FFCP PHASE1:Mm9::chr7:133512043..133512060,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=4|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:133512043..133512060,-|id=chr7:133512043..133512060,-|ontology_enrichment_celltype=CL:0000791!7.02e-19!9;CL:0000789!7.02e-19!9;CL:0002420!7.02e-19!9;CL:0002419!7.02e-19!9;CL:0000790!7.02e-19!9;CL:0000624!4.84e-17!8;CL:0000084!4.13e-15!11;CL:0000827!4.13e-15!11;CL:0000838!1.07e-13!12;CL:0000893!3.10e-13!6;CL:0002489!3.10e-13!6;CL:0000898!3.10e-13!6;CL:0000809!3.10e-13!6;CL:0000810!3.10e-13!6;CL:0000895!3.10e-13!6;CL:0000808!3.10e-13!6;CL:0000894!3.10e-13!6;CL:0000806!3.10e-13!6;CL:0000807!3.10e-13!6;CL:0000805!3.10e-13!6;CL:0002425!3.10e-13!6;CL:0002436!3.10e-13!6;CL:0002427!3.10e-13!6;CL:0002428!3.10e-13!6;CL:0002429!3.10e-13!6;CL:0002433!3.10e-13!6;CL:0002431!3.10e-13!6;CL:0002432!3.10e-13!6;CL:0000542!1.68e-12!13;CL:0000051!1.68e-12!13;CL:0000738!3.91e-09!17;CL:0002087!3.91e-09!17;CL:0002031!2.04e-08!25|ontology_enrichment_celltype_v019_2=CL:0000624,1.17e-19,8;CL:0000791,1.94e-17,9;CL:0000789,1.94e-17,9;CL:0002420,1.94e-17,9;CL:0002419,1.94e-17,9;CL:0000790,1.94e-17,9;CL:0000084,3.32e-14,11;CL:0000827,3.32e-14,11;CL:0000838,5.44e-13,12;CL:0000893,2.56e-12,6;CL:0002489,2.56e-12,6;CL:0000898,2.56e-12,6;CL:0000809,2.56e-12,6;CL:0000810,2.56e-12,6;CL:0000895,2.56e-12,6;CL:0000808,2.56e-12,6;CL:0000894,2.56e-12,6;CL:0000806,2.56e-12,6;CL:0000807,2.56e-12,6;CL:0000805,2.56e-12,6;CL:0002425,2.56e-12,6;CL:0002436,2.56e-12,6;CL:0002427,2.56e-12,6;CL:0002428,2.56e-12,6;CL:0002429,2.56e-12,6;CL:0002433,2.56e-12,6;CL:0002431,2.56e-12,6;CL:0002432,2.56e-12,6;CL:0000542,5.81e-12,13;CL:0000051,5.81e-12,13;CL:0000738,4.72e-09,17;CL:0002087,4.72e-09,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!3.09e-37!23;UBERON:0000974!3.09e-37!23;UBERON:0004807!3.09e-37!23;UBERON:0005058!3.09e-37!23;UBERON:0003351!3.09e-37!23;UBERON:0009113!3.09e-37!23;UBERON:0003295!3.09e-37!23;UBERON:0009722!3.09e-37!23;UBERON:0005562!3.09e-37!23;UBERON:0007690!3.09e-37!23;UBERON:0006562!1.85e-35!24;UBERON:0003408!1.85e-35!24;UBERON:0001557!1.85e-35!24;UBERON:0001042!1.85e-35!24;UBERON:0008814!1.85e-35!24;UBERON:0009145!1.85e-35!24;UBERON:0004177!3.04e-34!29;UBERON:0000072!6.40e-31!27;UBERON:0000065!9.76e-25!41;UBERON:0002193!3.75e-24!48;UBERON:0002390!4.76e-24!45;UBERON:0003061!4.76e-24!45;UBERON:0001004!5.27e-24!42;UBERON:0000063!1.26e-22!35;UBERON:0005057!9.69e-19!51;UBERON:0002405!5.53e-16!70;UBERON:0003929!6.11e-14!55;UBERON:0002368!1.33e-13!60;UBERON:0005911!1.33e-13!69;UBERON:0003081!1.58e-13!88;UBERON:0002530!3.98e-12!65;UBERON:0000490!1.00e-10!66;UBERON:0001041!1.32e-10!92;UBERON:0000949!2.07e-10!72;UBERON:0000077!9.82e-10!97;UBERON:0000064!7.52e-07!99;UBERON:0001048!9.77e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.61e-57,23;UBERON:0000974,3.61e-57,23;UBERON:0004807,3.61e-57,23;UBERON:0005058,3.61e-57,23;UBERON:0003351,3.61e-57,23;UBERON:0009113,3.61e-57,23;UBERON:0003295,3.61e-57,23;UBERON:0009722,3.61e-57,23;UBERON:0005562,3.61e-57,23;UBERON:0007690,3.61e-57,23;UBERON:0006562,1.07e-54,24;UBERON:0003408,1.07e-54,24;UBERON:0001557,1.07e-54,24;UBERON:0001042,1.07e-54,24;UBERON:0008814,1.07e-54,24;UBERON:0009145,1.07e-54,24;UBERON:0000072,2.25e-48,27