FFCP PHASE1:Mm9::chr2:152777263..152777276,-: Difference between revisions
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{{FFCP|EntrezGene=252864|HGNC=|MCL_coexpression_id=293|UniProt=Q8R4V2|association_with_transcript=41bp_to_NM_001159376,uc008ngu.2,uc012cgl.1,uc012cgm.1_5end|description=CAGE_peak_2_at_Dusp15_5end|id=chr2:152777263..152777276,-|ontology_enrichment_celltype=CL:0000221!2.41e-07!44;CL:0000133!2.41e-07!44;CL:0002319!9.12e-07!43|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.37e-15!75;UBERON:0001016!3.37e-15!75;UBERON:0004121!2.66e-14!102;UBERON:0000924!2.66e-14!102;UBERON:0006601!2.66e-14!102;UBERON:0001017!2.70e-14!73;UBERON:0005743!2.70e-14!73;UBERON:0001049!1.92e-12!52;UBERON:0005068!1.92e-12!52;UBERON:0006241!1.92e-12!52;UBERON:0007135!1.92e-12!52;UBERON:0000033!6.12e-12!63;UBERON:0002020!1.29e-10!34;UBERON:0002346!3.28e-10!71;UBERON:0003075!3.28e-10!71;UBERON:0007284!3.28e-10!71;UBERON:0000955!7.94e-10!50;UBERON:0006238!7.94e-10!50;UBERON:0002616!1.85e-09!49;UBERON:0003076!1.82e-08!12;UBERON:0003057!1.82e-08!12;UBERON:0000489!7.96e-08!21;UBERON:0007811!1.45e-07!86;UBERON:0003056!1.86e-07!49;UBERON:0002791!1.89e-07!29;UBERON:0003528!1.89e-07!29;UBERON:0001893!1.89e-07!29;UBERON:0000153!9.39e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0003076,6.53e-14,12;UBERON:0003057,6.53e-14,12;UBERON:0001016,6.39e-12,75;UBERON:0001017,1.82e-11,73;UBERON:0000073,3.73e-11,54;UBERON:0004121,4.14e-11,95;UBERON:0000924,4.14e-11,95;UBERON:0006601,4.14e-11,95;UBERON:0001049,1.29e-10,52;UBERON:0005068,1.29e-10,52;UBERON:0006241,1.29e-10,52;UBERON:0007135,1.29e-10,52;UBERON:0002346,2.52e-08,64;UBERON:0003075,2.52e-08,64;UBERON:0007284,2.52e-08,64;UBERON:0002240,2.91e-08,6;UBERON:0005174,2.91e-08,6;UBERON:0001137,2.91e-08,6;UBERON:0010371,3.02e-08,73;UBERON:0000489,3.29e-08,21;UBERON:0004733,3.46e-07,6;UBERON:0004732,3.46e-07,6;UBERON:0002028,3.46e-07,6;UBERON:0007277,3.46e-07,6;UBERON:0002021,3.53e-07,10;UBERON:0000411,3.53e-07,10;UBERON:0001950,3.53e-07,10|phase1_expression=0.640595388419176,1.39590163055744,1.36499771816861,0,0,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0.159992422793407,1.60586496747019,1.72269589234506,2.15380998079537,1.50829862880122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,3.12956537739216,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,1.90149421051854,0,0.889294796111139,0,0,0,2.69640099466564,4.99483796918021,0.207379224616955,0.540023753326763,0,12.5686433137674,13.9147180799517,0.122490799214954,0.0958454710182364,0,0,2.42605942361857,2.61131106535614,0.131886287730194,0.823388792421687,0,3.62937898701795,0,1.68078072554491,2.65165726926301,5.41012387036591,0.745597783301202,1.4387976733305,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,9.71819596459095,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0.647067399789637,0.220841518460394,0.484875253135222,0,2.04946557908083,1.25668024088073,0,0,0,0,1.79748767285787,0.915001205637253,0.502617408451458,0.521472960576829,1.53429274398198,2.0778804455956,2.10913641988085,0,0.248813941220186,3.53811861807145,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.408218994907967,0.2562274405697,0.374806898238915,1.03481348295606,0.215567992932842,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243206428637567,0,0,0,0.841159794256509,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,2.25415471346161,0.814605311381257,1.55161989734101,0.631222379012867,0.758838445491087,2.36176236767363,2.19798218977925,1.72756029490521