FFCP PHASE1:Mm9::chr5:67652164..67652209,+: Difference between revisions
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{{FFCP|EntrezGene=67878|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=28bp_to_ENSMUST00000163028_5end|description=CAGE_peak_6_at_Tmem33_5end|id=chr5:67652164..67652209,+|ontology_enrichment_celltype=CL:0002319!6.61e-11!43;CL:0000221!7.83e-11!44;CL:0000133!7.83e-11!44;CL:0000055!1.72e-10!50;CL:0000393!2.94e-08!39;CL:0000211!2.94e-08!39;CL:0000540!6.93e-08!33;CL:0000047!6.93e-08!33;CL:0000031!6.93e-08!33;CL:0000404!6.93e-08!33|ontology_enrichment_celltype_v019_2=CL:0002319,6.47e-11,43;CL:0000221,7.66e-11,44;CL:0000133,7.66e-11,44;CL:0000393,2.90e-08,39;CL:0000211,2.90e-08,39;CL:0000540,6.84e-08,33;CL:0000047,6.84e-08,33;CL:0000031,6.84e-08,33;CL:0000404,6.84e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.07e-25!75;UBERON:0001016!3.07e-25!75;UBERON:0001017!1.39e-24!73;UBERON:0005743!1.39e-24!73;UBERON:0004121!4.39e-18!102;UBERON:0000924!4.39e-18!102;UBERON:0006601!4.39e-18!102;UBERON:0001049!3.90e-17!52;UBERON:0005068!3.90e-17!52;UBERON:0006241!3.90e-17!52;UBERON:0007135!3.90e-17!52;UBERON:0000955!1.75e-16!50;UBERON:0006238!1.75e-16!50;UBERON:0002616!6.88e-16!49;UBERON:0000033!7.33e-16!63;UBERON:0002346!6.64e-15!71;UBERON:0003075!6.64e-15!71;UBERON:0007284!6.64e-15!71;UBERON:0002020!1.45e-12!34;UBERON:0007811!6.92e-12!86;UBERON:0003056!7.42e-12!49;UBERON:0003080!1.40e-11!40;UBERON:0002780!5.35e-11!39;UBERON:0001890!5.35e-11!39;UBERON:0006240!5.35e-11!39;UBERON:0000153!1.09e-10!94;UBERON:0002791!4.36e-10!29;UBERON:0003528!4.36e-10!29;UBERON:0001893!4.36e-10!29;UBERON:0000025!8.55e-08!114;UBERON:0002021!1.15e-07!10;UBERON:0000411!1.15e-07!10;UBERON:0001950!1.15e-07!10;UBERON:0002619!3.57e-07!17;UBERON:0004111!3.87e-07!122;UBERON:0000956!4.08e-07!21;UBERON:0001869!4.08e-07!21;UBERON:0000203!4.08e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.91e-25,75;UBERON:0001017,1.32e-24,73;UBERON:0004121,5.46e-21,95;UBERON:0000924,5.46e-21,95;UBERON:0006601,5.46e-21,95;UBERON:0000073,1.44e-18,54;UBERON:0002346,2.74e-18,64;UBERON:0003075,2.74e-18,64;UBERON:0007284,2.74e-18,64;UBERON:0001049,3.77e-17,52;UBERON:0005068,3.77e-17,52;UBERON:0006241,3.77e-17,52;UBERON:0007135,3.77e-17,52;UBERON:0010371,9.29e-16,73;UBERON:0000955,1.45e-14,47;UBERON:0006238,1.45e-14,47;UBERON:0002616,5.45e-14,46;UBERON:0010314,4.20e-13,92;UBERON:0002020,1.41e-12,34;UBERON:0003056,7.25e-12,49;UBERON:0003080,1.37e-11,40;UBERON:0002780,5.24e-11,39;UBERON:0001890,5.24e-11,39;UBERON:0006240,5.24e-11,39;UBERON:0003528,4.27e-10,29;UBERON:0002791,4.27e-10,29;UBERON:0001893,4.27e-10,29;UBERON:0000025,8.80e-08,114;UBERON:0002021,1.14e-07,10;UBERON:0000411,1.14e-07,10;UBERON:0001950,1.14e-07,10;UBERON:0002619,3.52e-07,17;UBERON:0000956,4.03e-07,21;UBERON:0001869,4.03e-07,21;UBERON:0000203,4.03e-07,21;UBERON:0004111,4.22e-07,122|phase1_expression