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FFCP PHASE1:Mm9::chr2:118855128..118855131,-: Difference between revisions

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{{FFCP|EntrezGene=269336|HGNC=|UniProt=Q3UHY7,Q8BS39|association_with_transcript=0bp_to_ENSMUST00000036470,ENSMUST00000110834,NM_199310,uc008lsx.2_5end|description=CAGE_peak_3_at_Ccdc32_5end|id=chr2:118855128..118855131,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.61e-14!71;UBERON:0003075!1.61e-14!71;UBERON:0007284!1.61e-14!71;UBERON:0000033!1.35e-12!63;UBERON:0001049!2.84e-12!52;UBERON:0005068!2.84e-12!52;UBERON:0006241!2.84e-12!52;UBERON:0007135!2.84e-12!52;UBERON:0004121!8.49e-12!102;UBERON:0000924!8.49e-12!102;UBERON:0006601!8.49e-12!102;UBERON:0003056!9.78e-12!49;UBERON:0000955!7.94e-11!50;UBERON:0006238!7.94e-11!50;UBERON:0002020!1.32e-10!34;UBERON:0002616!2.72e-10!49;UBERON:0003080!6.32e-10!40;UBERON:0000073!1.60e-09!75;UBERON:0001016!1.60e-09!75;UBERON:0001017!1.69e-09!73;UBERON:0005743!1.69e-09!73;UBERON:0002780!2.34e-09!39;UBERON:0001890!2.34e-09!39;UBERON:0006240!2.34e-09!39;UBERON:0002791!3.26e-09!29;UBERON:0003528!3.26e-09!29;UBERON:0001893!3.26e-09!29;UBERON:0000956!6.25e-08!21;UBERON:0001869!6.25e-08!21;UBERON:0000203!6.25e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.02e-18,64;UBERON:0003075,1.02e-18,64;UBERON:0007284,1.02e-18,64;UBERON:0001049,1.76e-17,52;UBERON:0005068,1.76e-17,52;UBERON:0006241,1.76e-17,52;UBERON:0007135,1.76e-17,52;UBERON:0000073,2.36e-17,54;UBERON:0010314,1.09e-16,92;UBERON:0003056,1.67e-15,49;UBERON:0000955,2.66e-15,47;UBERON:0006238,2.66e-15,47;UBERON:0010371,1.55e-14,73;UBERON:0002616,1.81e-14,46;UBERON:0001016,8.76e-14,75;UBERON:0001017,8.89e-14,73;UBERON:0002020,8.98e-14,34;UBERON:0004121,1.40e-13,95;UBERON:0000924,1.40e-13,95;UBERON:0006601,1.40e-13,95;UBERON:0003080,8.80e-13,40;UBERON:0002780,6.15e-12,39;UBERON:0001890,6.15e-12,39;UBERON:0006240,6.15e-12,39;UBERON:0003528,1.01e-11,29;UBERON:0002791,1.01e-11,29;UBERON:0001893,1.01e-11,29;UBERON:0000956,1.39e-10,21;UBERON:0001869,1.39e-10,21;UBERON:0000203,1.39e-10,21;UBERON:0002619,2.53e-08,17;UBERON:0004111,2.77e-08,122;UBERON:0000025,3.12e-08,114;UBERON:0002021,4.23e-08,10;UBERON:0000411,4.23e-08,10;UBERON:0001950,4.23e-08,10|phase1_expression=0.960893082628764,0.348975407639361,0,0,0,0.503637815735669,0.233612640595526,0.387369970324729,0,0,0.34243593645101,0.558405112967355,0.342401459862411,0.611942816932982,0,0.404950534779652,0.699561878128147,0.788655413395594,0.411343300817216,0,0.850432901510698,0.695036658406197,1.04479915655574,0.47997726838022,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,2.3440060335714,1.0470474879476,0.588231488031014,1.36609096991689,0.971020706062307,2.26614272356039,0.912392380975631,1.28482726513177,0,0.218025156380447,0.659058548203415,0.972149495371417,1.1198913730029,0,0.335565212115473,0,0,1.28629718017973,1.14613375975503,1.03134418455488,0.809265843438391,0.528990979272033,1.26766280701236,0.677689064138264,0,1.3498495759221,0,0.7104801149461,1.19840044207362,0,1.14058573539325,1.4850653216486,1.05162480675691,1.42825492201902,1.76694832761291,1.22490799214954,1.34183659425531,0,0,1.53224805702225,1.38245879930619,0.527545150920775,1.28082701043374,2.08365348222704,2.79182999001381,0.56276261003168,1.06958773443767,2.35702868378934,1.28134512719193,0.559198337475902,0.530083353332288,1.13357340160178,1.15945795480671,0.860423876981386,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,2.47337702157238,0.845060518660083,1.28326477414318,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,1.1875371125186,1.04091