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,4.17431533968259,5.39173758324135,0,0.757412781613119,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,1.15420377059036,0,0.301564624640779,0.238744688006273,0.164140899745061,0,5.93360966433631,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,2.25477175473676,0.897099276263873,1.82004339502807,1.55560950675238,1.42075805825504,1.18269287843545,1.5256441023948,1.3020438484395,1.99232754408851,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0,0.25984164595559,0,0,0,0.295379054349154,0.201932899896295,0,0,0.0974578807397524,0,0.116876902181569,1.58711268530648,0,0,0,0,0,0,0,0,2.25900737046827,3.68260189205742,1.14579102687879,2.749650917499,0.685082519770642,2.2661816921691,1.35004500046361,0,1.81256963593682,0.51776031175182,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0.476293691283074,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.543216455383447,0,0,0.197008964751127,0,0,0,0,0.233931608445408,0.214871054048298,0.57386499620653,1.98532277207564,1.85494268496337|short_description=p2@Dusp15}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:252864 | |||
|HGNC= | |||
|MCL_coexpression_id=293 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R4V2 | |||
|association_with_transcript=41bp_to_NM_001159376,uc008ngu.2,uc012cgl.1,uc012cgm.1_5end | |||
|cluster_id=chr2:152777263..152777276,- | |||
|description=CAGE_peak_2_at_Dusp15_5end | |||
|id=chr2:152777263..152777276,- | |||
|ontology_enrichment_celltype=CL:0000221!2.41e-07!44;CL:0000133!2.41e-07!44;CL:0002319!9.12e-07!43 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.37e-15!75;UBERON:0001016!3.37e-15!75;UBERON:0004121!2.66e-14!102;UBERON:0000924!2.66e-14!102;UBERON:0006601!2.66e-14!102;UBERON:0001017!2.70e-14!73;UBERON:0005743!2.70e-14!73;UBERON:0001049!1.92e-12!52;UBERON:0005068!1.92e-12!52;UBERON:0006241!1.92e-12!52;UBERON:0007135!1.92e-12!52;UBERON:0000033!6.12e-12!63;UBERON:0002020!1.29e-10!34;UBERON:0002346!3.28e-10!71;UBERON:0003075!3.28e-10!71;UBERON:0007284!3.28e-10!71;UBERON:0000955!7.94e-10!50;UBERON:0006238!7.94e-10!50;UBERON:0002616!1.85e-09!49;UBERON:0003076!1.82e-08!12;UBERON:0003057!1.82e-08!12;UBERON:0000489!7.96e-08!21;UBERON:0007811!1.45e-07!86;UBERON:0003056!1.86e-07!49;UBERON:0002791!1.89e-07!29;UBERON:0003528!1.89e-07!29;UBERON:0001893!1.89e-07!29;UBERON:0000153!9.39e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,6.53e-14,12;UBERON:0003057,6.53e-14,12;UBERON:0001016,6.39e-12,75;UBERON:0001017,1.82e-11,73;UBERON:0000073,3.73e-11,54;UBERON:0004121,4.14e-11,95;UBERON:0000924,4.14e-11,95;UBERON:0006601,4.14e-11,95;UBERON:0001049,1.29e-10,52;UBERON:0005068,1.29e-10,52;UBERON:0006241,1.29e-10,52;UBERON:0007135,1.29e-10,52;UBERON:0002346,2.52e-08,64;UBERON:0003075,2.52e-08,64;UBERON:0007284,2.52e-08,64;UBERON:0002240,2.91e-08,6;UBERON:0005174,2.91e-08,6;UBERON:0001137,2.91e-08,6;UBERON:0010371,3.02e-08,73;UBERON:0000489,3.29e-08,21;UBERON:0004733,3.46e-07,6;UBERON:0004732,3.46e-07,6;UBERON:0002028,3.46e-07,6;UBERON:0007277,3.46e-07,6;UBERON:0002021,3.53e-07,10;UBERON:0000411,3.53e-07,10;UBERON:0001950,3.53e-07,10 | |||
