FFCP PHASE1:Hg19::chrX:47442857..47442871,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7076 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11820 | |||
|TSSclassifier=strong | |||
|UniProt=Q6FGX5 | |||
|association_with_transcript=42bp_to_CR407638,CR541982_5end | |||
|coexpression_cluster_id=C609 | |||
|description=CAGE_peak_5_at_TIMP1_5end | |||
|id=chrX:47442857..47442871,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.17e-23!180;CL:0000048!2.34e-22!430;CL:0000723!2.32e-21!436;CL:0000034!7.66e-20!444;CL:0000680!9.42e-15!57;CL:0000056!9.42e-15!57;CL:0000355!9.42e-15!57;CL:0002371!1.28e-14!591;CL:0000057!1.91e-14!75;CL:0000187!9.79e-14!54;CL:0000183!1.03e-13!59;CL:0000144!1.55e-12!625;CL:0002320!2.70e-12!365;CL:0000393!7.66e-12!60;CL:0000211!7.66e-12!60;CL:0000192!2.15e-11!42;CL:0000514!2.15e-11!42;CL:0000134!5.33e-11!358;CL:0002057!1.09e-10!42;CL:0000860!1.32e-10!45;CL:0000359!2.77e-09!32;CL:0002494!1.68e-08!16;CL:0000548!3.04e-08!679;CL:0000004!3.04e-08!679;CL:0000255!3.04e-08!679;CL:0000012!4.25e-08!682;CL:0002009!1.18e-07!65;CL:0002194!1.21e-07!63;CL:0000576!1.21e-07!63;CL:0000040!1.21e-07!63;CL:0000559!1.21e-07!63;CL:0000219!1.34e-07!390;CL:0000557!2.47e-07!71;CL:0002334!2.58e-07!12;CL:0000839!4.02e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.29e-12;33!CL:0002057;4.29e-12;33!CL:0000359;5.12e-11;32!CL:0002494;2.18e-10;16!CL:0000192;7.51e-10;43!CL:0000473;5.61e-09;39!CL:0000234;5.61e-09;39!CL:0002334;6.68e-09;12!CL:0000187;1.77e-08;55!CL:0000723;3.39e-07;61!CL:0000048;3.97e-07;58!CL:0000134;3.99e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.31e-28,427;CL:0000723,1.88e-27,433;CL:0000034,5.32e-26,441;CL:0000057,1.89e-17,76;CL:0002320,7.37e-17,361;CL:0000680,9.69e-16,58;CL:0000056,9.69e-16,58;CL:0000355,9.69e-16,58;CL:0000134,4.12e-15,354;CL:0000187,1.74e-14,55;CL:0000192,1.19e-12,43;CL:0000514,1.19e-12,43;CL:0000393,3.90e-12,61;CL:0000211,3.90e-12,61;CL:0000359,2.27e-11,32;CL:0000219,1.24e-10,386;CL:0002494,1.87e-10,16;CL:0000860,8.91e-10,42;CL:0002057,8.91e-10,42;CL:0002334,6.15e-09,12;CL:0000473,6.86e-09,48;CL:0000234,6.86e-09,48 | |||
|ontology_enrichment_development_v019=CL:0000514;7.51e-10;43!CL:0000355;3.81e-08;58!CL:0002057;1.04e-07;42 | |||
|ontology_enrichment_disease=DOID:2394!2.89e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.68e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.40e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.09e-21!167;UBERON:0000926!7.76e-18!448;UBERON:0004120!7.76e-18!448;UBERON:0006603!7.76e-18!448;UBERON:0000914!3.67e-14!83;UBERON:0002329!3.67e-14!83;UBERON:0003077!3.67e-14!83;UBERON:0003059!3.67e-14!83;UBERON:0007282!3.67e-14!83;UBERON:0009618!3.67e-14!83;UBERON:0007285!3.67e-14!83;UBERON:0004290!9.11e-14!70;UBERON:0001134!2.34e-13!61;UBERON:0002036!2.34e-13!61;UBERON:0003082!2.34e-13!61;UBERON:0002385!4.73e-13!63;UBERON:0001015!4.73e-13!63;UBERON:0000383!4.73e-13!63;UBERON