e-46;9!UBERON:0004700;1.39e-46;9!UBERON:0001917;1.39e-46;9!UBERON:0000490;5.30e-44;33!UBERON:0007500;3.02e-21;56!UBERON:0001981;3.02e-21;56!UBERON:0004537;3.02e-21;56!UBERON:0010523;3.37e-21;3!UBERON:0001915;3.37e-21;3!UBERON:0001982;3.37e-21;3!UBERON:0001638;8.03e-19;9!UBERON:0003920;8.03e-19;9!UBERON:0004582;8.03e-19;9!UBERON:0000055;3.11e-18;65!UBERON:0005800;1.12e-14;2!UBERON:0001515;1.12e-14;2!UBERON:0003914;1.12e-14;74!UBERON:0002066;1.19e-12;5!UBERON:0002049;1.46e-11;75!UBERON:0007798;1.46e-11;75!UBERON:0000025;1.58e-10;93!UBERON:0000074;1.48e-09;7!UBERON:0001229;1.48e-09;7!UBERON:0001637;2.14e-09;42!UBERON:0003509;2.14e-09;42!UBERON:0004572;2.14e-09;42!UBERON:0000947;8.02e-08;21!UBERON:0010191;8.02e-08;21!UBERON:0001009;1.11e-07;112!UBERON:0000353;1.25e-07;15!UBERON:0004111;1.98e-07;130!UBERON:0010260;3.08e-07;9!UBERON:0004535;8.88e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.14e-93,18;UBERON:0001986,5.14e-93,18;UBERON:0004852,5.14e-93,18;UBERON:0000487,1.50e-75,22;UBERON:0006914,4.07e-66,25;UBERON:0003915,1.09e-46,9;UBERON:0004700,1.09e-46,9;UBERON:0001917,1.09e-46,9;UBERON:0000055,4.49e-32,68;UBERON:0007500,7.68e-30,59;UBERON:0001981,7.68e-30,59;UBERON:0004537,7.68e-30,59;UBERON:0006965,7.68e-30,59;UBERON:0002049,1.76e-27,78;UBERON:0007798,1.76e-27,78;UBERON:0010523,2.57e-21,3;UBERON:0001915,2.57e-21,3;UBERON:0001982,2.57e-21,3;UBERON:0004872,3.14e-20,83;UBERON:0003914,2.51e-19,117;UBERON:0001638,7.19e-19,9;UBERON:0003920,7.19e-19,9;UBERON:0004582,7.19e-19,9;UBERON:0004535,1.37e-18,109;UBERON:0001009,5.43e-18,112;UBERON:0005800,1.20e-14,2;UBERON:0001515,1.20e-14,2;UBERON:0002066,1.19e-12,5;UBERON:0000025,2.19e-11,192;UBERON:0004111,1.97e-10,240;UBERON:0000490,7.45e-10,148;UBERON:0010532,1.69e-09,7;UBERON:0000074,1.69e-09,7;UBERON:0001229,1.69e-09,7;UBERON:0001230,1.69e-09,7;UBERON:0003220,1.69e-09,7;UBERON:0005749,1.69e-09,7;UBERON:0004199,1.69e-09,7;UBERON:0004209,1.69e-09,7;UBERON:0004198,1.69e-09,7;UBERON:0003081,2.19e-09,203;UBERON:0001637,3.89e-09,42;UBERON:0003509,3.89e-09,42;UBERON:0004572,3.89e-09,42;UBERON:0005103,2.29e-08,8;UBERON:0000083,2.29e-08,8;UBERON:0009201,2.29e-08,8;UBERON:0006553,2.29e-08,8;UBERON:0003074,2.29e-08,8;UBERON:0003060,2.29e-08,8;UBERON:0000947,7.84e-08,21;UBERON:0010191,7.84e-08,21;UBERON:0000353,1.37e-07,15;UBERON:0000080,1.75e-07,9;UBERON:0002120,1.75e-07,9;UBERON:0004875,1.75e-07,9;UBERON:0005721,1.75e-07,9;UBERON:0005754,1.75e-07,9;UBERON:0007297,1.75e-07,9;UBERON:0010260,3.08e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58391129576717,0.860234595106124,2.42998351125316,2.26123176769604,2.09749718104953,3.85165258716094,3.34391946458897,0.516833518338658,0.71153252537342,0.66944122552934,4.43112248820062,6.0821768457481,1.95249646038536,3.30896772311282,3.24056779152704,1.60739510911344,3.81699933464489,3.0405099730497,0,4.74632829784064,4.946447086121,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42893272774789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16549671641611,1.38895653772983,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.68666920354483,4.08224892663638,0.431831832204279,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39705560002972,1.1490322207942,1.69338866179106,3.24621940274555,1.12318871245384,0,0,0,1.69291777801603,0,0,0,0,0,0,0,0,0,0,2.43410110628385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0.19606253431774,0,0,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:139543445..139543462,+ | |||
}} |
Revision as of 04:09, 23 January 2014
Short description: | p@chr9:139543445..139543462, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:139543445..139543462, + |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 5.14e-93 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.14e-93 | 18 |
endothelial cell of vascular tree | 2.93e-87 | 24 |
endothelial cell | 9.44e-87 | 36 |
meso-epithelial cell | 1.37e-68 | 45 |
lining cell | 2.71e-52 | 58 |
barrier cell | 2.71e-52 | 58 |
endothelial cell of artery | 1.09e-46 | 9 |
vein endothelial cell | 2.33e-28 | 6 |
aortic endothelial cell | 7.59e-28 | 6 |
squamous epithelial cell | 2.44e-24 | 63 |
mesodermal cell | 7.15e-23 | 121 |
capillary endothelial cell | 2.57e-21 | 3 |
endothelial cell of umbilical vein | 1.07e-20 | 3 |
thoracic aorta endothelial cell | 1.20e-14 | 2 |
glomerular endothelial cell | 4.19e-13 | 5 |
glomerular cell | 1.69e-09 | 7 |
kidney corpuscule cell | 1.69e-09 | 7 |
embryonic cell | 9.68e-09 | 250 |
epithelial cell | 1.09e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.79e-09 | 31 |
leukemia | 2.29e-07 | 39 |