=5.2849119544582,0.348975407639361,0.454999239389536,0,1.00179145989269,0.33575854382378,0.934450562382103,0.903863264091034,0.563154888606667,1.87251621057595,2.73948749160808,2.47293692885543,0.684802919724823,1.13646523144697,1.99865857089398,2.02475267389826,0.699561878128147,1.89277299214943,2.33094537129756,2.12194825899015,6.29320347117916,6.056748023254,4.96279599363977,1.91990907352088,0.45881856213434,1.14846392823004,1.29228598847722,0.646413698057667,1.14014051673824,0.756090389279792,1.77384408524244,2.54012269383853,3.07532393792285,0,1.44425809875637,0.831173226792462,1.02084678131185,0.837063261473815,0.7813353445238,0,1.17646297606203,0.683045484958446,0.971020706062307,3.39921408534059,3.14268486780495,3.67093504323363,3.9119567217402,3.48840250208714,5.27246838562732,8.1660557611199,3.91961980551015,4.31257693094915,0.838913030288682,0.725362142011344,0.336093799142464,2.57259436035947,6.30373567865265,2.06268836910977,3.03474691289397,2.11596391708813,3.80298842103708,0.677689064138264,0.889294796111139,2.2497492932035,3.9554654502679,1.4209602298922,6.5912024314049,7.68436610643109,2.17748185847803,2.8351247049655,2.73422449756797,11.7116903605559,9.718215801871,1.71487118900936,2.39613677545591,1.83843757322004,30.8324466798288,22.0899094887375,14.5926206593431,3.03338461779446,3.56801810049398,3.12548022334056,15.6342479440773,20.2594539611405,17.4190002465564,13.258286346315,10.2507610175354,6.33758115806022,4.24066682665831,4.08086424576642,2.31891590961342,0.860423876981386,1.3599426674155,4.85732872474035,5.84798775702902,3.58421509677868,2.10666630197628,4.09032774187339,4.67614808285164,4.59341446863442,2.67602497575693,1.28326477414318,2.54805239706646,7.11066703153331,0.649473123033642,0.506719730950197,0.505524445014783,3.31133251185274,2.07150306917737,1.92974780784272,1.56136794089522,1.52232739156071,1.38369298353635,2.71300752994721,2.4693628498498,1.13099932196708,1.73036477414062,1.73519228303894,0.884610551949874,2.58826959915855,1.98757366614354,1.45462575940567,3.72783522436244,11.1256702864388,7.54008144528438,1.53274233125155,4.31334448221313,7.19883277192089,5.33694953706872,16.77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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67878 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=28bp_to_ENSMUST00000163028_5end | |||
|cluster_id=chr5:67652164..67652209,+ | |||
|description=CAGE_peak_6_at_Tmem33_5end | |||
|id=chr5:67652164..67652209,+ | |||