:0002384!1.43e-12!375;UBERON:0003081!1.19e-11!216;UBERON:0004872!1.55e-10!84;UBERON:0000486!3.28e-10!82;UBERON:0005256!5.61e-10!143;UBERON:0000948!7.31e-09!24;UBERON:0005498!7.31e-09!24;UBERON:0004140!7.31e-09!24;UBERON:0009881!7.31e-09!24;UBERON:0004141!7.31e-09!24;UBERON:0003084!7.31e-09!24;UBERON:0007005!7.31e-09!24;UBERON:0004139!7.31e-09!24;UBERON:0004291!7.31e-09!24;UBERON:0001637!7.61e-09!42;UBERON:0003509!7.61e-09!42;UBERON:0004572!7.61e-09!42;UBERON:0007100!1.22e-08!27;UBERON:0004765!3.07e-08!101;UBERON:0001434!3.07e-08!101;UBERON:0004573!3.48e-08!33;UBERON:0004571!3.48e-08!33;UBERON:0001474!1.58e-07!86;UBERON:0000468!1.71e-07!659;UBERON:0002371!1.96e-07!80;UBERON:0003914!2.13e-07!118;UBERON:0002100!9.14e-07!216;UBERON:0000480!9.64e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.29e-10;33!UBERON:0004571;4.29e-10;33!UBERON:0000948;2.32e-09;22!UBERON:0007100;4.51e-09;25!UBERON:0001637;1.83e-07;42!UBERON:0003509;1.83e-07;42!UBERON:0004572;1.83e-07;42!UBERON:0001013;4.53e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.99e-21,315;UBERON:0004120,1.99e-21,315;UBERON:0006603,1.99e-21,315;UBERON:0002204,7.93e-20,167;UBERON:0002384,2.39e-16,371;UBERON:0002329,2.00e-15,71;UBERON:0003059,2.00e-15,71;UBERON:0007282,2.00e-15,71;UBERON:0004290,2.00e-15,71;UBERON:0009618,2.00e-15,71;UBERON:0007524,2.48e-15,73;UBERON:0003077,6.17e-15,72;UBERON:0007285,6.17e-15,72;UBERON:0001134,8.35e-15,62;UBERON:0002036,8.35e-15,62;UBERON:0003082,8.35e-15,62;UBERON:0007503,2.48e-14,78;UBERON:0002385,8.74e-14,64;UBERON:0001015,8.74e-14,64;UBERON:0000383,8.74e-14,64;UBERON:0000486,4.55e-12,83;UBERON:0005256,4.78e-12,122;UBERON:0004573,2.31e-11,33;UBERON:0004571,2.31e-11,33;UBERON:0004872,7.15e-11,83;UBERON:0001637,9.36e-11,42;UBERON:0003509,9.36e-11,42;UBERON:0004572,9.36e-11,42;UBERON:0003081,1.49e-10,203;UBERON:0000948,1.82e-10,24;UBERON:0005498,1.82e-10,24;UBERON:0004140,1.82e-10,24;UBERON:0009881,1.82e-10,24;UBERON:0004141,1.82e-10,24;UBERON:0003084,1.82e-10,24;UBERON:0007005,1.82e-10,24;UBERON:0004139,1.82e-10,24;UBERON:0004291,1.82e-10,24;UBERON:0007100,4.05e-10,27;UBERON:0003104,1.59e-09,160;UBERON:0009142,1.59e-09,160;UBERON:0003914,1.04e-08,117;UBERON:0000479,6.87e-08,773;UBERON:0000490,8.42e-08,148;UBERON:0001009,3.29e-07,112;UBERON:0002100,3.64e-07,199;UBERON:0004535,4.44e-07,109;UBERON:0001013,5.51e-07,14;UBERON:0007500,9.97e-07,59;UBERON:0001981,9.97e-07,59;UBERON:0004537,9.97e-07,59;UBERON:0006965,9.97e-07,59 | |||
|phase1_expression=4.54195948176392,8.13581990785736,10.1487170949099,16.0117277365009,12.0679495495368,35.7658794881151,10.1319951267324,9.47579810140246,10.4474251279935,2.45733936501509,3.48900583986214,0.218441372130172,0.263766978228454,1.73272894144065,7.29074226601415,7.39557661096953,5.42425075221579,5.84248072309899,6.34312638427659,0.123121058076788,1.22400414746552,0.313454721478088,0,0.958120975510189,0.251085279189606,0.534893840235659,0.164