196059682,0.913396434936424,1.15307748628029,1.50722640552623,0.940709657085638,1.13099932196708,0.988779870937496,0.578397427679647,0.884610551949874,0.808834249737046,0.441683036920787,0.969750506270444,0,1.46390398505774,1.67557365450764,1.02182822083437,0.11981512450592,0,1.27070227073065,2.84602214869163,0.915001205637253,2.01046963380583,2.9550134432687,3.06858548796397,2.70124457927428,2.10913641988085,1.83310854930569,0.870848794270651,0.252722758433675,0.420883711772948,1.04096354370163,1.37941262660084,1.0803727788321,1.80845781402858,0.612328492361951,1.15302348256365,1.78033276663485,2.06962696591213,0.646703978798527,0.189106080167819,1.23165786914764,0.657587197282725,0.556094498451196,0.696504333044333,0.411564272815887,0.199034266818493,0.702213187313235,0.772043721344145,1.70498099637356,0.621377317606506,0.234526059981096,0.540186184383045,1.42046841351126,0.787056926989615,0.617068451549513,0.232533944750408,0.804820204198858,0.934122738937356,1.48103864922132,0.32833492815819,0.729619285912702,1.31579988682799,0.878200461164203,0.939444931322602,2.73376933133365,2.6755199218614,0,0.264450566663544,0,0,0.515469845288373,1.00841762311671,0.667134131534611,0.760902504450237,0,0.823494773620054,0.502670417600539,1.1937388322469,0.58489226135736,0.898819408654221,0.4322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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:269336
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q3UHY7,uniprot:Q8BS39
|association_with_transcript=0bp_to_ENSMUST00000036470,ENSMUST00000110834,NM_199310,uc008lsx.2_5end
|cluster_id=chr2:118855128..118855131,-
|description=CAGE_peak_3_at_Ccdc32_5end
|id=chr2:118855128..118855131,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.61e-14!71;UBERON:0003075!1.61e-14!71;UBERON:0007284!1.61e-14!71;UBERON:0000033!1.35e-12!63;UBERON:0001049!2.84e-12!52;UBERON:0005068!2.84e-12!52;UBERON:0006241!2.84e-12!52;UBERON:0007135!2.84e-12!52;UBERON:0004121!8.49e-12!102;UBERON:0000924!8.49e-12!102;UBERON:0006601!8.49e-12!102;UBERON:0003056!9.78e-12!49;UBERON:0000955!7.94e-11!50;UBERON:0006238!7.94e-11!50;UBERON:0002020!1.32e-10!34;UBERON:0002616!2.72e-10!49;UBERON:0003080!6.32e-10!40;UBERON:0000073!1.60e-09!75;UBERON:0001016!1.60e-09!75;UBERON:0001017!1.69e-09!73;UBERON:0005743!1.69e-09!73;UBERON:0002780!2.34e-09!39;UBERON:0001890!2.34e-09!39;UBERON:0006240!2.34e-09!39;UBERON:0002791!3.26e-09!29;UBERON:0003528!3.26e-09!29;UBERON:0001893!3.26e-09!29;UBERON:0000956!6.25e-08!21;UBERON:0001869!6.25e-08!21;UBERON:0000203!6.25e-08!21
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.02e-18,64;UBERON:0003075,1.02e-18,64;UBERON:0007284,1.02e-18,64;UBERON:0001049,1.76e-17,52;UBERON:0005068,1.76e-17,52;UBERON:0006241,1.76e-17,52;UBERON:0007135,1.76e-17,52;UBERON:0000073,2.36e-17,54;UBERON:0010314,1.09e-16,92;UBERON:0003056,1.67e-15,49;UBERON:0000955,2.66e-15,47;UBERON:0006238,2.66e-15,47;UBERON:0010371,1.55e-14,73;UBERON:0002616,1.81e-14,46;UBERON:0001016,8.76e-14,75;UBERON:0001017,8.89e-14,73;UBERON:0002020,8.98e-14,34;UBERON:0004121,1.40e-13,95;UBERON:0000924,1.40e-13,95;UBERON:0006601,1.40e-13,95;UBERON:0003080,8.80e-13,40;UBERON:0002780,6.15e-12,39;UBERON:0001890,6.15e-12,39;UBERON:0006240,6.15e-12,39;UBERON:0003528,1.01e-11,29;UBERON:0002791,1.01e-11,29;UBERON:0001893,1.01e-11,29;UBERON:0000956,1.39e-10,21;UBERON:0001869,1.39e-10,21;UBERON:0000203,1.39e-10,21;UBERON:0002619,2.53e-08,17;UBERON:0004111,2.77e-08,122;UBERON:0000025,3.12e-08,114;UBERON:0002021,4.23e-08,10;UBERON:0000411,4.23e-08,10;UBERON:0001950,4.23e-08,10
