FFCP PHASE1:Mm9::chr10:59504833..59504865,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=152|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:59504833..59504865,+|id=chr10:59504833..59504865,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,4.84e-08,3;CL:0000878,9.82e-07,2;CL:0000129,9.82e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!5.58e-11!14;UBERON:0000117!5.58e-11!14;UBERON:0000171!5.58e-11!14;UBERON:0000170!5.58e-11!14;UBERON:0005597!5.58e-11!14;UBERON:0000118!5.58e-11!14;UBERON:0005153!2.57e-08!17;UBERON:0005178!2.57e-08!17;UBERON:0005181!2.57e-08!17;UBERON:0002224!2.57e-08!17;UBERON:0000915!2.57e-08!17;UBERON:0008947!2.57e-08!17;UBERON:0003258!2.57e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.42e-22,14;UBERON:0000117,1.42e-22,14;UBERON:0000171,1.42e-22,14;UBERON:0000170,1.42e-22,14;UBERON:0005597,1.42e-22,14;UBERON:0000118,1.42e-22,14;UBERON:0005153,3.65e-18,17;UBERON:0005178,3.65e-18,17;UBERON:0005181,3.65e-18,17;UBERON:0002224,3.65e-18,17;UBERON:0000915,3.65e-18,17;UBERON:0008947,3.65e-18,17;UBERON:0003258,3.65e-18,17;UBERON:0005157,4.44e-15,20;UBERON:0000025,2.44e-12,114;UBERON:0003076,4.64e-12,12;UBERON:0003057,4.64e-12,12;UBERON:0004111,3.92e-11,122;UBERON:0000073,1.51e-08,54;UBERON:0001017,1.58e-08,73;UBERON:0001016,3.44e-08,75;UBERON:0004684,4.84e-08,3;UBERON:0002275,4.84e-08,3;UBERON:0011216,5.49e-07,194;UBERON:0004733,5.81e-07,6;UBERON:0004732,5.81e-07,6;UBERON:0002028,5.81e-07,6;UBERON:0007277,5.81e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69640099466564,15.7529505181837,0,0,0,1.14260393761521,1.32521124570968,0,0,0,2.20231761998777,1.40456071893706,1.53606533256243,0,0,0,0.279182999001381,0.56276261003168,1.22238598221448,0.294628585473668,1.56608848879013,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,2.92780797011547,2.30391377494801,0,0,0,0,2.54644086988199,3.66000482254901,0.251308704225729,0.347648640384553,0.511430914660661,1.66230435647648,2.43361894601636,0,1.11966273549084,1.0108910337347,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.804820204198858,0,0,0,0,0,0,0,3.57492912559016,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43848068725405,0,0,0,0,0,0,0,0,10.7156850296631,0,0,0.169745085775188,1.40814148973101,5.19269398069629,11.9021820443007,5.65887578787617,5.2019597555043,3.32197034473162,1.75400245523236,5.07976275618788,4.31712454664739,4.19482269886384,0,0,0,0,1.60550589987792,1.17211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.329940245945071,0,1.21390318077491,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.749132059759059,0.512201219238954,0.229741875822453,0,0.231768651889711,0.578727661391115,0.824171801606613,0.294397840268795,0.685738504770831,0.177475806159338,0.476872379894642,0.436039249896986,0.564656282491984,0.507687647350059,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0.578719832943424,0.249810577937946,0.701794825336225,0.429742108096597,0,0.220591419119515,0|short_description=p@chr10:59504833..59504865,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=152 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:59504833..59504865,+ | |||
|description=CAGE_peak_at_chr10:59504833..59504865,+ | |||
