FFCP PHASE1:Mm9::chr9:14708354..14708365,-: Difference between revisions
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{{FFCP|EntrezGene=64931|HGNC=|MCL_coexpression_id=29|UniProt=Q9EQF4|association_with_transcript=10bp_to_ENSMUST00000034409_5end|description=CAGE_peak_4_at_Folr4_5end|id=chr9:14708354..14708365,-|ontology_enrichment_celltype=CL:0000624!4.26e-18!8;CL:0000791!6.83e-16!9;CL:0000789!6.83e-16!9;CL:0002420!6.83e-16!9;CL:0002419!6.83e-16!9;CL:0000790!6.83e-16!9;CL:0000893!8.10e-14!6;CL:0002489!8.10e-14!6;CL:0000898!8.10e-14!6;CL:0000809!8.10e-14!6;CL:0000810!8.10e-14!6;CL:0000895!8.10e-14!6;CL:0000808!8.10e-14!6;CL:0000894!8.10e-14!6;CL:0000806!8.10e-14!6;CL:0000807!8.10e-14!6;CL:0000805!8.10e-14!6;CL:0002425!8.10e-14!6;CL:0002436!8.10e-14!6;CL:0002427!8.10e-14!6;CL:0002428!8.10e-14!6;CL:0002429!8.10e-14!6;CL:0002433!8.10e-14!6;CL:0002431!8.10e-14!6;CL:0002432!8.10e-14!6;CL:0000084!1.09e-12!11;CL:0000827!1.09e-12!11;CL:0000838!1.74e-11!12;CL:0000542!1.80e-10!13;CL:0000051!1.80e-10!13;CL:0002031!1.79e-08!25;CL:0000738!1.30e-07!17;CL:0002087!1.30e-07!17|ontology_enrichment_celltype_v019_2=CL:0000624,1.09e-59,8;CL:0000791,4.44e-53,9;CL:0000789,4.44e-53,9;CL:0002420,4.44e-53,9;CL:0002419,4.44e-53,9;CL:0000790,4.44e-53,9;CL:0000084,1.85e-43,11;CL:0000827,1.85e-43,11;CL:0000893,1.28e-40,6;CL:0002489,1.28e-40,6;CL:0000898,1.28e-40,6;CL:0000809,1.28e-40,6;CL:0000810,1.28e-40,6;CL:0000895,1.28e-40,6;CL:0000808,1.28e-40,6;CL:0000894,1.28e-40,6;CL:0000806,1.28e-40,6;CL:0000807,1.28e-40,6;CL:0000805,1.28e-40,6;CL:0002425,1.28e-40,6;CL:0002436,1.28e-40,6;CL:0002427,1.28e-40,6;CL:0002428,1.28e-40,6;CL:0002429,1.28e-40,6;CL:0002433,1.28e-40,6;CL:0002431,1.28e-40,6;CL:0002432,1.28e-40,6;CL:0000838,7.54e-40,12;CL:0000542,8.58e-37,13;CL:0000051,8.58e-37,13;CL:0000738,3.74e-28,17;CL:0002087,3.74e-28,17;CL:0002031,3.82e-19,25;CL:0000988,6.11e-15,32;CL:0002032,6.11e-15,32;CL:0000037,6.11e-15,32;CL:0000837,6.11e-15,32;CL:0000815,1.83e-11,1;CL:0000792,1.83e-11,1;CL:0002320,2.39e-10,46;CL:0000134,2.39e-10,46;CL:0000219,8.80e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!6.12e-31!29;UBERON:0002370!2.11e-30!23;UBERON:0000974!2.11e-30!23;UBERON:0004807!2.11e-30!23;UBERON:0005058!2.11e-30!23;UBERON:0003351!2.11e-30!23;UBERON:0009113!2.11e-30!23;UBERON:0003295!2.11e-30!23;UBERON:0009722!2.11e-30!23;UBERON:0005562!2.11e-30!23;UBERON:0007690!2.11e-30!23;UBERON:0006562!6.45e-29!24;UBERON:0003408!6.45e-29!24;UBERON:0001557!6.45e-29!24;UBERON:0001042!6.45e-29!24;UBERON:0008814!6.45e-29!24;UBERON:0009145!6.45e-29!24;UBERON:0000072!4.00e-25!27;UBERON:0002193!8.51e-24!48;UBERON:0002390!1.71e-23!45;UBERON:0003061!1.71e-23!45;UBERON:0000063!3.34e-18!35;UBERON:0000065!3.60e-18!41;UBERON:0001004!1.32e-17!42;UBERON:0005057!1.05e-16!51;UBERON:0002405!1.36e-15!70;UBERON:0002368!5.81e-12!60;UBERON:0003929!4.89e-11!55;UBERON:0003081!5.99e-11!88;UBERON:0002530!1.30e-10!65;UBERON:0005911!1.12e-09!69;UBERON:0000490!1.92e-09!66;UBERON:0000949!4.78e-09!72;UBERON:0001041!2.97e-08!92;UBERON:0000064!3.39e-08!99;UBERON:0000077!1.61e-07!97;UBERON:0000153!2.53e-07!94;UBERON:0007811!8.96e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.37e-15,23;UBERON:0000974,3.37e-15,23;UBERON:0004807,3.37e-15,23;UBERON:0005058,3.37e-15,23;UBERON:0003351,3.37e-15,23;UBERON:0009113,3.37e-15,23;UBERON:0003295,3.37e-15,23;UBERON:0009722,3.37e-15,23;UBERON:0005562,3.37e-15,23;UBERON:0007690,3.37e-15,23;UBERON:0006562,1.44e-14,24;UBERON:0003408,1.44e-14,24;UBERON:0001557,1.44e-14,24;UBERON:0001042,1.44e-14,24;UBERON:0008814,1.44e-14,24;UBERON:0009145,1.44e-14,24;UBERON:0000072,5.96e-13,27;UBERON:0004177,4.66e-12,29;UBERON:0005057,4.66e-12,29;UBERON:0000029,1.12e-10,1;UBERON:0001097,1.12e-10,1;UBERON:0003968,1.12e-10,1;UBERON:0001467,1.12e-10,1;UBERON:0002384,2.39e-10,46;UBERON:0000077,5.51e-10,35;UBERON:0002193,1.01e-09,48;UBERON:0002405,1.01e-09,48;UBERON:0007811,1.05e-09,36;UBERON:0000065,1.63e-08,41;UBERON:0001004,2.62e-08,42;UBERON:0000153,4.11e-08,43;UBERON:0002390,9.54e-08,45;UBERON:0003061,9.54e-08,45|phase1_expression=0.480446541314382,0,0,0,0,0,0,25.1790480711074,1.12630977721333,2.80877431586392,1.88339765048055,1.27635454392538,0.684802919724823,1.48614684112296,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0,0.205421914329655,0.649604114888975,0.179026695667481,0.596044064343795,1.08175904567972,0.886137163047463,0.504832249740738,0.838274873204998,0.403304740547362,0.877120926657772,0.769694733122636,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Folr4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:64931 | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9EQF4 | |||
|association_with_transcript=10bp_to_ENSMUST00000034409_5end | |||
|cluster_id=chr9:14708354..14708365,- | |||
|description=CAGE_peak_4_at_Folr4_5end | |||
|id=chr9:14708354..14708365,- | |||
|ontology_enrichment_celltype=CL:0000624!4.26e-18!8;CL:0000791!6.83e-16!9;CL:0000789!6.83e-16!9;CL:0002420!6.83e-16!9;CL:0002419!6.83e-16!9;CL:0000790!6.83e-16!9;CL:0000893!8.10e-14!6;CL:0002489!8.10e-14!6;CL:0000898!8.10e-14!6;CL:0000809!8.10e-14!6;CL:0000810!8.10e-14!6;CL:0000895!8.10e-14!6;CL:0000808!8.10e-14!6;CL:0000894!8.10e-14!6;CL:0000806!8.10e-14!6;CL:0000807!8.10e-14!6;CL:0000805!8.10e-14!6;CL:0002425!8.10e-14!6;CL:0002436!8.10e-14!