|ontology_enrichment_celltype=CL:0002319!6.61e-11!43;CL:0000221!7.83e-11!44;CL:0000133!7.83e-11!44;CL:0000055!1.72e-10!50;CL:0000393!2.94e-08!39;CL:0000211!2.94e-08!39;CL:0000540!6.93e-08!33;CL:0000047!6.93e-08!33;CL:0000031!6.93e-08!33;CL:0000404!6.93e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.47e-11,43;CL:0000221,7.66e-11,44;CL:0000133,7.66e-11,44;CL:0000393,2.90e-08,39;CL:0000211,2.90e-08,39;CL:0000540,6.84e-08,33;CL:0000047,6.84e-08,33;CL:0000031,6.84e-08,33;CL:0000404,6.84e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.07e-25!75;UBERON:0001016!3.07e-25!75;UBERON:0001017!1.39e-24!73;UBERON:0005743!1.39e-24!73;UBERON:0004121!4.39e-18!102;UBERON:0000924!4.39e-18!102;UBERON:0006601!4.39e-18!102;UBERON:0001049!3.90e-17!52;UBERON:0005068!3.90e-17!52;UBERON:0006241!3.90e-17!52;UBERON:0007135!3.90e-17!52;UBERON:0000955!1.75e-16!50;UBERON:0006238!1.75e-16!50;UBERON:0002616!6.88e-16!49;UBERON:0000033!7.33e-16!63;UBERON:0002346!6.64e-15!71;UBERON:0003075!6.64e-15!71;UBERON:0007284!6.64e-15!71;UBERON:0002020!1.45e-12!34;UBERON:0007811!6.92e-12!86;UBERON:0003056!7.42e-12!49;UBERON:0003080!1.40e-11!40;UBERON:0002780!5.35e-11!39;UBERON:0001890!5.35e-11!39;UBERON:0006240!5.35e-11!39;UBERON:0000153!1.09e-10!94;UBERON:0002791!4.36e-10!29;UBERON:0003528!4.36e-10!29;UBERON:0001893!4.36e-10!29;UBERON:0000025!8.55e-08!114;UBERON:0002021!1.15e-07!10;UBERON:0000411!1.15e-07!10;UBERON:0001950!1.15e-07!10;UBERON:0002619!3.57e-07!17;UBERON:0004111!3.87e-07!122;UBERON:0000956!4.08e-07!21;UBERON:0001869!4.08e-07!21;UBERON:0000203!4.08e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.91e-25,75;UBERON:0001017,1.32e-24,73;UBERON:0004121,5.46e-21,95;UBERON:0000924,5.46e-21,95;UBERON:0006601,5.46e-21,95;UBERON:0000073,1.44e-18,54;UBERON:0002346,2.74e-18,64;UBERON:0003075,2.74e-18,64;UBERON:0007284,2.74e-18,64;UBERON:0001049,3.77e-17,52;UBERON:0005068,3.77e-17,52;UBERON:0006241,3.77e-17,52;UBERON:0007135,3.77e-17,52;UBERON:0010371,9.29e-16,73;UBERON:0000955,1.45e-14,47;UBERON:0006238,1.45e-14,47;UBERON:0002616,5.45e-14,46;UBERON:0010314,4.20e-13,92;UBERON:0002020,1.41e-12,34;UBERON:0003056,7.25e-12,49;UBERON:0003080,1.37e-11,40;UBERON:0002780,5.24e-11,39;UBERON:0001890,5.24e-11,39;UBERON:0006240,5.24e-11,39;UBERON:0003528,4.27e-10,29;UBERON:0002791,4.27e-10,29;UBERON:0001893,4.27e-10,29;UBERON:0000025,8.80e-08,114;UBERON:0002021,1.14e-07,10;UBERON:0000411,1.14e-07,10;UBERON:0001950,1.14e-07,10;UBERON:0002619,3.52e-07,17;UBERON:0000956,4.03e-07,21;UBERON:0001869,4.03e-07,21;UBERON:0000203,4.03e-07,21;UBERON:0004111,4.22e-07,122 | |||
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| |||
|short_description=p6@Tmem33 | |||
}} |
Revision as of 13:36, 4 August 2015
Short description: | p6@Tmem33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tmem33_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 28bp_to_ENSMUST00000163028_5end |
EntrezGene: | 67878 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.47e-11 | 43 |
ectodermal cell | 7.66e-11 | 44 |
neurectodermal cell | 7.66e-11 | 44 |
electrically responsive cell | 2.90e-08 | 39 |
electrically active cell | 2.90e-08 | 39 |
neuron | 6.84e-08 | 33 |
neuronal stem cell | 6.84e-08 | 33 |
neuroblast | 6.84e-08 | 33 |
electrically signaling cell | 6.84e-08 | 33 |