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FFCP PHASE1:Mm9::chr19:44482299..44482312,-: Difference between revisions

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{{FFCP|EntrezGene=20249|HGNC=|MCL_coexpression_id=3198|UniProt=P13516,Q547C4|association_with_transcript=-100bp_to_ENSMUST00000041331,NM_009127,uc008hpr.2_5end|description=CAGE_peak_7_at_Scd1_5end|id=chr19:44482299..44482312,-|ontology_enrichment_celltype=CL:0000221!9.22e-07!44;CL:0000133!9.22e-07!44|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.86e-14!102;UBERON:0000924!5.86e-14!102;UBERON:0006601!5.86e-14!102;UBERON:0000073!2.22e-11!75;UBERON:0001016!2.22e-11!75;UBERON:0001017!1.41e-10!73;UBERON:0005743!1.41e-10!73;UBERON:0004111!3.50e-10!122;UBERON:0000025!1.60e-09!114;UBERON:0000955!2.04e-08!50;UBERON:0006238!2.04e-08!50;UBERON:0000033!4.05e-08!63;UBERON:0001049!4.10e-08!52;UBERON:0005068!4.10e-08!52;UBERON:0006241!4.10e-08!52;UBERON:0007135!4.10e-08!52;UBERON:0002616!5.66e-08!49;UBERON:0002346!3.13e-07!71;UBERON:0003075!3.13e-07!71;UBERON:0007284!3.13e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.00e-15,95;UBERON:0000924,9.00e-15,95;UBERON:0006601,9.00e-15,95;UBERON:0001016,7.72e-12,75;UBERON:0010371,2.46e-11,73;UBERON:0001017,9.53e-11,73;UBERON:0000073,6.91e-10,54;UBERON:0004111,2.99e-09,122;UBERON:0000025,3.12e-09,114;UBERON:0001049,1.75e-08,52;UBERON:0005068,1.75e-08,52;UBERON:0006241,1.75e-08,52;UBERON:0007135,1.75e-08,52;UBERON:0000119,1.51e-07,176;UBERON:0000955,1.51e-07,47;UBERON:0006238,1.51e-07,47;UBERON:0003076,3.30e-07,12;UBERON:0003057,3.30e-07,12;UBERON:0002346,3.32e-07,64;UBERON:0003075,3.32e-07,64;UBERON:0007284,3.32e-07,64;UBERON:0002616,5.63e-07,46;UBERON:0000483,8.35e-07,174|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,2.36596624018678,2.87940310572051,0.42438965179803,1.02051948181284,0,0,0.319984845586813,0.68822784320151,0,0,0,0.190023419456374,0,0,1.90509202037889,0.61506478758457,0,0,0,0,0,0,0,0.588231488031014,0,0,0.503587271902309,0.506884656097573,0.550640256485045,3.9119567217402,2.18025156380447,1.97717564461025,2.3331587888914,4.61955191363696,0,5.36904339384756,0,0,0.257259436035947,0,0.515672092277442,1.01158230429799,0,1.26766280701236,3.38844532069132,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0.841299845405528,2.85650984403804,2.65042249141936,0.61245399607477,0.575072826109418,0,7.70811166995721,8.68273898979276,15.5142598588806,0.659431438650969,0.823388792421687,0.52091337055676,10.0505879640497,5.6276261003168,6.87592114995646,0.589257170947335,1.99320353118744,0.559198337475902,2.65041676666144,3.02286240427142,0,0.860423876981386,11.5595126730318,4.31762553310254,5.84798775702902,5.82434953226536,2.52799956237153,2.21559419351475,0.779358013808606,1.06001872353102,1.40843419776681,1.28326477414318,0,0,0.649473123033642,0,0,1.25602267690966,5.43769555659061,0.890652834388949,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0,1.75933227861546,0.247194967734374,4.19338135067744,0,0.808834249737046,0.883366073841574,0,0,1.46390398505774,3.35114730901528,0.255457055208591,0,0,0,5.99162557619291,4.57500602818627,0.753926112677186,3.99795936442236,3.06858548796397,4.1557608911912,5.19172041816825,0.101839363850316,0.870848794270651,3.53811861807145,9.89076722666428,0.650602214813519,0.229902104433473,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.281105173679186,0.517406741478031,2.37124792226126,0.567318240503458,0.879755620819744,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0,3.36463917702604,0.617427674275707,0,1.85115396664481,0.853153002140936,0.232236671860439,0.128867461322093,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,4.74324203339438,1.00107063429656,1.17935397067922,0.899448449539415,0.811440485554012,0.964708639009667,1.78238096246994,3.45235364940973,0.324270453550071,0,0,0,0,0.252578877947112,3.94674309748207,1.92977408545347,5.35784251483154,0.189491411770485,0,0,0.469380496577004,0.837531287209079,5.2369600994923,3.12213836572478,1.26108115284953,1.10732344824387,2.71073106717728,2.13022309130459,3.45369963731791,2.89298117163023,0,0,34.4234991113325,17.6599517635029,7.70642831941401,8.90808818100744,2.29508923527346,0,0.315508219416257,1.17131623288992,1.07711698866399,1.19484398976276,0.668396022247182,1.41538265394416,0.809621403349789,0.876767573733936,0,4.17717711348349,0.851640511249612,0.534196811001766,0.162886959353576,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,1.36175842301515,0.36012218806262,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