FFCP PHASE1:Mm9::chr7:25857306..25857385,-: Difference between revisions
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{{FFCP|EntrezGene=14809|HGNC=|MCL_coexpression_id=3616|UniProt=G5E822,Q80WU3,Q2TAX1|association_with_transcript=2bp_to_ENSMUST00000003468,NM_008168,uc009frh.2,uc009fri.2_5end|description=CAGE_peak_2_at_Grik5_5end|id=chr7:25857306..25857385,-|ontology_enrichment_celltype=CL:0000540!1.03e-13!33;CL:0000047!1.03e-13!33;CL:0000031!1.03e-13!33;CL:0000404!1.03e-13!33;CL:0000221!1.22e-13!44;CL:0000133!1.22e-13!44;CL:0002319!1.43e-13!43;CL:0000117!2.16e-11!23;CL:0000337!2.16e-11!23;CL:0000393!5.25e-10!39;CL:0000211!5.25e-10!39;CL:0000055!1.00e-09!50|ontology_enrichment_celltype_v019_2=CL:0000221,1.86e-15,44;CL:0000133,1.86e-15,44;CL:0002319,2.20e-15,43;CL:0000540,5.12e-15,33;CL:0000047,5.12e-15,33;CL:0000031,5.12e-15,33;CL:0000404,5.12e-15,33;CL:0000117,1.91e-12,23;CL:0000337,1.91e-12,23;CL:0000393,2.68e-10,39;CL:0000211,2.68e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.69e-33!73;UBERON:0005743!1.69e-33!73;UBERON:0000073!2.39e-31!75;UBERON:0001016!2.39e-31!75;UBERON:0002346!1.17e-26!71;UBERON:0003075!1.17e-26!71;UBERON:0007284!1.17e-26!71;UBERON:0004121!1.30e-26!102;UBERON:0000924!1.30e-26!102;UBERON:0006601!1.30e-26!102;UBERON:0001049!3.06e-25!52;UBERON:0005068!3.06e-25!52;UBERON:0006241!3.06e-25!52;UBERON:0007135!3.06e-25!52;UBERON:0000955!3.59e-23!50;UBERON:0006238!3.59e-23!50;UBERON:0000033!7.27e-23!63;UBERON:0002616!1.90e-22!49;UBERON:0003056!5.72e-22!49;UBERON:0003080!7.23e-21!40;UBERON:0002780!1.63e-20!39;UBERON:0001890!1.63e-20!39;UBERON:0006240!1.63e-20!39;UBERON:0002020!1.12e-19!34;UBERON:0002791!1.91e-16!29;UBERON:0003528!1.91e-16!29;UBERON:0001893!1.91e-16!29;UBERON:0000956!2.04e-12!21;UBERON:0001869!2.04e-12!21;UBERON:0000203!2.04e-12!21;UBERON:0000153!1.77e-11!94;UBERON:0002619!2.92e-10!17;UBERON:0007811!8.85e-10!86;UBERON:0000025!7.54e-09!114;UBERON:0004111!6.24e-08!122;UBERON:0002021!2.28e-07!10;UBERON:0000411!2.28e-07!10;UBERON:0001950!2.28e-07!10;UBERON:0000468!2.38e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.86e-37,73;UBERON:0001016,3.28e-35,75;UBERON:0002346,6.16e-31,64;UBERON:0003075,6.16e-31,64;UBERON:0007284,6.16e-31,64;UBERON:0004121,5.06e-29,95;UBERON:0000924,5.06e-29,95;UBERON:0006601,5.06e-29,95;UBERON:0000073,8.34e-29,54;UBERON:0001049,4.12e-28,52;UBERON:0005068,4.12e-28,52;UBERON:0006241,4.12e-28,52;UBERON:0007135,4.12e-28,52;UBERON:0000955,5.15e-25,47;UBERON:0006238,5.15e-25,47;UBERON:0010371,1.01e-24,73;UBERON:0002616,3.25e-24,46;UBERON:0003056,3.67e-24,49;UBERON:0003080,6.11e-23,40;UBERON:0002780,1.50e-22,39;UBERON:0001890,1.50e-22,39;UBERON:0006240,1.50e-22,39;UBERON:0002020,1.27e-21,34;UBERON:0010314,1.58e-21,92;UBERON:0003528,4.84e-18,29;UBERON:0002791,4.84e-18,29;UBERON:0001893,4.84e-18,29;UBERON:0000956,1.40e-13,21;UBERON:0001869,1.40e-13,21;UBERON:0000203,1.40e-13,21;UBERON:0002619,3.41e-11,17;UBERON:0002021,5.42e-08,10;UBERON:0000411,5.42e-08,10;UBERON:0001950,5.42e-08,10;UBERON:0000025,9.27e-08,114;UBERON:0004111,6.02e-07,122|phase1_expression=1.76163731815273,0,0,0,0,0,0,0.516493293766305,0,0,0.171217968225505,0,0.342401459862411,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.881277725829041,0.811015449756117,0.367093504323363,0,2.8343270329458,5.71184075109627,3.4997381833371,2.2397827460058,4.31257693094915,0,0,0,0,0.573066879877513,0,5.05791152148994,7.40587370980846,5.07065122804943,0,1.77858959222228,0,0,0,3.59520132622086,6.14749