FFCP PHASE1:Mm9::chr9:108953604..108953618,+: Difference between revisions
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{{FFCP|EntrezGene=66940|HGNC=|MCL_coexpression_id=21|UniProt=G3UWC7|association_with_transcript=0bp_to_ENSMUST00000059097_5end|description=CAGE_peak_5_at_Shisa5_5end|id=chr9:108953604..108953618,+|ontology_enrichment_celltype=CL:0000791!4.84e-10!9;CL:0000789!4.84e-10!9;CL:0002420!4.84e-10!9;CL:0002419!4.84e-10!9;CL:0000790!4.84e-10!9;CL:0000624!4.15e-09!8;CL:0000838!1.42e-08!12;CL:0000542!1.25e-07!13;CL:0000051!1.25e-07!13;CL:0000084!1.30e-07!11;CL:0000827!1.30e-07!11;CL:0000893!4.37e-07!6;CL:0002489!4.37e-07!6;CL:0000898!4.37e-07!6;CL:0000809!4.37e-07!6;CL:0000810!4.37e-07!6;CL:0000895!4.37e-07!6;CL:0000808!4.37e-07!6;CL:0000894!4.37e-07!6;CL:0000806!4.37e-07!6;CL:0000807!4.37e-07!6;CL:0000805!4.37e-07!6;CL:0002425!4.37e-07!6;CL:0002436!4.37e-07!6;CL:0002427!4.37e-07!6;CL:0002428!4.37e-07!6;CL:0002429!4.37e-07!6;CL:0002433!4.37e-07!6;CL:0002431!4.37e-07!6;CL:0002432!4.37e-07!6;CL:0002031!5.47e-07!25|ontology_enrichment_celltype_v019_2=CL:0000791,2.03e-17,9;CL:0000789,2.03e-17,9;CL:0002420,2.03e-17,9;CL:0002419,2.03e-17,9;CL:0000790,2.03e-17,9;CL:0000624,1.13e-15,8;CL:0000838,1.13e-15,12;CL:0002031,5.35e-15,25;CL:0000542,2.85e-14,13;CL:0000051,2.85e-14,13;CL:0000084,7.40e-14,11;CL:0000827,7.40e-14,11;CL:0000893,6.65e-12,6;CL:0002489,6.65e-12,6;CL:0000898,6.65e-12,6;CL:0000809,6.65e-12,6;CL:0000810,6.65e-12,6;CL:0000895,6.65e-12,6;CL:0000808,6.65e-12,6;CL:0000894,6.65e-12,6;CL:0000806,6.65e-12,6;CL:0000807,6.65e-12,6;CL:0000805,6.65e-12,6;CL:0002425,6.65e-12,6;CL:0002436,6.65e-12,6;CL:0002427,6.65e-12,6;CL:0002428,6.65e-12,6;CL:0002429,6.65e-12,6;CL:0002433,6.65e-12,6;CL:0002431,6.65e-12,6;CL:0002432,6.65e-12,6;CL:0000988,8.05e-11,32;CL:0002032,8.05e-11,32;CL:0000037,8.05e-11,32;CL:0000837,8.05e-11,32;CL:0000738,2.50e-10,17;CL:0002087,2.50e-10,17;CL:0000553,3.61e-08,6;CL:0000556,3.61e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!8.60e-18!29;UBERON:0002193!3.57e-16!48;UBERON:0003408!1.55e-15!24;UBERON:0002370!5.08e-15!23;UBERON:0000974!5.08e-15!23;UBERON:0004807!5.08e-15!23;UBERON:0005058!5.08e-15!23;UBERON:0003351!5.08e-15!23;UBERON:0009113!5.08e-15!23;UBERON:0003295!5.08e-15!23;UBERON:0009722!5.08e-15!23;UBERON:0005562!5.08e-15!23;UBERON:0007690!5.08e-15!23;UBERON:0006562!4.71e-14!24;UBERON:0001557!4.71e-14!24;UBERON:0001042!4.71e-14!24;UBERON:0008814!4.71e-14!24;UBERON:0009145!4.71e-14!24;UBERON:0002390!5.88e-14!45;UBERON:0003061!5.88e-14!45;UBERON:0001004!6.22e-12!42;UBERON:0002405!6.22e-12!70;UBERON:0000072!1.32e-11!27;UBERON:0000065!1.91e-11!41;UBERON:0005057!4.81e-11!51;UBERON:0003081!2.67e-09!88;UBERON:0000063!8.43e-09!35;UBERON:0001041!6.12e-08!92;UBERON:0000077!8.83e-08!97;UBERON:0004119!1.86e-07!130;UBERON:0000925!1.86e-07!130;UBERON:0006595!1.86e-07!130;UBERON:0001007!2.19e-07!128;UBERON:0001555!2.19e-07!128;UBERON:0007026!2.19e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.99e-33,48;UBERON:0002405,4.99e-33,48;UBERON:0004177,8.47e-32,29;UBERON:0005057,8.47e-32,29;UBERON:0002390,1.16e-28,45;UBERON:0003061