;UBERON:0004177,6.95e-45,29;UBERON:0005057,6.95e-45,29;UBERON:0000077,8.39e-37,35;UBERON:0007811,1.02e-35,36;UBERON:0000065,4.43e-31,41;UBERON:0001004,2.77e-30,42;UBERON:0000153,1.59e-29,43;UBERON:0002390,4.14e-28,45;UBERON:0003061,4.14e-28,45;UBERON:0002193,3.32e-26,48;UBERON:0002405,3.32e-26,48;UBERON:0003929,1.44e-22,55;UBERON:0002368,1.74e-20,60;UBERON:0002530,1.01e-18,65;UBERON:0000490,2.12e-18,66;UBERON:0005911,1.71e-17,69;UBERON:0000949,1.16e-16,72;UBERON:0001041,9.58e-15,80;UBERON:0003081,2.35e-13,87;UBERON:0004921,1.41e-09,114;UBERON:0001007,2.29e-09,116;UBERON:0001555,2.29e-09,116;UBERON:0007026,2.29e-09,116;UBERON:0004119,3.66e-09,118;UBERON:0000925,3.66e-09,118;UBERON:0006595,3.66e-09,118;UBERON:0000926,5.76e-09,120;UBERON:0004120,5.76e-09,120;UBERON:0006603,5.76e-09,120;UBERON:0001048,9.52e-08,134|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,5.34997144176334,4.44722600011788,2.22583358693156,1.59544317990673,0.856003649656029,0.611942816932982,0,0,0,0.315462165358238,0.274228867211478,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0.837531287209079,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0,0,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90027801570446,0.405450430580328,2.56777392912068,4.80707045017842,4.833720783022,4.37098980518783,5.88957702647847,6.64602872285597,6.46185279668145,6.55378537232999,8.06609481094724,6.23730436734416,7.98558285614734,7.48012173962041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr7:133512043..133512060,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:133512043..133512060,- | |||
|description=CAGE_peak_at_chr7:133512043..133512060,- | |||
|id=chr7:133512043..133512060,- | |||
|ontology_enrichment_celltype=CL:0000791!7.02e-19!9;CL:0000789!7.02e-19!9;CL:0002420!7.02e-19!9;CL:0002419!7.02e-19!9;CL:0000790!7.02e-19!9;CL:0000624!4.84e-17!8;CL:0000084!4.13e-15!11;CL:0000827!4.13e-15!11;CL:0000838!1.07e-13!12;CL:0000893!3.10e-13!6;CL:0002489!3.10e-13!6;CL:0000898!3.10e-13!6;CL:0000809!3.10e-13!6;CL:0000810!3.10e-13!6;CL:0000895!3.10e-13!6;CL:0000808!3.10e-13!6;CL:0000894!3.10e-13!6;CL:0000806!3.10e-13!6;CL:0000807!3.10e-13!6;CL:0000805!3.10e-13!6;CL:0002425!3.10e-13!6;CL:0002436!3.10e-13!6;CL:0002427!3.10e-13!6;CL:0002428!3.10e-13!6;CL:0002429!3.10e-13!6;CL:0002433!3.10e-13!6;CL:0002431!3.10e-13!6;CL:0002432!3.10e-13!6;CL:0000542!1.68e-12!13;CL:0000051!1.68e-12!13;CL:0000738!3.91e-09!17;CL:0002087!3.91e-09!17;CL:0002031!2.04e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.17e-19,8;CL:0000791,1.94e-17,9;CL:0000789,1.94e-17,9;CL:0002420,1.94e-17,9;CL:0002419,1.94e-17,9;CL:0000790,1.94e-17,9;CL:0000084,3.32e-14,11;CL:0000827,3.32e-14,11;CL:0000838,5.44e-13,12;CL:0000893,2.56e-12,6;CL:0002489,2.56e-12,6;CL:0000898,2.56e-12,6;CL:0000809,2.56e-12,6;CL:0000810,2.56e-12,6;CL:0000895,2.56e-12,6;CL:0000808,2.56e-12,6;CL:0000894,2.56e-12,6;CL:0000806,2.56e-12,6;CL:0000807,2.56e-12,6;CL:0000805,2.56e-12,6;CL:0002425,2.56e-12,6;CL:0002436,2.56e-12,6;CL:0002427,2.56e-12,6;CL:0002428,2.56e-12,6;CL:0002429,2.56e-12,6;CL:0002433,2.56e-12,6;CL:0002431,2.56e-12,6;CL:0002432,2.56e-12,6;CL:0000542,5.81e-12,13;CL:0000051,5.81e-12,13;CL:0000738,4.72e-09,17;CL:0002087,4.72e-09,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