201178899891,0.236132343941038,0,0.383829398097213,0.154816123316076,0.919421224478927,0.6024118375565,5.9160641626686,0,0,0,0.553995408531877,0.802177789880567,0.434021741431704,0.895661896959697,1.29557466407592,1.03030227053675,5.81592955118259,7.17964293008738,3.39617685662943,7.67015821788759,7.40102198439286,1.23882548358041,5.46615545412086,2.81776777182011,1.6553756092201,8.61864201841546,8.39130088658974,5.41705946377367,12.9887214284397,11.1891521523717,4.94391665779186,21.4258724659632,9.9487998393589,14.7047538933779,2.96866170168044,5.18605509816243,2.55734850319616,10.7377418292576,11.3477044938228,9.34233373493363,4.52247597462138,2.60741459210101,2.17188844705117,5.44859552370032,4.05105399586321,3.48108626184973,0.845021145247767,1.27562579979026,0.628975936525128,0.898629049171961,0.450530678524519,0.803627933485401,0.285012743741249,1.59133341759272,1.27864907635244,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0.83593247695339,0,0,0,0.779873198196215,0,0.221533894583621,0,0.768547918354051,0.520237390239513,0.328875809207352,0.829050053357545,0,0,0,0,0.453237370790265,0.383220493601921,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,19.5045493051169,37.5592481434036,2.81297636055767,1.44575660953827,2.50668955317945,3.62116297402059,3.9764297352555,11.1926020169606,0.283604451492204,2.4390233720882,0.87834785693126,0.392937226493138,0,0,0.649094787309367,0,0.132957960518865,0,0,0,0.198762407366705,1.72046919021225,0,0,0.419499436209906,0.825354125820202,0.626984899610432,0.258416759169329,0,0.33472061276467,0.805658634218294,1.52054421143703,0,0,0,0.446498641420399,0.44905874525234,0.225222960966644,0,0,0.183201743930407,0,0,0,9.44246708221105,3.29239330327907,1.19168262731897,21.2259099354122,3.54668382198357,6.16745360156538,1.06748995729705,2.96001058100592,5.91300967259556,5.52313755485721,13.5673379584171,0.454072282934794,5.18558332031999,0.70296429550139,2.18512053781224,1.1409436430889,4.63290909710583,2.11382097558777,0.485618833104395,1.54495887372473,1.42907919878425,1.35117749042945,2.89312187292143,8.31602000097437,9.1488763833066,7.28129089550421,14.3723628363248,0.505008341862199,1.12606667884768,0.277064115484183,4.82875382968922,9.50112166976961,14.2726155961267,2.94923676216055,2.87023417102179,1.92201649936711,2.54318281391474,4.80145753735044,6.18315175430633,1.8034837803194,2.04728541964749,1.35021065793013,2.92311015483596,1.51460264546469,2.39329736469978,6.46584227275248,6.39017266529906,2.61955455391865,1.69560592310488,0.193260853163297,0,0,0.243947412259191,0,0.116193942869518,0.10366105501537,0,0.36497735907583,3.12899064659632,1.92972281457866,0,2.78620756819187,4.33127689001751,1.0647612003586,0.337169380156203,0.723033089650446,1.10293972732394,0.435758888184812,0.474541238222193,0.404493924480493,0.588664395376038,0.38474715694639,0,7.01208869017229,3.7041661019826,2.94017422771084,0,0,4.72631925345