FFCP PHASE1:Mm9::chr10:42722497..42722521,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:42722497..42722521,-|id=chr10:42722497..42722521,-|ontology_enrichment_celltype=CL:0000117!6.95e-14!23;CL:0000337!6.95e-14!23;CL:0000540!2.58e-09!33;CL:0000047!2.58e-09!33;CL:0000031!2.58e-09!33;CL:0000404!2.58e-09!33;CL:0000393!8.29e-08!39;CL:0000211!8.29e-08!39;CL:0002319!1.95e-07!43;CL:0000221!3.12e-07!44;CL:0000133!3.12e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,8.13e-17,23;CL:0000337,8.13e-17,23;CL:0000540,1.80e-09,33;CL:0000047,1.80e-09,33;CL:0000031,1.80e-09,33;CL:0000404,1.80e-09,33;CL:0002319,2.77e-07,43;CL:0000393,4.63e-07,39;CL:0000211,4.63e-07,39;CL:0000221,6.68e-07,44;CL:0000133,6.68e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.63e-24!52;UBERON:0005068!5.63e-24!52;UBERON:0006241!5.63e-24!52;UBERON:0007135!5.63e-24!52;UBERON:0000033!7.71e-24!63;UBERON:0001017!8.30e-24!73;UBERON:0005743!8.30e-24!73;UBERON:0000955!2.20e-23!50;UBERON:0006238!2.20e-23!50;UBERON:0000073!8.53e-23!75;UBERON:0001016!8.53e-23!75;UBERON:0002616!1.12e-22!49;UBERON:0002346!5.67e-22!71;UBERON:0003075!5.67e-22!71;UBERON:0007284!5.67e-22!71;UBERON:0003056!2.53e-21!49;UBERON:0004121!3.80e-20!102;UBERON:0000924!3.80e-20!102;UBERON:0006601!3.80e-20!102;UBERON:0003080!2.17e-19!40;UBERON:0002780!7.95e-19!39;UBERON:0001890!7.95e-19!39;UBERON:0006240!7.95e-19!39;UBERON:0002020!2.53e-18!34;UBERON:0002791!5.88e-16!29;UBERON:0003528!5.88e-16!29;UBERON:0001893!5.88e-16!29;UBERON:0000153!9.59e-12!94;UBERON:0000956!1.29e-11!21;UBERON:0001869!1.29e-11!21;UBERON:0000203!1.29e-11!21;UBERON:0007811!1.11e-10!86;UBERON:0002619!3.61e-09!17;UBERON:0002021!3.31e-08!10;UBERON:0000411!3.31e-08!10;UBERON:0001950!3.31e-08!10;UBERON:0000025!1.80e-07!114;UBERON:0004111!9.02e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.41e-29,54;UBERON:0001049,5.60e-28,52;UBERON:0005068,5.60e-28,52;UBERON:0006241,5.60e-28,52;UBERON:0007135,5.60e-28,52;UBERON:0002346,1.26e-27,64;UBERON:0003075,1.26e-27,64;UBERON:0007284,1.26e-27,64;UBERON:0001017,3.24e-26,73;UBERON:0000955,5.07e-25,47;UBERON:0006238,5.07e-25,47;UBERON:0003056,6.84e-25,49;UBERON:0001016,7.88e-25,75;UBERON:0002616,3.58e-24,46;UBERON:0003080,5.82e-23,40;UBERON:0002020,1.97e-22,34;UBERON:0002780,2.88e-22,39;UBERON:0001890,2.88e-22,39;UBERON:0006240,2.88e-22,39;UBERON:0004121,3.69e-22,95;UBERON:0000924,3.69e-22,95;UBERON:0006601,3.69e-22,95;UBERON:0010314,2.50e-21,92;UBERON:0010371,3.04e-21,73;UBERON:0003528,1.69e-19,29;UBERON:0002791,1.69e-19,29;UBERON:0001893,1.69e-19,29;UBERON:0000956,4.05e-14,21;UBERON:0001869,4.05e-14,21;UBERON:0000203,4.05e-14,21;UBERON:0002619,4.36e-11,17;UBERON:0002021,8.66e-10,10;UBERON:0000411,8.66e-10,10;UBERON:0001950,8.66e-10,10;UBERON:0000025,9.98e-08,114;UBERON:0004111,3.80e-07,122|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,1.56478268869608,0.65407546914134,0,0.194429899074283,1.1198913730029,0,0,0,0,1.02903774414379,0.85960031981627,0.515672092277442,9.3065571995415,15.869729378161,12.6766280701236,0.338844532069132,0.889294796111139,0,0,0,1.19840044207362,2.30530983192933,12.6501327016343,10.3954572515402,8.2026734927039,2.85650984403804,1.98781686856452,5.63457676388789,9.10531974673246,14.7075005857603,6.60695285996332,7.53355294702608,7.21950706304344,9.62769900430415,18.5719916512892,7.8137005583514,3.07101298901519,3.93933827022176,6.87592114995646,8.2496003932627,8.82704420954438,7.26957838718672,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.983110940922263,1.36344258062446,0.259786004602869,0.70667914902068,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.691846491768175,1.05505848386836,0.940709657085638,0.502666365318702,0.494389935468748,0.578397427679647,0,5.3383060482645,4.41683036920787,1.93950