288514487,5.28817022773236,5.8052553482627,5.46844899513593,9.71213346972932,5.96345060569357,4.89963196859816,7.3801012684042,1.83843757322004,1.10115880999389,5.36286819957788,5.37622866396852,5.53922408466814,13.0827330351446,4.16730696445408,2.79182999001381,2.8138130501584,5.50073691996516,8.2496003932627,8.68467252874528,7.45597783301202,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.561777680527007,0,0,0,1.97180787687353,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.890652834388949,2.77576522825817,1.52232739156071,1.15307748628029,0.904335843315735,2.23418543557839,0.879666139307728,0.247194967734374,1.3013942122792,0,0.970601099684455,0.441683036920787,0.969750506270444,0,4.39171195517321,18.6407569063975,0.510914110417183,0.239630249011841,0,0.381210681219194,3.2953940669061,12.8100168789215,17.591609295801,8.8650403298061,12.0186264945255,5.40248915854856,12.4925772562173,2.64782346010822,0.746441823660558,0.252722758433675,2.10441855886474,3.25301107406759,1.60931473103431,2.52086981727489,1.80845781402858,4.21826294738233,2.17793324484245,2.62364828767241,1.81092359517311,3.23351989399263,3.9712276835242,3.87092473160687,4.82230611340665,5.83899223373756,2.43776516565517,1.4404749548556,2.18937693500343,0,0.257347907114715,0.284163499395593,2.27838349789052,2.81431271977315,1.98068267607116,0.710234206755631,1.77087808572663,2.77680803197281,0.697601834251224,2.14618721119695,1.75148013550754,1.15191894939436,0.492502392237286,0.729619285912702,0.292399974850665,0.878200461164203,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14809 | |||
|HGNC= | |||
|MCL_coexpression_id=3616 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G5E822,uniprot:Q80WU3,uniprot:Q2TAX1 | |||
|association_with_transcript=2bp_to_ENSMUST00000003468,NM_008168,uc009frh.2,uc009fri.2_5end | |||
|cluster_id=chr7:25857306..25857385,- | |||
|description=CAGE_peak_2_at_Grik5_5end | |||
|id=chr7:25857306..25857385,- | |||
|ontology_enrichment_celltype=CL:0000540!1.03e-13!33;CL:0000047!1.03e-13!33;CL:0000031!1.03e-13!33;CL:0000404!1.03e-13!33;CL:0000221!1.22e-13!44;CL:0000133!1.22e-13!44;CL:0002319!1.43e-13!43;CL:0000117!2.16e-11!23;CL:0000337!2.16e-11!23;CL:0000393!5.25e-10!39;CL:0000211!5.25e-10!39;CL:0000055!1.00e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.86e-15,44;CL:0000133,1.86e-15,44;CL:0002319,2.20e-15,43;CL:0000540,5.12e-15,33;CL:0000047,5.12e-15,33;CL:0000031,5.12e-15,33;CL:0000404,5.12e-15,33;CL:0000117,1.91e-12,23;CL:0000337,1.91e-12,23;CL:0000393,2.68e-10,39;CL:0000211,2.68e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.69e-33!73;UBERON:0005743!1.69e-33!73;UBERON:0000073!2.39e-31!75;UBERON:0001016!2.39e-31!75;UBERON:0002346!1.17e-26!71;UBERON:0003075!1.17e-26!71;UBERON:0007284!1.17e-26!71;UBERON:0004121!1.30e-26!102;UBERON:0000924!1.30e-26!102;UBERON:0006601!1.30e-26!102;UBERON:0001049!3.06e-25!52;UBERON:0005068!3.06e-25!52;UBERON:0006241!3.06e-25!52;UBERON:0007135!3.06e-25!52;UBERON:0000955!3.59e-23!50;UBERON:0006238!3.59e-23!50;UBERON:0000033!7.27e-23!63;UBERON:0002616!1.90e-22!49;UBERON:0003056!5.72e-22!49;UBERON:0003080!7.23e-21!40;UBERON:0002780!1.63e-20!39;UBERON:0001890!1.63e-20!39;UBERON:0006240!1.63e-20!39;UBERON:0002020!1.12e-19!34;UBERON:0002791!1.91e-16!29;UBERON:0003528!1.91e-16!29;UBERON:0001893!1.91e-16!29;UBERON:0000956!2.04e-12!21;UBERON:0001869!2.04e-12!21;UBERON:0000203!2.04e-12!21;UBERON:0000153!1.77e-11!94;UBERON:0002619!2.92e-10!17;UBERON:0007811!8.85e-10!86;UBERON:0000025!7.54e-09!114;UBERON:0004111!6.24e-08!122;UBERON:0002021!2.28e-07!10;UBERON:0000411!2.28e-07!10;UBERON:0001950!2.28e-07!10;UBERON:0000468!2.38e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.86e-37,73;UBERON:0001016,3.28e-35,75;UBERON:0002346,6.16e-31,64;UBERON:0003075,6.16e-31,64;UBERON:0007284,6.16e-31,64;UBERON:0004121,5.06e-29,95;UBERON:0000924,5.06e-29,95;UBERON:0006601,5.06e-29,95;UBERON:0000073,8.34e-29,54;UBERON:0001049,4.12e-28,52;UBERON:0005068,4.12e-28,52;UBERON:0006241,4.12e-28,52;UBERON:0007135,4.12e-28,52;UBERON:0000955,5.15e-25,47;UBERON:0006238,5.15e-25,47;UBERON:0010371,1.01e-24,73;UBERON:0002616,3.25e-24,46;UBERON:0003056,3.67e-24,49;UBERON:0003080,6.11e-23,40;UBERON:0002780,1.50e-22,39;UBERON:0001890,1.50e-22,39;UBERON:0006240,1.50e-22,39;UBERON:0002020,1.27e-21,34;UBERON:0010314,1.58e-21,92;UBERON:0003528,4.84e-18,29;UBERON:0002791,4.84e-18,29;UBERON:0001893,4.84e-18,29;UBERON:0000956,1.40e-13,21;UBERON:0001869,1.40e-13,21;UBERON:0000203,1.40e-13,21;UBERON:0002619,3.41e-11,17;UBERON:0002021,5.42e-08,10;UBERON:0000411,5.42e-08,10;UBERON:0001950,5.42e-08,10;UBERON:0000025,9.27e-08,114;UBERON:0004111,6.02e-07,122 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0.516493293766305,0,0,0.171217968225505,0,0.342401459862411,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.881277725829041,0.811015449756117,0.367093504323363,0,2.8343270329458,5.71184075109627,3.4997381833371,2.2397827460058,4.31257693094915,0,0,0,0,0.573066879877513,0,5.05791152148994,7.40587370980846,5.07065122804943,0,1.77858959222228,0,0,0,3.59520132622086,6.14749288514487,5.28817022773236,5.8052553482627,5.46844899513593,9.71213346972932,5.96345060569357,4.89963196859816,7.3801012684042,1.83843757322004,1.10115880999389,5.36286819957788,5.37622866396852,5.53922408466814,13.0827330351446,4.16730696445408,2.79182999001381,2.8138130501584,5.50073691996516,8.2496003932627,8.68467252874528,7.45597783301202,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.561777680527007,0,0,0,1.97180787687353,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.890652834388949,2.77576522825817,1.52232739156071,1.15307748628029,0.904335843315735,2.23418543557839,0.879666139307728,0.247194967734374,1.3013942122792,0,0.970601099684455,0.441683036920787,0.969750506270444,0,4.39171195517321,18.6407569063975,0.510914110417183,0.239630249011841,0,0.381210681219194,3.2953940669061,12.8100168789215,17.591609295801,8.8650403298061,12.0186264945255,5.40248915854856,12.4925772562173,2.64782346010822,0.746441823660558,0.252722758433675,2.10441855886474,3.25301107406759,1.60931473103431,2.52086981727489,1.80845781402858,4.21826294738233,2.17793324484245,2.62364828767241,1.81092359517311,3.23351989399263,3.9712276835242,3.87092473160687,4.82230611340665,5.83899223373756,2.43776516565517,1.4404749548556,2.18937693500343,0,0.257347907114715,0.284163499395593,2.27838349789052,2.81431271977315,1.98068267607116,0.710234206755631,1.77087808572663,2.77680803197281,0.697601834251224,2.14618721119695,1.75148013550754,1.15191894939436,0.492502392237286,0.729619285912702,0.292399974850665,0.878200461164203,0.671032093801859,7.36014819974445,7.40913209130848,0,0.264450566663544,2.77274725695804,3.25131340604614,2.31961430379768,2.42020229548011,1.77902435075896,0.570676878337677,0.474529061544512,0.494096864172033,1.25667604400135,0.994782360205754,1.55971269695296,0,0.648414149624083,0.796565093017469,3.60369011810855,3.08470984046268,1.1270773567308