6;CL:0002427!8.10e-14!6;CL:0002428!8.10e-14!6;CL:0002429!8.10e-14!6;CL:0002433!8.10e-14!6;CL:0002431!8.10e-14!6;CL:0002432!8.10e-14!6;CL:0000084!1.09e-12!11;CL:0000827!1.09e-12!11;CL:0000838!1.74e-11!12;CL:0000542!1.80e-10!13;CL:0000051!1.80e-10!13;CL:0002031!1.79e-08!25;CL:0000738!1.30e-07!17;CL:0002087!1.30e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.09e-59,8;CL:0000791,4.44e-53,9;CL:0000789,4.44e-53,9;CL:0002420,4.44e-53,9;CL:0002419,4.44e-53,9;CL:0000790,4.44e-53,9;CL:0000084,1.85e-43,11;CL:0000827,1.85e-43,11;CL:0000893,1.28e-40,6;CL:0002489,1.28e-40,6;CL:0000898,1.28e-40,6;CL:0000809,1.28e-40,6;CL:0000810,1.28e-40,6;CL:0000895,1.28e-40,6;CL:0000808,1.28e-40,6;CL:0000894,1.28e-40,6;CL:0000806,1.28e-40,6;CL:0000807,1.28e-40,6;CL:0000805,1.28e-40,6;CL:0002425,1.28e-40,6;CL:0002436,1.28e-40,6;CL:0002427,1.28e-40,6;CL:0002428,1.28e-40,6;CL:0002429,1.28e-40,6;CL:0002433,1.28e-40,6;CL:0002431,1.28e-40,6;CL:0002432,1.28e-40,6;CL:0000838,7.54e-40,12;CL:0000542,8.58e-37,13;CL:0000051,8.58e-37,13;CL:0000738,3.74e-28,17;CL:0002087,3.74e-28,17;CL:0002031,3.82e-19,25;CL:0000988,6.11e-15,32;CL:0002032,6.11e-15,32;CL:0000037,6.11e-15,32;CL:0000837,6.11e-15,32;CL:0000815,1.83e-11,1;CL:0000792,1.83e-11,1;CL:0002320,2.39e-10,46;CL:0000134,2.39e-10,46;CL:0000219,8.80e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.12e-31!29;UBERON:0002370!2.11e-30!23;UBERON:0000974!2.11e-30!23;UBERON:0004807!2.11e-30!23;UBERON:0005058!2.11e-30!23;UBERON:0003351!2.11e-30!23;UBERON:0009113!2.11e-30!23;UBERON:0003295!2.11e-30!23;UBERON:0009722!2.11e-30!23;UBERON:0005562!2.11e-30!23;UBERON:0007690!2.11e-30!23;UBERON:0006562!6.45e-29!24;UBERON:0003408!6.45e-29!24;UBERON:0001557!6.45e-29!24;UBERON:0001042!6.45e-29!24;UBERON:0008814!6.45e-29!24;UBERON:0009145!6.45e-29!24;UBERON:0000072!4.00e-25!27;UBERON:0002193!8.51e-24!48;UBERON:0002390!1.71e-23!45;UBERON:0003061!1.71e-23!45;UBERON:0000063!3.34e-18!35;UBERON:0000065!3.60e-18!41;UBERON:0001004!1.32e-17!42;UBERON:0005057!1.05e-16!51;UBERON:0002405!1.36e-15!70;UBERON:0002368!5.81e-12!60;UBERON:0003929!4.89e-11!55;UBERON:0003081!5.99e-11!88;UBERON:0002530!1.30e-10!65;UBERON:0005911!1.12e-09!69;UBERON:0000490!1.92e-09!66;UBERON:0000949!4.78e-09!72;UBERON:0001041!2.97e-08!92;UBERON:0000064!3.39e-08!99;UBERON:0000077!1.61e-07!97;UBERON:0000153!2.53e-07!94;UBERON:0007811!8.96e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.37e-15,23;UBERON:0000974,3.37e-15,23;UBERON:0004807,3.37e-15,23;UBERON:0005058,3.37e-15,23;UBERON:0003351,3.37e-15,23;UBERON:0009113,3.37e-15,23;UBERON:0003295,3.37e-15,23;UBERON:0009722,3.37e-15,23;UBERON:0005562,3.37e-15,23;UBERON:0007690,3.