,1.16e-28,45;UBERON:0002370,2.88e-28,23;UBERON:0000974,2.88e-28,23;UBERON:0004807,2.88e-28,23;UBERON:0005058,2.88e-28,23;UBERON:0003351,2.88e-28,23;UBERON:0009113,2.88e-28,23;UBERON:0003295,2.88e-28,23;UBERON:0009722,2.88e-28,23;UBERON:0005562,2.88e-28,23;UBERON:0007690,2.88e-28,23;UBERON:0006562,7.46e-27,24;UBERON:0003408,7.46e-27,24;UBERON:0001557,7.46e-27,24;UBERON:0001042,7.46e-27,24;UBERON:0008814,7.46e-27,24;UBERON:0009145,7.46e-27,24;UBERON:0000077,3.45e-25,35;UBERON:0000072,3.04e-23,27;UBERON:0000065,6.44e-20,41;UBERON:0001004,2.75e-19,42;UBERON:0007811,4.74e-16,36;UBERON:0000153,1.46e-12,43;UBERON:0003081,5.57e-12,87;UBERON:0001041,5.38e-11,80;UBERON:0005911,2.75e-09,69;UBERON:0003929,1.07e-08,55;UBERON:0002530,3.03e-08,65;UBERON:0002368,1.46e-07,60;UBERON:0000926,2.98e-07,120;UBERON:0004120,2.98e-07,120;UBERON:0006603,2.98e-07,120;UBERON:0000949,6.30e-07,72;UBERON:0001007,9.81e-07,116;UBERON:0001555,9.81e-07,116;UBERON:0007026,9.81e-07,116|phase1_expression=0,0,0,0,0,0,0,156.110098040866,38.7168985917084,42.5997437906028,9.75942418885378,8.13676021752431,79.6083394180107,104.205119683445,5.3297561890506,8.70643649776252,0,52.9976437801839,41.6827878161446,44.1365237869951,1.53077922271926,0,0,3.67982572424835,2.98232065387321,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.2205643020345,52.9514363668281,32.601098516819,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,2.62622923353838,57.2252722860249,0.29688427812965,0,0,0,0,0,0.251333182659351,0,0.86759614151947,0.884610551949874,0.161766849947409,0.662524555381181,0,0,0,0,0.510914110417183,0.718890747035522,0,0.254140454146129,0,0,0,0,0,0,0,0,1.11966273549084,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.438599962275997,0.439100230582101,0,0,0,0.660837565967596,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0.502670417600539,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0.757736633841335,0.179397413521912,0,4.61882975416512,0,0,0,0,0,0,0,0.788175720530955,0.44292937929755,1.59454768657487,3.27726629431476,1.72684981865896,0.723245292907558,0,0,1.47529281905711,2.20749397043786,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0,2.21225730555071,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0.18542530201051,17.2579589605831,0,0.370389054739423,3.20226376907975,13.2593400889394,8.69357058184786,3.73952545986482,3.21888340344413,5.11339903076368,0,0,0,0,0,0,0,0.0826534557253359,0,0.518459893167171,0.621339313086926,0,0,0.330916980914195,1.16670713006429,0,0.168956125490778,0,0,0.314578033277133,0,0,24.0168451677415,1.01362607645082,1.54066435747241,4.80707045017842,4.833720783022,5.56307793387542,11.538763153917,10.6336459565696,10.7024436945036,10.36412570508,10.1834446988209,18.127165817594,11.8340565217605,19.518442664322,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0.467863216890817,0.429742108096597,0,0.661774257358546,0.927471342481686|short_description=p5@Shisa5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66940 | |||
|HGNC= | |||
|MCL_coexpression_id=21 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UWC7 | |||