|phase1_expression=0.960893082628764,0.348975407639361,0,0,0,0.503637815735669,0.233612640595526,0.387369970324729,0,0,0.34243593645101,0.558405112967355,0.342401459862411,0.611942816932982,0,0.404950534779652,0.699561878128147,0.788655413395594,0.411343300817216,0,0.850432901510698,0.695036658406197,1.04479915655574,0.47997726838022,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,2.3440060335714,1.0470474879476,0.588231488031014,1.36609096991689,0.971020706062307,2.26614272356039,0.912392380975631,1.28482726513177,0,0.218025156380447,0.659058548203415,0.972149495371417,1.1198913730029,0,0.335565212115473,0,0,1.28629718017973,1.14613375975503,1.03134418455488,0.809265843438391,0.528990979272033,1.26766280701236,0.677689064138264,0,1.3498495759221,0,0.7104801149461,1.19840044207362,0,1.14058573539325,1.4850653216486,1.05162480675691,1.42825492201902,1.76694832761291,1.22490799214954,1.34183659425531,0,0,1.53224805702225,1.38245879930619,0.527545150920775,1.28082701043374,2.08365348222704,2.79182999001381,0.56276261003168,1.06958773443767,2.35702868378934,1.28134512719193,0.559198337475902,0.530083353332288,1.13357340160178,1.15945795480671,0.860423876981386,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,2.47337702157238,0.845060518660083,1.28326477414318,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,1.1875371125186,1.04091196059682,0.913396434936424,1.15307748628029,1.50722640552623,0.940709657085638,1.13099932196708,0.988779870937496,0.578397427679647,0.884610551949874,0.808834249737046,0.441683036920787,0.969750506270444,0,1.46390398505774,1.67557365450764,1.02182822083437,0.11981512450592,0,1.27070227073065,2.84602214869163,0.915001205637253,2.01046963380583,2.9550134432687,3.06858548796397,2.70124457927428,2.10913641988085,1.83310854930569,0.870848794270651,0.252722758433675,0.420883711772948,1.04096354370163,1.37941262660084,1.0803727788321,1.80845781402858,0.612328492361951,1.15302348256365,1.78033276663485,2.06962696591213,0.646703978798527,0.189106080167819,1.23165786914764,0.657587197282725,0.556094498451196,0.696504333044333,0.411564272815887,0.199034266818493,0.702213187313235,0.772043721344145,1.70498099637356,0.621377317606506,0.234526059981096,0.540186184383045,1.42046841351126,0.787056926989615,0.617068451549513,0.232533944750408,0.804820204198858,0.934122738937356,1.48103864922132,0.32833492815819,0.729619285912702,1.31579988682799,0.878200461164203,0.939444931322602,2.73376933133365,2.6755199218614,0,0.264450566663544,0,0,0.515469845288373,1.00841762311671,0.667134131534611,0.760902504450237,0,0.823494773620054,0.502670417600539,1.1937388322469,0.58489226135736,0.898819408654221,0.432276099749388,0.796565093017469,0.758671603812327,0.571242563048644,0,0.203651327845314,0.969762435838129,0.561086559122548,0.442655759869801,1.03327103585722,0.784993639206874,0.740382983530803,0.592905254174298,0.500535317148282,0.589676985339609,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.505157755894224,0.538192240565737,0,0.923765950833023,0.37898282354097,0.488894929326078,0.848725428875941,0.469380496577004,0.837531287209079,1.19021820443007,0.585400943573396,0.788175720530955,1.55025282754142,2.07291199254733,0.327726629431476,1.20879487306127,0.578596234326046,0,2.17562273527484,0.491764273019036,0.551873492609465,1.9266070798535,2.34423373184406,0.983609672260053,0.757412781613119,0.94652465824877,0,0,0.238968797952552,0.222798674082394,0.849229592366497,0.809621403349789,0.876767573733936,0.395287777946524,2.57057053137446,0.709700426041343,0.890328018336276,1.14020871547503,0.659880491890142,0,1.21390318077491,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0,