,1.62921062276251,2.32742984601151,2.59502533594179,2.27651533647326,3.09981310757165,3.1399745568275,1.60416313098341,0,0.83422552858047,0.393117990226406,0.449724224769707,0.608580364165509,0,0,0.287696137450811,0.648540907100142,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0,0,0.369506380333209,1.13694847062291,1.14075483509418,1.18821560042632,1.64283173801951,2.01007508930179,0.952174563544055,1.95133647857799,2.20689201748667,1.99318220683897,1.75400245523236,0.81931657357869,0.518054945597687,1.3018415272336,0,0,0,0.275936746304732,2.56880943980467,4.10240903072711,0,0.252470927204373,3.47059041357882,2.73307121007647,3.66219776145758,1.19484398976276,2.22798674082394,2.83076530788832,4.45291771842384,3.79932615284705,6.7198922250909,11.2462460747632,1.56134093729095,4.27357448801413,3.25773918707152,1.48473110675282,1.32745138339963,2.6705869977048,1.81394134178851,0.377210159511796,0.590603785761546,1.22974059177571,1.29214146584111,1.09060118843252,0,1.58018378967908,0,1.03135543248187,1.70219802876894,4.68158844481407,4.39819524861365,4.71541477069503,3.19212420556092,2.67553226403106,4.93647061806363,6.69822888052118,0,0,0,0.65954501176592,0.968786560175433,0.301564624640779,0.716234064018819,0.328281799490123,1.45740418314925,2.22510362412612,0,1.03193433981611,1.11116716421827,0.188368457004691,0.410082683163076,0.686334519619568,1.18984900995699,1.39951452323658,1.38199973804424,0,2.84702394223022,1.62655573701479,2.37611749807963,1.25452977608681,1.74690050996942,0.944050424693745,1.90102948168273,2.35580347785627,0.90730481304255,0,1.12738587736838,1.79419855252775,1.98550188548517,2.72231663681667,2.71235629303235,3.37912250981556,3.87278887530988,1.95306577265925,1.67774951081137,0.483168241652012,0.576060012515731,0,1.41907650703115,0.410843828659309,0.51968329191118,0.537080087002444,0.596044064343795,0.240390899039938,0.147689527174577,0.302899349844443,0.304827226619999,0.100826185136841,0,0,0.116876902181569,0.453460767230423,0.221985953374065,0,0.167884616364078,1.73870634628971,0.563047426353546,0.73260649706906,0.428736758158132,1.00314420807073,8.471277639256,5.06357760157895,5.72895513439397,15.1230800462445,6.85082519770642,9.82012066606611,11.4753825039407,6.30449684513909,6.79713613476307,9.83744592328458,1.764384908931,0.399024873401031,2.56100408631201,3.40349403895612,1.88651846365184,1.10306105070008,1.55572709461131,1.44224540067226,1.28367683836726,1.51618327058278,1.52087579934144,2.07488975524684,1.96647165686753,2.11283002936069,2.12511235135769,0.952587382566147,1.27472758539341,3.27945674788299,2.06042950401653,1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| |||
|short_description=p2@Grik5 | |||
}} |
Revision as of 19:58, 4 August 2015
Short description: | p2@Grik5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Grik5_5end |
Coexpression cluster: | MCL_coexpression_mm9:3616 |
Association with transcript: | 2bp_to_ENSMUST00000003468, NM_008168, uc009frh.2, uc009fri.2_5end |
EntrezGene: | 14809 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.86e-15 | 44 |
neurectodermal cell | 1.86e-15 | 44 |
neural cell | 2.20e-15 | 43 |
neuron | 5.12e-15 | 33 |
neuronal stem cell | 5.12e-15 | 33 |
neuroblast | 5.12e-15 | 33 |
electrically signaling cell | 5.12e-15 | 33 |
CNS neuron (sensu Vertebrata) | 1.91e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.91e-12 | 23 |
electrically responsive cell | 2.68e-10 | 39 |
electrically active cell | 2.68e-10 | 39 |