|id=chr10:59504833..59504865,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.84e-08,3;CL:0000878,9.82e-07,2;CL:0000129,9.82e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!5.58e-11!14;UBERON:0000117!5.58e-11!14;UBERON:0000171!5.58e-11!14;UBERON:0000170!5.58e-11!14;UBERON:0005597!5.58e-11!14;UBERON:0000118!5.58e-11!14;UBERON:0005153!2.57e-08!17;UBERON:0005178!2.57e-08!17;UBERON:0005181!2.57e-08!17;UBERON:0002224!2.57e-08!17;UBERON:0000915!2.57e-08!17;UBERON:0008947!2.57e-08!17;UBERON:0003258!2.57e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.42e-22,14;UBERON:0000117,1.42e-22,14;UBERON:0000171,1.42e-22,14;UBERON:0000170,1.42e-22,14;UBERON:0005597,1.42e-22,14;UBERON:0000118,1.42e-22,14;UBERON:0005153,3.65e-18,17;UBERON:0005178,3.65e-18,17;UBERON:0005181,3.65e-18,17;UBERON:0002224,3.65e-18,17;UBERON:0000915,3.65e-18,17;UBERON:0008947,3.65e-18,17;UBERON:0003258,3.65e-18,17;UBERON:0005157,4.44e-15,20;UBERON:0000025,2.44e-12,114;UBERON:0003076,4.64e-12,12;UBERON:0003057,4.64e-12,12;UBERON:0004111,3.92e-11,122;UBERON:0000073,1.51e-08,54;UBERON:0001017,1.58e-08,73;UBERON:0001016,3.44e-08,75;UBERON:0004684,4.84e-08,3;UBERON:0002275,4.84e-08,3;UBERON:0011216,5.49e-07,194;UBERON:0004733,5.81e-07,6;UBERON:0004732,5.81e-07,6;UBERON:0002028,5.81e-07,6;UBERON:0007277,5.81e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69640099466564,15.7529505181837,0,0,0,1.14260393761521,1.32521124570968,0,0,0,2.20231761998777,1.40456071893706,1.53606533256243,0,0,0,0.279182999001381,0.56276261003168,1.22238598221448,0.294628585473668,1.56608848879013,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,2.92780797011547,2.30391377494801,0,0,0,0,2.54644086988199,3.66000482254901,0.251308704225729,0.347648640384553,0.511430914660661,1.66230435647648,2.43361894601636,0,1.11966273549084,1.0108910337347,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.804820204198858,0,0,0,0,0,0,0,3.57492912559016,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43848068725405,0,0,0,0,0,0,0,0,10.7156850296631,0,0,0.169745085775188,1.40814148973101,5.19269398069629,11.9021820443007,5.65887578787617,5.2019597555043,3.32197034473162,1.75400245523236,5.07976275618788,4.31712454664739,4.19482269886384,0,0,0,0,1.60550589987792,1.17211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.329940245945071,0,1.21390318077491,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.749132059759059,0.512201219238954,0.229741875822453,0,0.231768651889711,0.578727661391115,0.824171801606613,0.294397840268795,0.685738504770831,0.177475806159338,0.476872379894642,0.436039249896986,0.564656282491984,0.507687647350059,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0.578719832943424,0.249810577937946,0.701794825336225,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p@chr10:59504833..59504865,+ | |||
}} |
Latest revision as of 12:26, 4 August 2015
Short description: | p@chr10:59504833..59504865, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:59504833..59504865, + |
Coexpression cluster: | MCL_coexpression_mm9:152 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.84e-08 | 3 |
central nervous system macrophage | 9.82e-07 | 2 |
microglial cell | 9.82e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lung | 1.42e-22 | 14 |
respiratory tube | 1.42e-22 | 14 |
respiration organ | 1.42e-22 | 14 |
pair of lungs | 1.42e-22 | 14 |
lung primordium | 1.42e-22 | 14 |
lung bud | 1.42e-22 | 14 |
epithelial bud | 3.65e-18 | 17 |
thoracic cavity element | 3.65e-18 | 17 |
thoracic segment organ | 3.65e-18 | 17 |
thoracic cavity | 3.65e-18 | 17 |
thoracic segment of trunk | 3.65e-18 | 17 |
respiratory primordium | 3.65e-18 | 17 |
endoderm of foregut | 3.65e-18 | 17 |
epithelial fold | 4.44e-15 | 20 |
tube | 2.44e-12 | 114 |
posterior neural tube | 4.64e-12 | 12 |
chordal neural plate | 4.64e-12 | 12 |
anatomical conduit | 3.92e-11 | 122 |
regional part of nervous system | 1.51e-08 | 54 |
central nervous system | 1.58e-08 | 73 |
nervous system | 3.44e-08 | 75 |
raphe nuclei | 4.84e-08 | 3 |
reticular formation | 4.84e-08 | 3 |
organ system subdivision | 5.49e-07 | 194 |
segmental subdivision of hindbrain | 5.81e-07 | 6 |
segmental subdivision of nervous system | 5.81e-07 | 6 |
hindbrain | 5.81e-07 | 6 |
presumptive hindbrain | 5.81e-07 | 6 |