|association_with_transcript=0bp_to_ENSMUST00000059097_5end | |||
|cluster_id=chr9:108953604..108953618,+ | |||
|description=CAGE_peak_5_at_Shisa5_5end | |||
|id=chr9:108953604..108953618,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.84e-10!9;CL:0000789!4.84e-10!9;CL:0002420!4.84e-10!9;CL:0002419!4.84e-10!9;CL:0000790!4.84e-10!9;CL:0000624!4.15e-09!8;CL:0000838!1.42e-08!12;CL:0000542!1.25e-07!13;CL:0000051!1.25e-07!13;CL:0000084!1.30e-07!11;CL:0000827!1.30e-07!11;CL:0000893!4.37e-07!6;CL:0002489!4.37e-07!6;CL:0000898!4.37e-07!6;CL:0000809!4.37e-07!6;CL:0000810!4.37e-07!6;CL:0000895!4.37e-07!6;CL:0000808!4.37e-07!6;CL:0000894!4.37e-07!6;CL:0000806!4.37e-07!6;CL:0000807!4.37e-07!6;CL:0000805!4.37e-07!6;CL:0002425!4.37e-07!6;CL:0002436!4.37e-07!6;CL:0002427!4.37e-07!6;CL:0002428!4.37e-07!6;CL:0002429!4.37e-07!6;CL:0002433!4.37e-07!6;CL:0002431!4.37e-07!6;CL:0002432!4.37e-07!6;CL:0002031!5.47e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.03e-17,9;CL:0000789,2.03e-17,9;CL:0002420,2.03e-17,9;CL:0002419,2.03e-17,9;CL:0000790,2.03e-17,9;CL:0000624,1.13e-15,8;CL:0000838,1.13e-15,12;CL:0002031,5.35e-15,25;CL:0000542,2.85e-14,13;CL:0000051,2.85e-14,13;CL:0000084,7.40e-14,11;CL:0000827,7.40e-14,11;CL:0000893,6.65e-12,6;CL:0002489,6.65e-12,6;CL:0000898,6.65e-12,6;CL:0000809,6.65e-12,6;CL:0000810,6.65e-12,6;CL:0000895,6.65e-12,6;CL:0000808,6.65e-12,6;CL:0000894,6.65e-12,6;CL:0000806,6.65e-12,6;CL:0000807,6.65e-12,6;CL:0000805,6.65e-12,6;CL:0002425,6.65e-12,6;CL:0002436,6.65e-12,6;CL:0002427,6.65e-12,6;CL:0002428,6.65e-12,6;CL:0002429,6.65e-12,6;CL:0002433,6.65e-12,6;CL:0002431,6.65e-12,6;CL:0002432,6.65e-12,6;CL:0000988,8.05e-11,32;CL:0002032,8.05e-11,32;CL:0000037,8.05e-11,32;CL:0000837,8.05e-11,32;CL:0000738,2.50e-10,17;CL:0002087,2.50e-10,17;CL:0000553,3.61e-08,6;CL:0000556,3.61e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.60e-18!29;UBERON:0002193!3.57e-16!48;UBERON:0003408!1.55e-15!24;UBERON:0002370!5.08e-15!23;UBERON:0000974!5.08e-15!23;UBERON:0004807!5.08e-15!23;UBERON:0005058!5.08e-15!23;UBERON:0003351!5.08e-15!23;UBERON:0009113!5.08e-15!23;UBERON:0003295!5.08e-15!23;UBERON:0009722!5.08e-15!23;UBERON:0005562!5.08e-15!23;UBERON:0007690!5.08e-15!23;UBERON:0006562!4.71e-14!24;UBERON:0001557!4.71e-14!24;UBERON:0001042!4.71e-14!24;UBERON:0008814!4.71e-14!24;UBERON:0009145!4.71e-14!24;UBERON:0002390!5.88e-14!45;UBERON:0003061!5.88e-14!45;UBERON:0001004!6.22e-12!42;UBERON:0002405!6.22e-12!70;UBERON:0000072!1.32e-11!27;UBERON:0000065!1.91e-11!41;UBERON:0005057!4.81e-11!51;UBERON:0003081!2.67e-09!88;UBERON:0000063!8.43e-09!35;UBERON:0001041!6.12e-08!92;UBERON:0000077!8.83e-08!97;UBERON:0004119!1.86e-07!130;UBERON:0000925!1.86e-07!130;UBERON:0006595!1.86e-07!130;UBERON:0001007!2.19e-07!128;UBERON:0001555!2.19e-07!128;UBERON:0007026!2.19e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.99e-33,48;UBERON:0002405,4.99e-33,48;UBERON:0004177,8.47e-32,29;UBERON:0005057,8.47e-32,29;UBERON:0002390,1.16e-28,45;UBERON:0003061,1.16e-28,45;UBERON:0002370,2.88e-28,23;UBERON:0000974,2.88e-28,23;UBERON:0004807,2.88e-28,23;UBERON:0005058,2.88e-28,23;UBERON:0003351,2.88e-