123,0,0.122988438543114,3.60292401626904,0.109750285408626,2.24803506515239,0.301586917234893,0.0925884451585296,0,2.07986957055916,1.44331342025273,0.463721619900307,1.6437217193015,0.288732895522148,0,0.761016608938393,0,0,0,0.702012795417713,1.0404181360211,0.93733833986777,0.16798212819886,0.283550194484773,0.179117045405697,0,0.383382679165211,2.46331618947972,0.528290604079356,0.829312462163088,0.576479813667846,1.2624243342638,0.190493682876507,1.14596527667483,0,1.71072446022705,0.925447434329912,0.600686115687835,0.571652865261156,0.448524337381443,2.1798003441664,0.51336800074665,7.36848779819333,0,16.060752298564,0,1.04007436911366,0.771622122786426,0,3.19706614819319,3.71742783511184,1.08524321078289,3.29296134712308,5.21177894869976,3.19852753868291,11.087326221068,0,1.74306691720059,1.69954085009497,1.2162378064119,0.502257091432126,4.21667878966063,0.479249710983165,0,2.85273810081437,5.06734573336527,18.4928690295345,1.61154866915906,0,0.394061520403854,0.215627574859517,0.256686072559497,1.27047312111232,0,0,0.335032530668698,1.91381625495949,1.49801404789436,2.99161459204025,0.828831026872071,1.96306386750624,5.50187573165645,2.71265023699736,1.87173775377726,5.17444067511769,0.630809660135739,4.33423235473039,14.4454127869305,77.3185513790349,11.3820378421755,0,2.39679919104214,4.17041349446798,1.37060810223918,2.40200396667599,0.206768026122887,1.07857100409308,0.533637789017222,0.606255142892519,1.66435439510497,0.907170879989041,14.3902528534891,3.22270143904931,18.8042263270159,28.703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| |||
|short_description=p5@TIMP1 | |||
}} |
Revision as of 05:31, 23 January 2014
Short description: | p5@TIMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TIMP1_5end |
Coexpression cluster: | C609_Smooth_mesenchymal_Preadipocyte_Cardiac_Fibroblast_Osteoblast_tenocyte |
Association with transcript: | 42bp_to_CR407638, CR541982_5end |
EntrezGene: | TIMP1 |
HGNC: | 11820 |
UniProt: | Q6FGX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.31e-28 | 427 |
somatic stem cell | 1.88e-27 | 433 |
stem cell | 5.32e-26 | 441 |
fibroblast | 1.89e-17 | 76 |
connective tissue cell | 7.37e-17 | 361 |
muscle precursor cell | 9.69e-16 | 58 |
myoblast | 9.69e-16 | 58 |
multi-potent skeletal muscle stem cell | 9.69e-16 | 58 |
mesenchymal cell | 4.12e-15 | 354 |
muscle cell | 1.74e-14 | 55 |
smooth muscle cell | 1.19e-12 | 43 |
smooth muscle myoblast | 1.19e-12 | 43 |
electrically responsive cell | 3.90e-12 | 61 |
electrically active cell | 3.90e-12 | 61 |
vascular associated smooth muscle cell | 2.27e-11 | 32 |
motile cell | 1.24e-10 | 386 |
cardiocyte | 1.87e-10 | 16 |
classical monocyte | 8.91e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.91e-10 | 42 |
preadipocyte | 6.15e-09 | 12 |
defensive cell | 6.86e-09 | 48 |
phagocyte | 6.86e-09 | 48 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.40e-09 | 14 |