|phase1_expression=0.640595388419176,1.39590163055744,1.36499771816861,0,0,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0.159992422793407,1.60586496747019,1.72269589234506,2.15380998079537,1.50829862880122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,3.12956537739216,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,1.90149421051854,0,0.889294796111139,0,0,0,2.69640099466564,4.99483796918021,0.207379224616955,0.540023753326763,0,12.5686433137674,13.9147180799517,0.122490799214954,0.0958454710182364,0,0,2.42605942361857,2.61131106535614,0.131886287730194,0.823388792421687,0,3.62937898701795,0,1.68078072554491,2.65165726926301,5.41012387036591,0.745597783301202,1.4387976733305,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,9.71819596459095,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0.647067399789637,0.220841518460394,0.484875253135222,0,2.04946557908083,1.25668024088073,0,0,0,0,1.79748767285787,0.915001205637253,0.502617408451458,0.521472960576829,1.53429274398198,2.0778804455956,2.10913641988085,0,0.248813941220186,3.53811861807145,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.408218994907967,0.2562274405697,0.374806898238915,1.03481348295606,0.215567992932842,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243206428637567,0,0,0,0.841159794256509,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,2.25415471346161,0.814605311381257,1.55161989734101,0.631222379012867,0.758838445491087,2.36176236767363,2.19798218977925,1.72756029490521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,4.17431533968259,5.39173758324135,0,0.757412781613119,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,1.15420377059036,0,0.301564624640779,0.238744688006273,0.164140899745061,0,5.93360966433631,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,2.25477175473676,0.897099276263873,1.82004339502807,1.55560950675238,1.42075805825504,1.18269287843545,1.5256441023948,1.3020438484395,1.99232754408851,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0,0.25984164595559,0,0,0,0.295379054349154,0.201932899896295,0,0,0.0974578807397524,0,0.116876902181569,1.58711268530648,0,0,0,0,0,0,0,0,2.25900737046827,3.68260189205742,1.14579102687879,2.749650917499,0.685082519770642,2.2661816921691,1.35004500046361,0,1.81256963593682,0.51776031175182,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0.476293691283074,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.543216455383447,0,0,0.197008964751127,0,0,0,0,0.233931608445408,0.214871054048298,0.57386499620653,1.98532277207564,1.85494268496337 | |||
|short_description=p2@Dusp15 | |||
}} |
Revision as of 07:08, 4 August 2015
Short description: | p2@Dusp15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dusp15_5end |
Coexpression cluster: | MCL_coexpression_mm9:293 |
Association with transcript: | 41bp_to_NM_001159376, uc008ngu.2, uc012cgl.1, uc012cgm.1_5end |
EntrezGene: | 252864 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 6.53e-14 | 12 |
chordal neural plate | 6.53e-14 | 12 |
nervous system | 6.39e-12 | 75 |
central nervous system | 1.82e-11 | 73 |
regional part of nervous system | 3.73e-11 | 54 |
ectoderm-derived structure | 4.14e-11 | 95 |
ectoderm | 4.14e-11 | 95 |
presumptive ectoderm | 4.14e-11 | 95 |
neural tube | 1.29e-10 | 52 |
neural rod | 1.29e-10 | 52 |
future spinal cord | 1.29e-10 | 52 |
neural keel | 1.29e-10 | 52 |
neurectoderm | 2.52e-08 | 64 |
neural plate | 2.52e-08 | 64 |
presumptive neural plate | 2.52e-08 | 64 |
spinal cord | 2.91e-08 | 6 |
dorsal region element | 2.91e-08 | 6 |
dorsum | 2.91e-08 | 6 |
ecto-epithelium | 3.02e-08 | 73 |
cavitated compound organ | 3.29e-08 | 21 |
segmental subdivision of hindbrain | 3.46e-07 | 6 |
segmental subdivision of nervous system | 3.46e-07 | 6 |
hindbrain | 3.46e-07 | 6 |
presumptive hindbrain | 3.46e-07 | 6 |
occipital lobe | 3.53e-07 | 10 |
visual cortex | 3.53e-07 | 10 |
neocortex | 3.53e-07 | 10 |