101254089,0,6.44117753425404,5.44561437714983,0.255457055208591,0,0,0,6.5907881338122,5.94750783664214,7.66491547888473,9.90798625095976,9.97290283588289,6.02585329222724,3.89379031362618,0.81471491080253,0.248813941220186,0,2.73574412652416,1.17108398666433,0.459804208866946,1.44049703844279,2.86339153887859,2.58538696775046,2.562274405697,2.90475346135159,2.84573707812917,1.29340795759705,1.89106080167819,2.11141348996739,2.19195732427575,1.11218899690239,3.1342694986995,1.4404749548556,0.995171334092466,0,0,0,0.828503090142008,0.234526059981096,0.540186184383045,2.3674473558521,1.37734962223183,0.925602677324269,4.88321283975857,2.68273401399619,0.934122738937356,1.15191894939436,5.91002870684743,1.78351381000883,2.04679982395465,0.439100230582101,1.61047702512446,10.0939175310781,13.6863134464448,0,0,0.426576501070468,0.928946687441754,0.38660238396628,0.605050573870028,0.667134131534611,0.380451252225118,0,0,1.00534083520108,0.397912944082302,0.38992817423824,0,1.29682829924817,0.199141273254367,0.948339504765408,0.913988100877831,0,1.62921062276251,0.969762435838129,0.631222379012867,0.379419222745544,0.147610147979602,0.627994911365499,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0,0.157635144106191,1.10732344824387,0.159454768657487,0,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0,2.72936002979246,1.75817529888305,0,0.252470927204373,0,0.780877488593277,0.646270193198397,0.477937595905104,0.668396022247182,0,0.809621403349789,1.75353514746787,0,10.6036034419196,1.27746076687442,0.712262414669021,0.488660878060728,1.81467135269789,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,4.42571487479924,1.26042765821917,2.19909762430683,1.92903331528433,2.48276327099183,4.45922044005176,3.29098041204242,0.913394847343798,0.704015124191131,0,0,0,0.645857706783622,0.422190474497091,0.358117032009409,0.164140899745061,0.582961673259701,5.19190845629427,0,0,0.185194527369712,0,0,0,0,0,0,3.81868247206045,0.158167996790568,0.203319467126849,0.432021363287205,1.25452977608681,1.09181281873089,1.48350781023303,1.48776220305605,0.26175594198403,0.648074866458964,0,0.56369293868419,0.897099276263873,0.992750942742586,1.55560950675238,0.645799117388655,2.19642963138012,2.11243029562357,5.33837977860195,1.46803082195995,4.1069300540421,3.16833006883652,0,0.202725215290164,0.616265742988964,0.25984164595559,0,0,0,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,2.49403421976732,0,0,0,1.35232715822533,0.375364950902364,1.28206136987086,1.07184189539533,0,37.8383734553435,21.1749608793301,37.2382083735608,44.3381210446714,8.90607275701835,12.8416962556249,10.1253375034771,14.4102785031751,12.6879874515577,11.9084871702919,1.764384908931,3.59122386060928,1.70733605754134,2.91728060481953,1.67690530102386,0.183843508450014,1.33348036680969,2.06035057238894,1.60459604795908,1.51618327058278,0.760437899670719,1.32038438970253,1.77918864192777,1.60062881012173,1.37845125493472,0.952587382566147,1.97003354106254,1.35036454324594,2.06042950401653,2.35518272215036,3.42869252385415,2.12970967391205,1.66905332963125,1.30811774969096,1.31753132581463,1.69229215783353,1.09756783723664,2.89376682581627,1.35804113845862,1.68342681497322,1.18635018124174,1.47756723563345,4.91077251803627,2.16911577660352,1.15743966588685,4.99621155875892,2.8071793013449,1.71896843238639,2.67803664896381,1.76473135295612,1.85494268496337|short_description=p@chr10:42722497..42722521,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:42722497..42722521,- | |||
|description=CAGE_peak_at_chr10:42722497..42722521,- | |||
|id=chr10:42722497..42722521,- | |||