1.45413491791002,0,0.316036757935816,0,1.03135543248187,0.340439605753788,1.26042765821917,0.646793418913773,0.428674070063185,0.532020700926821,1.07021290561242,0.658196082408484,2.13125464380219,0.938686832254841,0.847328283455281,0.441056796109924,0,0.807322133479528,0.542816324353403,0.596861720015682,0.656563598980245,0.291480836629851,2.59595422814714,0.854354403989263,0.82554747185289,1.11116716421827,1.31857919903284,0.27338845544205,0.915112692826091,1.01987057996313,0.279902904647316,0.690999869022119,1.90934123603023,0.316335993581135,0.609958401380546,0.756037385752609,0.836353184057875,0.436725127492355,0.674321731924103,0.495920734352016,0,0.518459893167171,1.24267862617385,0.56369293868419,0.747582730219894,1.82004339502807,0.583353565032143,0.645799117388655,1.18269287843545,0.938857909166032,0.651021924219751,0.629156066554265,0.241584120826006,0.288030006257865,0,1.01362607645082,0.410843828659309,0.649604114888975,0,0.198681354781265,0.360586348559907,0.295379054349154,0.504832249740738,0.381034033274999,0.201652370273681,0.584747284438515,0.384847366561318,0.467507608726276,0.226730383615211,0.443971906748129,0.538283139656854,0.503653849092235,1.9318959403219,0.375364950902364,0.183151624267265,0.214368379079066,1.00314420807073,3.3885110557024,3.22227665555024,1.14579102687879,2.57779773515531,1.37016503954128,2.2661816921691,0.675022500231806,3.60256962579376,3.17199686288943,2.07104124700728,0.518936737920883,0,0.853668028770671,0.486213434136588,0.419226325255965,0.919217542250071,1.11123363900808,0.824140228955577,0.64183841918363,2.27427490587418,0.760437899670719,0.754505365544305,0.468207537349412,0.89635213366817,0.574354689556133,0.952587382566147,0.811190281613988,0.578727661391115,0.412085900803307,1.03039244094078,1.37147700954166,0.887379030796687,0.953744759789284,0.726732083161643,0.846984423737976,0.507687647350059,1.09756783723664,0.789209134313529,0.950628796921032,0.561142271657738,0.949080144993393,0.591026894253381,0.409231043169689,1.08455788830176,0.964533054905707,1.24905288968973,0.935726433781634,0.859484216193193,1.14772999241306,1.98532277207564,0.927471342481686
|short_description=p3@Ccdc32
}}

Revision as of 20:15, 3 August 2015

Short description:p3@Ccdc32
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ccdc32_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000036470, ENSMUST00000110834, NM_199310, uc008lsx.2_5end
EntrezGene:269336
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ccdc32

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.02e-1864
neural plate1.02e-1864
presumptive neural plate1.02e-1864
neural tube1.76e-1752
neural rod1.76e-1752
future spinal cord1.76e-1752
neural keel1.76e-1752
regional part of nervous system2.36e-1754
structure with developmental contribution from neural crest1.09e-1692
pre-chordal neural plate1.67e-1549
brain2.66e-1547
future brain2.66e-1547
ecto-epithelium1.55e-1473
regional part of brain1.81e-1446
nervous system8.76e-1475
central nervous system8.89e-1473
gray matter8.98e-1434
ectoderm-derived structure1.40e-1395
ectoderm1.40e-1395
presumptive ectoderm1.40e-1395
anterior neural tube8.80e-1340
regional part of forebrain6.15e-1239
forebrain6.15e-1239
future forebrain6.15e-1239
brain grey matter1.01e-1129
regional part of telencephalon1.01e-1129
telencephalon1.01e-1129
cerebral cortex1.39e-1021
cerebral hemisphere1.39e-1021
pallium1.39e-1021
regional part of cerebral cortex2.53e-0817
anatomical conduit2.77e-08122
tube3.12e-08114
occipital lobe4.23e-0810
visual cortex4.23e-0810
neocortex4.23e-0810
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