.09e-37!23;UBERON:0000974!3.09e-37!23;UBERON:0004807!3.09e-37!23;UBERON:0005058!3.09e-37!23;UBERON:0003351!3.09e-37!23;UBERON:0009113!3.09e-37!23;UBERON:0003295!3.09e-37!23;UBERON:0009722!3.09e-37!23;UBERON:0005562!3.09e-37!23;UBERON:0007690!3.09e-37!23;UBERON:0006562!1.85e-35!24;UBERON:0003408!1.85e-35!24;UBERON:0001557!1.85e-35!24;UBERON:0001042!1.85e-35!24;UBERON:0008814!1.85e-35!24;UBERON:0009145!1.85e-35!24;UBERON:0004177!3.04e-34!29;UBERON:0000072!6.40e-31!27;UBERON:0000065!9.76e-25!41;UBERON:0002193!3.75e-24!48;UBERON:0002390!4.76e-24!45;UBERON:0003061!4.76e-24!45;UBERON:0001004!5.27e-24!42;UBERON:0000063!1.26e-22!35;UBERON:0005057!9.69e-19!51;UBERON:0002405!5.53e-16!70;UBERON:0003929!6.11e-14!55;UBERON:0002368!1.33e-13!60;UBERON:0005911!1.33e-13!69;UBERON:0003081!1.58e-13!88;UBERON:0002530!3.98e-12!65;UBERON:0000490!1.00e-10!66;UBERON:0001041!1.32e-10!92;UBERON:0000949!2.07e-10!72;UBERON:0000077!9.82e-10!97;UBERON:0000064!7.52e-07!99;UBERON:0001048!9.77e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.61e-57,23;UBERON:0000974,3.61e-57,23;UBERON:0004807,3.61e-57,23;UBERON:0005058,3.61e-57,23;UBERON:0003351,3.61e-57,23;UBERON:0009113,3.61e-57,23;UBERON:0003295,3.61e-57,23;UBERON:0009722,3.61e-57,23;UBERON:0005562,3.61e-57,23;UBERON:0007690,3.61e-57,23;UBERON:0006562,1.07e-54,24;UBERON:0003408,1.07e-54,24;UBERON:0001557,1.07e-54,24;UBERON:0001042,1.07e-54,24;UBERON:0008814,1.07e-54,24;UBERON:0009145,1.07e-54,24;UBERON:0000072,2.25e-48,27;UBERON:0004177,6.95e-45,29;UBERON:0005057,6.95e-45,29;UBERON:0000077,8.39e-37,35;UBERON:0007811,1.02e-35,36;UBERON:0000065,4.43e-31,41;UBERON:0001004,2.77e-30,42;UBERON:0000153,1.59e-29,43;UBERON:0002390,4.14e-28,45;UBERON:0003061,4.14e-28,45;UBERON:0002193,3.32e-26,48;UBERON:0002405,3.32e-26,48;UBERON:0003929,1.44e-22,55;UBERON:0002368,1.74e-20,60;UBERON:0002530,1.01e-18,65;UBERON:0000490,2.12e-18,66;UBERON:0005911,1.71e-17,69;UBERON:0000949,1.16e-16,72;UBERON:0001041,9.58e-15,80;UBERON:0003081,2.35e-13,87;UBERON:0004921,1.41e-09,114;UBERON:0001007,2.29e-09,116;UBERON:0001555,2.29e-09,116;UBERON:0007026,2.29e-09,116;UBERON:0004119,3.66e-09,118;UBERON:0000925,3.66e-09,118;UBERON:0006595,3.66e-09,118;UBERON:0000926,5.76e-09,120;UBERON:0004120,5.76e-09,120;UBERON:0006603,5.76e-09,120;UBERON:0001048,9.52e-08,134 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,5.34997144176334,4.44722600011788,2.22583358693156,1.59544317990673,0.856003649656029,0.611942816932982,0,0,0,0.315462165358238,0.274228867211478,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0.837531287209079,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0,0,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90027801570446,0.405450430580328,2.56777392912068,4.80707045017842,4.833720783022,4.37098980518783,5.88957702647847,6.64602872285597,6.46185279668145,6.55378537232999,8.06609481094724,6.23730436734416,7.98558285614734,7.48012173962041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:133512043..133512060,- | |||
}} |
Latest revision as of 04:51, 4 August 2015
Short description: | p@chr7:133512043..133512060, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:133512043..133512060, - |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data