|ontology_enrichment_celltype=CL:0000117!6.95e-14!23;CL:0000337!6.95e-14!23;CL:0000540!2.58e-09!33;CL:0000047!2.58e-09!33;CL:0000031!2.58e-09!33;CL:0000404!2.58e-09!33;CL:0000393!8.29e-08!39;CL:0000211!8.29e-08!39;CL:0002319!1.95e-07!43;CL:0000221!3.12e-07!44;CL:0000133!3.12e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.13e-17,23;CL:0000337,8.13e-17,23;CL:0000540,1.80e-09,33;CL:0000047,1.80e-09,33;CL:0000031,1.80e-09,33;CL:0000404,1.80e-09,33;CL:0002319,2.77e-07,43;CL:0000393,4.63e-07,39;CL:0000211,4.63e-07,39;CL:0000221,6.68e-07,44;CL:0000133,6.68e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.63e-24!52;UBERON:0005068!5.63e-24!52;UBERON:0006241!5.63e-24!52;UBERON:0007135!5.63e-24!52;UBERON:0000033!7.71e-24!63;UBERON:0001017!8.30e-24!73;UBERON:0005743!8.30e-24!73;UBERON:0000955!2.20e-23!50;UBERON:0006238!2.20e-23!50;UBERON:0000073!8.53e-23!75;UBERON:0001016!8.53e-23!75;UBERON:0002616!1.12e-22!49;UBERON:0002346!5.67e-22!71;UBERON:0003075!5.67e-22!71;UBERON:0007284!5.67e-22!71;UBERON:0003056!2.53e-21!49;UBERON:0004121!3.80e-20!102;UBERON:0000924!3.80e-20!102;UBERON:0006601!3.80e-20!102;UBERON:0003080!2.17e-19!40;UBERON:0002780!7.95e-19!39;UBERON:0001890!7.95e-19!39;UBERON:0006240!7.95e-19!39;UBERON:0002020!2.53e-18!34;UBERON:0002791!5.88e-16!29;UBERON:0003528!5.88e-16!29;UBERON:0001893!5.88e-16!29;UBERON:0000153!9.59e-12!94;UBERON:0000956!1.29e-11!21;UBERON:0001869!1.29e-11!21;UBERON:0000203!1.29e-11!21;UBERON:0007811!1.11e-10!86;UBERON:0002619!3.61e-09!17;UBERON:0002021!3.31e-08!10;UBERON:0000411!3.31e-08!10;UBERON:0001950!3.31e-08!10;UBERON:0000025!1.80e-07!114;UBERON:0004111!9.02e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.41e-29,54;UBERON:0001049,5.60e-28,52;UBERON:0005068,5.60e-28,52;UBERON:0006241,5.60e-28,52;UBERON:0007135,5.60e-28,52;UBERON:0002346,1.26e-27,64;UBERON:0003075,1.26e-27,64;UBERON:0007284,1.26e-27,64;UBERON:0001017,3.24e-26,73;UBERON:0000955,5.07e-25,47;UBERON:0006238,5.07e-25,47;UBERON:0003056,6.84e-25,49;UBERON:0001016,7.88e-25,75;UBERON:0002616,3.58e-24,46;UBERON:0003080,5.82e-23,40;UBERON:0002020,1.97e-22,34;UBERON:0002780,2.88e-22,39;UBERON:0001890,2.88e-22,39;UBERON:0006240,2.88e-22,39;UBERON:0004121,3.69e-22,95;UBERON:0000924,3.69e-22,95;UBERON:0006601,3.69e-22,95;UBERON:0010314,2.50e-21,92;UBERON:0010371,3.04e-21,73;UBERON:0003528,1.69e-19,29;UBERON:0002791,1.69e-19,29;UBERON:0001893,1.69e-19,29;UBERON:0000956,4.05e-14,21;UBERON:0001869,4.05e-14,21;UBERON:0000203,4.05e-14,21;UBERON:0002619,4.36e-11,17;UBERON:0002021,8.66e-10,10;UBERON:0000411,8.66e-10,10;UBERON:0001950,8.66e-10,10;UBERON:0000025,9.98e-08,114;UBERON:0004111,3.80e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,1.56478268869608,0.65407546914134,0,0.194429899074283,1.1198913730029,0,0,0,0,1.02903774414379,0.85960031981627,0.515672092277442,9.3065571995415,15.869729378161,12.6766280701236,0.338844532069132,0.889294796111139,0,0,0,1.19840044207362,2.30530983192933,12.6501327016343,10.3954572515402,8.2026734927039,2.85650984403804,1.98781686856452,5.63457676388789,9.10531974673246,14.7075005857603,6.60695285996332,7.53355294702608,7.21950706304344,9.62769900430415,18.5719916512892,7.8137005583514,3.07101298901519,3.93933827022176,6.87592114995646,8.2496003932627,8.82704420954438,7.26957838718672,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.983110940922263,1.36344258062446,0.259786004602869,0.70667914902068,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.691846491768175,1.05505848386836,0.940709657085638,0.502666365318702,0.494389935468748,0.578397427679647,0,5.3383060482645,4.41683036920787,1.93950101254089,0,6.44117753425404,5.44561437714983,0.255457055208591,0,0,0,6.5907881338122,5.94750783664214,7.66491547888473,9.90798625095976,9.97290283588289,6.02585329222724,3.89379031362618,0.81471491080253,0.248813941220186,0,2.73574412652416,1.17108398666433,0.459804208866946,1.44049703844279,2.86339