37e-15,23;UBERON:0006562,1.44e-14,24;UBERON:0003408,1.44e-14,24;UBERON:0001557,1.44e-14,24;UBERON:0001042,1.44e-14,24;UBERON:0008814,1.44e-14,24;UBERON:0009145,1.44e-14,24;UBERON:0000072,5.96e-13,27;UBERON:0004177,4.66e-12,29;UBERON:0005057,4.66e-12,29;UBERON:0000029,1.12e-10,1;UBERON:0001097,1.12e-10,1;UBERON:0003968,1.12e-10,1;UBERON:0001467,1.12e-10,1;UBERON:0002384,2.39e-10,46;UBERON:0000077,5.51e-10,35;UBERON:0002193,1.01e-09,48;UBERON:0002405,1.01e-09,48;UBERON:0007811,1.05e-09,36;UBERON:0000065,1.63e-08,41;UBERON:0001004,2.62e-08,42;UBERON:0000153,4.11e-08,43;UBERON:0002390,9.54e-08,45;UBERON:0003061,9.54e-08,45 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,25.1790480711074,1.12630977721333,2.80877431586392,1.88339765048055,1.27635454392538,0.684802919724823,1.48614684112296,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0,0.205421914329655,0.649604114888975,0.179026695667481,0.596044064343795,1.08175904567972,0.886137163047463,0.504832249740738,0.838274873204998,0.403304740547362,0.877120926657772,0.769694733122636,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Folr4 | |||
}} |
Revision as of 20:23, 4 August 2015
Short description: | p4@Folr4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Folr4_5end |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | 10bp_to_ENSMUST00000034409_5end |
EntrezGene: | 64931 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.37e-15 | 23 |
neck | 3.37e-15 | 23 |
respiratory system epithelium | 3.37e-15 | 23 |
hemolymphoid system gland | 3.37e-15 | 23 |
pharyngeal epithelium | 3.37e-15 | 23 |
thymic region | 3.37e-15 | 23 |
pharyngeal gland | 3.37e-15 | 23 |
entire pharyngeal arch endoderm | 3.37e-15 | 23 |
thymus primordium | 3.37e-15 | 23 |
early pharyngeal endoderm | 3.37e-15 | 23 |
pharynx | 1.44e-14 | 24 |
gland of gut | 1.44e-14 | 24 |
upper respiratory tract | 1.44e-14 | 24 |
chordate pharynx | 1.44e-14 | 24 |
pharyngeal arch system | 1.44e-14 | 24 |
pharyngeal region of foregut | 1.44e-14 | 24 |
segment of respiratory tract | 5.96e-13 | 27 |
hemopoietic organ | 4.66e-12 | 29 |
immune organ | 4.66e-12 | 29 |
lymph node | 1.12e-10 | 1 |
axillary lymph node | 1.12e-10 | 1 |
peripheral lymph node | 1.12e-10 | 1 |
shoulder | 1.12e-10 | 1 |
connective tissue | 2.39e-10 | 46 |
mixed endoderm/mesoderm-derived structure | 5.51e-10 | 35 |
hemolymphoid system | 1.01e-09 | 48 |
immune system | 1.01e-09 | 48 |
craniocervical region | 1.05e-09 | 36 |
respiratory tract | 1.63e-08 | 41 |
respiratory system | 2.62e-08 | 42 |
anterior region of body | 4.11e-08 | 43 |
hematopoietic system | 9.54e-08 | 45 |
blood island | 9.54e-08 | 45 |