FFCP PHASE1:Mm9::chr11:71564500..71564541,+: Difference between revisions
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{{FFCP|EntrezGene=216881|HGNC=|MCL_coexpression_id=1|UniProt=Q80XH4|association_with_transcript=18bp_to_ENSMUST00000108511,uc007jxw.1_5end|description=CAGE_peak_1_at_Wscd1_5end|id=chr11:71564500..71564541,+|ontology_enrichment_celltype=CL:0000117!6.54e-14!23;CL:0000337!6.54e-14!23;CL:0002319!3.83e-11!43;CL:0000221!5.37e-11!44;CL:0000133!5.37e-11!44;CL:0000540!9.79e-09!33;CL:0000047!9.79e-09!33;CL:0000031!9.79e-09!33;CL:0000404!9.79e-09!33;CL:0000055!1.76e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.39e-14,23;CL:0000337,2.39e-14,23;CL:0002319,9.13e-11,43;CL:0000221,1.26e-10,44;CL:0000133,1.26e-10,44;CL:0000540,2.71e-08,33;CL:0000047,2.71e-08,33;CL:0000031,2.71e-08,33;CL:0000404,2.71e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.26e-28!73;UBERON:0005743!6.26e-28!73;UBERON:0000073!1.50e-27!75;UBERON:0001016!1.50e-27!75;UBERON:0001049!3.31e-26!52;UBERON:0005068!3.31e-26!52;UBERON:0006241!3.31e-26!52;UBERON:0007135!3.31e-26!52;UBERON:0000033!1.41e-25!63;UBERON:0002346!1.67e-25!71;UBERON:0003075!1.67e-25!71;UBERON:0007284!1.67e-25!71;UBERON:0000955!8.14e-25!50;UBERON:0006238!8.14e-25!50;UBERON:0004121!2.53e-24!102;UBERON:0000924!2.53e-24!102;UBERON:0006601!2.53e-24!102;UBERON:0002616!3.16e-24!49;UBERON:0003056!9.06e-22!49;UBERON:0007811!6.15e-20!86;UBERON:0003080!4.75e-19!40;UBERON:0002020!1.88e-18!34;UBERON:0002780!2.09e-18!39;UBERON:0001890!2.09e-18!39;UBERON:0006240!2.09e-18!39;UBERON:0000153!5.88e-17!94;UBERON:0002791!3.04e-15!29;UBERON:0003528!3.04e-15!29;UBERON:0001893!3.04e-15!29;UBERON:0000025!5.03e-11!114;UBERON:0000956!9.50e-11!21;UBERON:0001869!9.50e-11!21;UBERON:0000203!9.50e-11!21;UBERON:0000468!4.92e-10!333;UBERON:0004111!1.35e-09!122;UBERON:0002619!5.08e-09!17;UBERON:0003076!1.09e-07!12;UBERON:0003057!1.09e-07!12;UBERON:0000475!2.29e-07!200;UBERON:0000922!2.36e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-28,54;UBERON:0002346,4.83e-28,64;UBERON:0003075,4.83e-28,64;UBERON:0007284,4.83e-28,64;UBERON:0001017,6.56e-28,73;UBERON:0001016,1.56e-27,75;UBERON:0001049,4.39e-27,52;UBERON:0005068,4.39e-27,52;UBERON:0006241,4.39e-27,52;UBERON:0007135,4.39e-27,52;UBERON:0004121,1.60e-24,95;UBERON:0000924,1.60e-24,95;UBERON:0006601,1.60e-24,95;UBERON:0000955,2.39e-23,47;UBERON:0006238,2.39e-23,47;UBERON:0010314,4.98e-23,92;UBERON:0002616,9.47e-23,46;UBERON:0010371,1.18e-22,73;UBERON:0003056,1.73e-22,49;UBERON:0003080,1.14e-19,40;UBERON:0002020,4.73e-19,34;UBERON:0002780,5.27e-19,39;UBERON:0001890,5.27e-19,39;UBERON:0006240,5.27e-19,39;UBERON:0003528,9.94e-16,29;UBERON:0002791,9.94e-16,29;UBERON:0001893,9.94e-16,29;UBERON:0000025,3.96e-11,114;UBERON:0000956,4.49e-11,21;UBERON:0001869,4.49e-11,21;UBERON:0000203,4.49e-11,21;UBERON:0004111,2.01e-09,122;UBERON:0002619,2.76e-09,17;UBERON:0003076,6.59e-08,12;UBERON:0003057,6.59e-08,12|phase1_expression=1.60148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.174840804837995,0.666219523631325,0.202475267389826,0,0,0,0,9.18467533631554,0,0,0.159992422793407,1.14704640533585,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0.577703239502549,1.82858109894342,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,3.9119567217402,16.133861572153,6.59058548203415,9.52706505463989,11.7588594165305,37.3756667348926,0,0,0,0,0.573066879877513,1.03134418455488,42.4864567805155,61.3