.938686832254841,0.42366414172764,1.32317038832977,12.5313552235525,1.13025098687134,3.37752379597673,3.34242563208782,4.59594519286172,0,12.0526446306831,0.512612642393558,0,0.370389054739423,0,0.683471138605126,0.686334519619568,0,0,0,0.954670618015114,0.474503990371703,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0.26175594198403,0,1.24267862617385,0,0,0.330916980914195,0.194451188344048,0.516639293910924,0,0,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0,0,0.129920822977795,0,0.79472541912506,0,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,0.443971906748129,0.807424709485281,1.34307693091263,0.965947970160952,0.187682475451182,0.183151624267265,0.214368379079066,0,0,1.84130094602871,1.14579102687879,1.03111909406213,0,2.2661816921691,1.35004500046361,1.35096360967266,0.906284817968409,1.55328093525546,0.93408612825759,0,0.512200817262403,0,0.419226325255965,1.47074806760011,0.666740183404846,1.03017528619447,0.320919209591815,0.758091635291392,0.50695859978048,0.943131706930381,0.842773567228942,0.768301828858431,0.918967503289812,1.42888107384922,0.695305955669133,0.578727661391115,0,0.883193520806384,0.342869252385415,0.70990322463735,1.66905332963125,1.30811774969096,1.31753132581463,0.846146078916765,0.548783918618318,0.526139422875686,0.407412341537585,0,0.355905054372522,0.689531376628944,0.409231043169689,0.77468420592983,0,0.499621155875892,0.467863216890817,0.859484216193193,0,0.220591419119515,0.927471342481686|short_description=p7@Scd1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20249
|HGNC=
|MCL_coexpression_id=3198
|TSSclassifier=NA
|UniProt=uniprot:P13516,uniprot:Q547C4
|association_with_transcript=-100bp_to_ENSMUST00000041331,NM_009127,uc008hpr.2_5end
|cluster_id=chr19:44482299..44482312,-
|description=CAGE_peak_7_at_Scd1_5end
|id=chr19:44482299..44482312,-
|ontology_enrichment_celltype=CL:0000221!9.22e-07!44;CL:0000133!9.22e-07!44
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.86e-14!102;UBERON:0000924!5.86e-14!102;UBERON:0006601!5.86e-14!102;UBERON:0000073!2.22e-11!75;UBERON:0001016!2.22e-11!75;UBERON:0001017!1.41e-10!73;UBERON:0005743!1.41e-10!73;UBERON:0004111!3.50e-10!122;UBERON:0000025!1.60e-09!114;UBERON:0000955!2.04e-08!50;UBERON:0006238!2.04e-08!50;UBERON:0000033!4.05e-08!63;UBERON:0001049!4.10e-08!52;UBERON:0005068!4.10e-08!52;UBERON:0006241!4.10e-08!52;UBERON:0007135!4.10e-08!52;UBERON:0002616!5.66e-08!49;UBERON:0002346!3.13e-07!71;UBERON:0003075!3.13e-07!71;UBERON:0007284!3.13e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.00e-15,95;UBERON:0000924,9.00e-15,95;UBERON:0006601,9.00e-15,95;UBERON:0001016,7.72e-12,75;UBERON:0010371,2.46e-11,73;UBERON:0001017,9.53e-11,73;UBERON:0000073,6.91e-10,54;UBERON:0004111,2.99e-09,122;UBERON:0000025,3.12e-09,114;UBERON:0001049,1.75e-08,52;UBERON:0005068,1.75e-08,52;UBERON:0006241,1.75e-08,52;UBERON:0007135,1.75e-08,52;UBERON:0000119,1.51e-07,176;UBERON:0000955,1.51e-07,47;UBERON:0006238,1.51e-07,47;UBERON:0003076,3.30e-07,12;UBERON:0003057,3.30e-07,12;UBERON:0002346,3.32e-07,64;UBERON:0003075,3.32e-07,64;UBERON:0007284,3.32e-07,64;UBERON:0002616,5.63e-07,46;UBERON:0000483,8.35e-07,174
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,2.36596624018678,2.87940310572051,0.42438965179803,1.02051948181284,0,0,0.319984845586813,0.68822784320151,0,0,0,0.190023419456374,0,0,1.90509202037889,0.61506478758457,0,0,0,0,0,0,0,0.588231488031014,0,0,0.503587271902309,0.506884656097573,0.550640256485045,3.9119567217402,2.18025156380447,1.97717564461025,2.3331587888914,4.61955191363696,0,5.36904339384756,0,0,0.257259436035947,0,0.515672092277442,1.01158230429799,0,1.26766280701236,3.38844532069132,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0.841299845405528,2.85650984403804,2.65042249141936,0.61245399607477,0.575072826109418,0,7.70811166995721,8.68273898979276,15.5142598588806,0.659431438650969,0.823388792421687,0.52091337055676,10.0505879640497,5.6276261003168,6.87592114995646,0.589257170947335,1.99320353118744,0.559198337475902,2.65041676666144,3.02286240427142,0,0.860423876981386,11.5595126730318,4.31762553310254,5.84798775702902,5.82434953226536,2.52799956237153,2.21559419351475,0.779358013808606,1.06001872353102,1.40843419776681,1.28326477414318,0,0,0.649473123033642,0,0,1.25602267690966,5.43769555659061,0.890652834388949,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0,1.75933227861546,0.247194967734374,4.19338135067744,0,0.808834249737046,0.883366073841574,0,0,1.46390398505774,3.35114730901528,0.255457055208591,