153887859,2.58538696775046,2.562274405697,2.90475346135159,2.84573707812917,1.29340795759705,1.89106080167819,2.11141348996739,2.19195732427575,1.11218899690239,3.1342694986995,1.4404749548556,0.995171334092466,0,0,0,0.828503090142008,0.234526059981096,0.540186184383045,2.3674473558521,1.37734962223183,0.925602677324269,4.88321283975857,2.68273401399619,0.934122738937356,1.15191894939436,5.91002870684743,1.78351381000883,2.04679982395465,0.439100230582101,1.61047702512446,10.0939175310781,13.6863134464448,0,0,0.426576501070468,0.928946687441754,0.38660238396628,0.605050573870028,0.667134131534611,0.380451252225118,0,0,1.00534083520108,0.397912944082302,0.38992817423824,0,1.29682829924817,0.199141273254367,0.948339504765408,0.913988100877831,0,1.62921062276251,0.969762435838129,0.631222379012867,0.379419222745544,0.147610147979602,0.627994911365499,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0,0.157635144106191,1.10732344824387,0.159454768657487,0,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0,2.72936002979246,1.75817529888305,0,0.252470927204373,0,0.780877488593277,0.646270193198397,0.477937595905104,0.668396022247182,0,0.809621403349789,1.75353514746787,0,10.6036034419196,1.27746076687442,0.712262414669021,0.488660878060728,1.81467135269789,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,4.42571487479924,1.26042765821917,2.19909762430683,1.92903331528433,2.48276327099183,4.45922044005176,3.29098041204242,0.913394847343798,0.704015124191131,0,0,0,0.645857706783622,0.422190474497091,0.358117032009409,0.164140899745061,0.582961673259701,5.19190845629427,0,0,0.185194527369712,0,0,0,0,0,0,3.81868247206045,0.158167996790568,0.203319467126849,0.432021363287205,1.25452977608681,1.09181281873089,1.48350781023303,1.48776220305605,0.26175594198403,0.648074866458964,0,0.56369293868419,0.897099276263873,0.992750942742586,1.55560950675238,0.645799117388655,2.19642963138012,2.11243029562357,5.33837977860195,1.46803082195995,4.1069300540421,3.16833006883652,0,0.202725215290164,0.616265742988964,0.25984164595559,0,0,0,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,2.49403421976732,0,0,0,1.35232715822533,0.375364950902364,1.28206136987086,1.07184189539533,0,37.8383734553435,21.1749608793301,37.2382083735608,44.3381210446714,8.90607275701835,12.8416962556249,10.1253375034771,14.4102785031751,12.6879874515577,11.9084871702919,1.764384908931,3.59122386060928,1.70733605754134,2.91728060481953,1.67690530102386,0.183843508450014,1.33348036680969,2.06035057238894,1.60459604795908,1.51618327058278,0.760437899670719,1.32038438970253,1.77918864192777,1.60062881012173,1.37845125493472,0.952587382566147,1.97003354106254,1.35036454324594,2.06042950401653,2.35518272215036,3.42869252385415,2.12970967391205,1.66905332963125,1.30811774969096,1.31753132581463,1.69229215783353,1.09756783723664,2.89376682581627,1.35804113845862,1.68342681497322,1.18635018124174,1.47756723563345,4.91077251803627,2.16911577660352,1.15743966588685,4.99621155875892,2.8071793013449,1.71896843238639,2.67803664896381,1.76473135295612,1.85494268496337 | |||
|short_description=p@chr10:42722497..42722521,- | |||
}} |
Latest revision as of 09:41, 4 August 2015
Short description: | p@chr10:42722497..42722521, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:42722497..42722521, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.13e-17 | 23 |
neuroblast (sensu Vertebrata) | 8.13e-17 | 23 |
neuron | 1.80e-09 | 33 |
neuronal stem cell | 1.80e-09 | 33 |
neuroblast | 1.80e-09 | 33 |
electrically signaling cell | 1.80e-09 | 33 |
neural cell | 2.77e-07 | 43 |
electrically responsive cell | 4.63e-07 | 39 |
electrically active cell | 4.63e-07 | 39 |
ectodermal cell | 6.68e-07 | 44 |
neurectodermal cell | 6.68e-07 | 44 |