629535955558,54.5095007015314,3.04960078862219,1.77858959222228,0.449949858640699,0,0,32.6564120465061,57.6327457982332,19.9084055632277,21.4659441947388,21.2428210964896,81.6961815394878,81.9422286930486,19.9660002720375,16.7729574281914,21.1420320920305,78.182275509566,78.910774936646,77.4176927611467,33.4991170834692,25.7080278522771,26.5665818983948,83.7548997004143,64.7177001536432,68.9120097473414,60.3988600221019,42.9962476013291,30.5695091153493,2.12033341332915,2.72057616384428,18.5513272769074,1.72084775396277,0,0,0,0,3.37066608316204,0,0,0,2.25349471642689,0,0,0,0,0,0,2.05530983494308,0.776813650941515,1.1875371125186,1.56136794089522,3.04465478312141,2.30615497256059,2.86373017049983,2.11659672844269,2.51333182659351,0.741584903203122,0.86759614151947,0.884610551949874,3.558870698843,2.20841518460394,0.969750506270444,0,39.5254075965589,39.3759808809296,1.02182822083437,0,0,0,56.0216991374037,57.1875753523283,23.120400788767,36.6769315605703,37.5901722275586,62.5442014124276,60.8404736504091,1.12023300235348,0.746441823660558,0.505445516867349,4.8401626853889,5.98554037628437,5.74755261083682,7.20248519221397,12.3577950625286,26.1260156741099,23.7010382526972,28.9538328889562,17.8505325809921,1.07783996466421,0.945530400839096,0.175951124163949,1.53437012699302,0.556094498451196,1.39300866608867,1.64625709126355,2.7864797354589,0,0,0,1.65700618028402,1.40715635988658,2.34080679899319,3.31442629819294,1.96764231747404,3.08534225774756,2.79040733700489,4.02410102099429,4.55384835231961,2.79751744852917,5.25335885053105,6.89084881139774,6.87139940899062,6.80605357402257,6.44190810049784,52.78277708959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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216881 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80XH4 | |||
|association_with_transcript=18bp_to_ENSMUST00000108511,uc007jxw.1_5end | |||
|cluster_id=chr11:71564500..71564541,+ | |||
|description=CAGE_peak_1_at_Wscd1_5end | |||
|id=chr11:71564500..71564541,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.54e-14!23;CL:0000337!6.54e-14!23;CL:0002319!3.83e-11!43;CL:0000221!5.37e-11!44;CL:0000133!5.37e-11!44;CL:0000540!9.79e-09!33;CL:0000047!9.79e-09!33;CL:0000031!9.79e-09!33;CL:0000404!9.79e-09!33;CL:0000055!1.76e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.39e-14,23;CL:0000337,2.39e-14,23;CL:0002319,9.13e-11,43;CL:0000221,1.26e-10,44;CL:0000133,1.26e-10,44;CL:0000540,2.71e-08,33;CL:0000047,2.71e-08,33;CL:0000031,2.71e-08,33;CL:0000404,2.71e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.26e-28!73;UBERON:0005743!6.26e-28!73;UBERON:0000073!1.50e-27!75;UBERON:0001016!1.50e-27!75;UBERON:0001049!3.31e-26!52;UBERON:0005068!3.31e-26!52;UBERON:0006241!3.31e-26!52;UBERON:0007135!3.31e-26!52;UBERON:0000033!1.41e-25!63;UBERON:0002346!1.67e-25!71;UBERON:0003075!1.67e-25!71;UBERON:0007284!1.67e-25!71;UBERON:0000955!8.14e-25!50;UBERON:0006238!8.14e-25!50;UBERON:0004121!2.53e-24!102;UBERON:0000924!2.53e-24!102;UBERON:0006601!2.53e-24!102;UBERON:0002616!3.16e-24!49;UBERON:0003056!9.06e-22!49;UBERON:0007811!6.15e-20!86;UBERON:0003080!4.75e-19!40;UBERON:0002020!1.88e-18!34;UBERON:0002780!2.09e-18!39;UBERON:0001890!2.09e-18!39;UBERON:0006240!2.09e-18!39;UBERON:0000153!5.88e-17!94;UBERON:0002791!3.04e-15!29;UBERON:0003528!3.04e-15!29;UBERON:0001893!3.04e-15!29;UBERON:0000025!5.03e-11!114;UBERON:0000956!9.50e-11!21;UBERON:0001869!9.50e-11!21;UBERON:0000203!9.50e-11!21;UBERON:0000468!4.92e-10!333;UBERON:0004111!1.35e-09!122;UBERON:0002619!5.08e-09!17;UBERON:0003076!1.09e-07!12;UBERON:0003057!1.09e-07!12;UBERON:0000475!2.29e-07!200;UBERON:0000922!2.36e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-28,54;UBERON:0002346,4.83e-28,64;UBERON:0003075,4.83e-28,64;UBERON:0007284,4.83e-28,64;UBERON:0001017,6.56e-28,73;UBERON:0001016,1.56e-27,75;UBERON:0001049,4.39e-27,52;UBERON:0005068,4.39e-27,52;UBERON:0006241,4.39e-27,52;UBERON:0007135,4.39e-27,52;UBERON:0004121,1.60e-24,95;UBERON:0000924,1.60e-24,95;UBERON:0006601,1.60e-24,95;UBERON:0000955,2.39e-23,47;UBERON:0006238,2.39e-23,47;UBERON:0010314,4.98e-23,92;UBERON:0002616,9.47e-23,46;UBERON:0010371,1.18e-22,73;UBERON:0003056,1.73e-22,49;UBERON:0003080,1.14e-19,40;UBERON:0002020,4.73e-19,34;UBERON:0002780,5.27e-19,39;UBERON:0001890,5.27e-19,39;UBERON:0006240,5.27e-19,39;UBERON:0003528,9.94e-16,29;UBERON:0002791,9.94e-16,29;UBERON:0001893,9.94e-16,29;UBERON:0000025,3.96e-11,114;UBERON:0000956,4.49e-11,21;UBERON:0001869,4.49e-11,21;UBERON:0000203,4.49e-11,21;UBERON:0004111,2.01e-09,122;UBERON:0002619,2.76e-09,17;UBERON:0003076,6.59e-08,12;UBERON:0003057,6.59e-08,12 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.174840804837995,0.666219523631325,0.202475267389826,0,0,0,0,9.18467533631554,0,0,0.159992422793407,1.14704640533585,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0.577703239502549,1.82858109894342,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,3.9119567217402,16.133861572153,6.59058548203415,9.52706505463989,11.7588594165305,37.3756667348926,0,0,0,0,0.573066879877513,1.03134418455488,42.4864567805155,61.3629535955558,54.5095007015314,3.04960078862219,1.77858959222228,0.449949858640699,0,0,32.6564120465061,57.6327457982332,19.9084055632277,21.4659441947388,21.2428210964896,81.6961815394878,81.9422286930486,19.9660002720375,16.7729574281914,21.1420320920305,78.182275509566,78.910774936646,77.4176927611467,33.4991170834692,25.7080278522771,26.5665818983948,83.7548997004143,64.7177001536432,68.9120097473414,60.3988600221019,42.9962476013291,30.5695091153493,2.12033341332915,2.72057616384428,18.5513272769074,1.72084775396277,0,0,0,0,3.37066608316204,0,0,0,2.25349471642689,0,0,0,0,0,0,2.05530983494308,0.776813650941515,1.1875371125186,1.56136794089522,3.04465478312141,2.30615497256059,2.86373017049983,2.11659672844269,2.51333182659351,0.741584903203122,0.86759614151947,0.884610551949874,3.558870698843,2.20841518460394,0.969750506270444,0,39.5254075965589,39.3759808809296,1.02182822083437,0,0,0,56.0216991374037,57.1875753523283,23.120400788767,36.6769315605703,37.5901722275586,62.5442014124276,60.8404736504091,1.12023300235348,0.746441823660558,0.505445516867349,4.8401626853889,5.98554037628437,5.74755261083682,7.20248519221397,12.3577950625286,26.1260156741099,23.7010382526972,28.9538328889562,17.8505325809921,1.07783996466421,0.945530400839096,0.175951124163949,1.53437012699302,0.556094498451196,1.39300866608867,1.64625709126355,2.7864797354589,0,0,0,1.65700618028402,1.40715635988658,2.34080679899319,3.31442629819294,1.96764231747404,3.08534225774756,2.79040733700489,4.02410102099429,4.55384835231961,2.79751744852917,5.25335885053105,6.89084881139774,6.87139940899062,6.80605357402257,6.44190810049784,52.7827770895959,29.3278145280961,0,0.793351699990633,1.06644125267617,2.78684006232526,1.15980715189884,1.4117846723634,0.444756087689741