0,0,0,5.99162557619291,4.57500602818627,0.753926112677186,3.99795936442236,3.06858548796397,4.1557608911912,5.19172041816825,0.101839363850316,0.870848794270651,3.53811861807145,9.89076722666428,0.650602214813519,0.229902104433473,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.281105173679186,0.517406741478031,2.37124792226126,0.567318240503458,0.879755620819744,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0,3.36463917702604,0.617427674275707,0,1.85115396664481,0.853153002140936,0.232236671860439,0.128867461322093,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,4.74324203339438,1.00107063429656,1.17935397067922,0.899448449539415,0.811440485554012,0.964708639009667,1.78238096246994,3.45235364940973,0.324270453550071,0,0,0,0,0.252578877947112,3.94674309748207,1.92977408545347,5.35784251483154,0.189491411770485,0,0,0.469380496577004,0.837531287209079,5.2369600994923,3.12213836572478,1.26108115284953,1.10732344824387,2.71073106717728,2.13022309130459,3.45369963731791,2.89298117163023,0,0,34.4234991113325,17.6599517635029,7.70642831941401,8.90808818100744,2.29508923527346,0,0.315508219416257,1.17131623288992,1.07711698866399,1.19484398976276,0.668396022247182,1.41538265394416,0.809621403349789,0.876767573733936,0,4.17717711348349,0.851640511249612,0.534196811001766,0.162886959353576,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,1.36175842301515,0.36012218806262,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.938686832254841,0.42366414172764,1.32317038832977,12.5313552235525,1.13025098687134,3.37752379597673,3.34242563208782,4.59594519286172,0,12.0526446306831,0.512612642393558,0,0.370389054739423,0,0.683471138605126,0.686334519619568,0,0,0,0.954670618015114,0.474503990371703,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0.26175594198403,0,1.24267862617385,0,0,0.330916980914195,0.194451188344048,0.516639293910924,0,0,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0,0,0.129920822977795,0,0.79472541912506,0,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,0.443971906748129,0.807424709485281,1.34307693091263,0.965947970160952,0.187682475451182,0.183151624267265,0.214368379079066,0,0,1.84130094602871,1.14579102687879,1.03111909406213,0,2.2661816921691,1.35004500046361,1.35096360967266,0.906284817968409,1.55328093525546,0.93408612825759,0,0.512200817262403,0,0.419226325255965,1.47074806760011,0.666740183404846,1.03017528619447,0.320919209591815,0.758091635291392,0.50695859978048,0.943131706930381,0.842773567228942,0.768301828858431,0.918967503289812,1.42888107384922,0.695305955669133,0.578727661391115,0,0.883193520806384,0.342869252385415,0.70990322463735,1.66905332963125,1.30811774969096,1.31753132581463,0.846146078916765,0.548783918618318,0.526139422875686,0.407412341537585,0,0.355905054372522,0.689531376628944,0.409231043169689,0.77468420592983,0,0.499621155875892,0.467863216890817,0.859484216193193,0,0.220591419119515,0.927471342481686
|short_description=p7@Scd1
}}

Revision as of 04:23, 4 August 2015

Short description:p7@Scd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Scd1_5end
Coexpression cluster:MCL_coexpression_mm9:3198
Association with transcript: -100bp_to_ENSMUST00000041331, NM_009127, uc008hpr.2_5end
EntrezGene:20249
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p7@Scd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.37
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H95.44
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G49.89
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B634.42
mammary gland, adult pregnant day19.CNhs10476.588-5H217.66
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A38.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C312.53
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H33.38
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C912.05
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure9.00e-1595
ectoderm9.00e-1595
presumptive ectoderm9.00e-1595
nervous system7.72e-1275
ecto-epithelium2.46e-1173
central nervous system9.53e-1173
regional part of nervous system6.91e-1054
anatomical conduit2.99e-09122
tube3.12e-09114
neural tube1.75e-0852
neural rod1.75e-0852
future spinal cord1.75e-0852
neural keel1.75e-0852
cell layer1.51e-07176
brain1.51e-0747
future brain1.51e-0747
posterior neural tube3.30e-0712
chordal neural plate3.30e-0712
neurectoderm3.32e-0764
neural plate3.32e-0764
presumptive neural plate3.32e-0764
regional part of brain5.63e-0746
epithelium8.35e-07174
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