28,23;UBERON:0009113,2.88e-28,23;UBERON:0003295,2.88e-28,23;UBERON:0009722,2.88e-28,23;UBERON:0005562,2.88e-28,23;UBERON:0007690,2.88e-28,23;UBERON:0006562,7.46e-27,24;UBERON:0003408,7.46e-27,24;UBERON:0001557,7.46e-27,24;UBERON:0001042,7.46e-27,24;UBERON:0008814,7.46e-27,24;UBERON:0009145,7.46e-27,24;UBERON:0000077,3.45e-25,35;UBERON:0000072,3.04e-23,27;UBERON:0000065,6.44e-20,41;UBERON:0001004,2.75e-19,42;UBERON:0007811,4.74e-16,36;UBERON:0000153,1.46e-12,43;UBERON:0003081,5.57e-12,87;UBERON:0001041,5.38e-11,80;UBERON:0005911,2.75e-09,69;UBERON:0003929,1.07e-08,55;UBERON:0002530,3.03e-08,65;UBERON:0002368,1.46e-07,60;UBERON:0000926,2.98e-07,120;UBERON:0004120,2.98e-07,120;UBERON:0006603,2.98e-07,120;UBERON:0000949,6.30e-07,72;UBERON:0001007,9.81e-07,116;UBERON:0001555,9.81e-07,116;UBERON:0007026,9.81e-07,116 | |||
|phase1_expression=0,0,0,0,0,0,0,156.110098040866,38.7168985917084,42.5997437906028,9.75942418885378,8.13676021752431,79.6083394180107,104.205119683445,5.3297561890506,8.70643649776252,0,52.9976437801839,41.6827878161446,44.1365237869951,1.53077922271926,0,0,3.67982572424835,2.98232065387321,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.2205643020345,52.9514363668281,32.601098516819,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,2.62622923353838,57.2252722860249,0.29688427812965,0,0,0,0,0,0.251333182659351,0,0.86759614151947,0.884610551949874,0.161766849947409,0.662524555381181,0,0,0,0,0.510914110417183,0.718890747035522,0,0.254140454146129,0,0,0,0,0,0,0,0,1.11966273549084,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.438599962275997,0.439100230582101,0,0,0,0.660837565967596,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0.502670417600539,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0.757736633841335,0.179397413521912,0,4.61882975416512,0,0,0,0,0,0,0,0.788175720530955,0.44292937929755,1.59454768657487,3.27726629431476,1.72684981865896,0.723245292907558,0,0,1.47529281905711,2.20749397043786,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0,2.21225730555071,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0.18542530201051,17.2579589605831,0,0.370389054739423,3.20226376907975,13.2593400889394,8.69357058184786,3.73952545986482,3.21888340344413,5.11339903076368,0,0,0,0,0,0,0,0.0826534557253359,0,0.518459893167171,0.621339313086926,0,0,0.330916980914195,1.16670713006429,0,0.168956125490778,0,0,0.314578033277133,0,0,24.0168451677415,1.01362607645082,1.54066435747241,4.80707045017842,4.833720783022,5.56307793387542,11.538763153917,10.6336459565696,10.7024436945036,10.36412570508,10.1834446988209,18.127165817594,11.8340565217605,19.518442664322,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0.467863216890817,0.429742108096597,0,0.661774257358546,0.927471342481686 | |||
|short_description=p5@Shisa5 | |||
}} |
Revision as of 14:14, 4 August 2015
Short description: | p5@Shisa5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Shisa5_5end |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | 0bp_to_ENSMUST00000059097_5end |
EntrezGene: | 66940 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data