,0.951128130562796,0,2.47048432086016,1.50801125280162,1.98956472041151,1.9496408711912,2.69645822596266,1.29682829924817,0.796565093017469,4.1726938209678,3.54170389090159,5.63538678365402,7.73875045812194,7.17624202520215,8.90724912607046,13.4693824074668,7.97094799089852,8.94892748695836,6.91024117962083,0.296452627087149,0.500535317148282,0,0.224862112384854,0,0,0.50925170356284,0,0,0.549122826376163,1.43768206527355,1.86070473834252,0.936113019343682,0.505157755894224,0.179397413521912,0,14.5955020231618,1.70542270593436,1.62964976442026,3.22515662972857,4.69380496577004,5.3602002381381,7.61739650835244,9.17128144931655,7.72412206120336,9.30151696524855,10.5240147313941,19.0081445070256,16.577758259126,14.4649058581512,0,0,0.983528546038072,0,77.5459349641035,84.7440494061629,0,2.27223834483936,1.57754109708128,1.56175497718655,0.646270193198397,0.716906393857656,0.445597348164788,0.566153061577665,1.61924280669958,2.63030272120181,1.97643888973262,35.6666661228206,2.12910127812403,2.13678724400706,3.09485222771795,1.48473110675282,1.32745138339963,2.42780636154981,1.209294227859,1.88605079755898,2.36241514304618,1.53717573971964,2.32585463851399,3.27180356529755,2.49548164869305,0.948110273807448,0,2.06271086496374,5.7874732978144,5.58189391497062,8.66703181344455,8.57348140126369,10.995094485821,9.27517851530767,9.21474515371877,11.8741330154694,1.64270195644597,1.90648863777438,0.441056796109924,1.15420377059036,1.77610869365496,1.20625849856312,1.19372344003136,0.492422699235184,1.45740418314925,80.4745810725612,0.512612642393558,1.23832120777933,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,0,1.58167996790568,1.21991680276109,0.972048067396211,0.836353184057875,1.09181281873089,1.21377911746339,0.991841468704031,0.26175594198403,1.42576470620972,0.621339313086926,0.56369293868419,0.897099276263873,0.330916980914195,1.75006069509643,1.6790777052105,1.18269287843545,1.5256441023948,1.3020438484395,1.67774951081137,0.483168241652012,0.864090018773596,3.16011120628178,22.9079493277886,14.7903778317351,9.74406172333463,6.08690765269437,5.96044064343795,6.49055427407832,5.75989155980851,7.37055084621478,7.23964663222498,5.64626636766307,6.04238860586465,3.65604998233252,3.85693777199178,1.13365191807606,1.77588762699252,0.448569283047378,0.335769232728157,1.54551675225752,1.31377732815827,1.83151624267265,0.214368379079066,1.50471631210609,37.2736216127264,30.8417908459809,42.3942679945154,33.3395173746754,39.0497036269266,37.0143009720953,47.9265975164582,28.8205570063501,32.1731110378785,28.4768171463501,6.95375228813984,10.3746467084268,7.34154504742777,2.91728060481953,5.24032906569956,3.67687016900028,6.88964856185007,5.56294654545014,4.49286893428541,4.54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| |||
|short_description=p1@Wscd1 | |||
}} |
Revision as of 22:10, 3 August 2015
Short description: | p1@Wscd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Wscd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 18bp_to_ENSMUST00000108511, uc007jxw.1_5end |
EntrezGene: | 216881 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.39e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.39e-14 | 23 |
neural cell | 9.13e-11 | 43 |
ectodermal cell | 1.26e-10 | 44 |
neurectodermal cell | 1.26e-10 | 44 |
neuron | 2.71e-08 | 33 |
neuronal stem cell | 2.71e-08 | 33 |
neuroblast | 2.71e-08 | 33 |
electrically signaling cell | 2.71e-08 | 33 |