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FFCP PHASE1:Mm9::chr14:9142192..9142239,-: Difference between revisions

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{{FFCP|EntrezGene=268709|HGNC=|MCL_coexpression_id=778|UniProt=Q78TU8|association_with_transcript=50bp_to_NM_183187,uc007sfa.1,uc007sfb.1_5end|description=CAGE_peak_1_at_Fam107a_5end|id=chr14:9142192..9142239,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.06e-15!50;UBERON:0006238!1.06e-15!50;UBERON:0002616!4.04e-15!49;UBERON:0000033!5.57e-15!63;UBERON:0001049!7.74e-14!52;UBERON:0005068!7.74e-14!52;UBERON:0006241!7.74e-14!52;UBERON:0007135!7.74e-14!52;UBERON:0002346!1.41e-13!71;UBERON:0003075!1.41e-13!71;UBERON:0007284!1.41e-13!71;UBERON:0004121!2.00e-13!102;UBERON:0000924!2.00e-13!102;UBERON:0006601!2.00e-13!102;UBERON:0001017!1.18e-11!73;UBERON:0005743!1.18e-11!73;UBERON:0000073!1.48e-11!75;UBERON:0001016!1.48e-11!75;UBERON:0004111!1.99e-11!122;UBERON:0000025!1.09e-10!114;UBERON:0003080!3.45e-10!40;UBERON:0002780!1.28e-09!39;UBERON:0001890!1.28e-09!39;UBERON:0006240!1.28e-09!39;UBERON:0003056!4.03e-09!49;UBERON:0002021!2.52e-07!10;UBERON:0000411!2.52e-07!10;UBERON:0001950!2.52e-07!10;UBERON:0000468!2.82e-07!333;UBERON:0002791!3.43e-07!29;UBERON:0003528!3.43e-07!29;UBERON:0001893!3.43e-07!29;UBERON:0002020!4.69e-07!34;UBERON:0002619!8.26e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.54e-15,54;UBERON:0010314,1.31e-14,92;UBERON:0000955,7.02e-14,47;UBERON:0006238,7.02e-14,47;UBERON:0001049,1.13e-13,52;UBERON:0005068,1.13e-13,52;UBERON:0006241,1.13e-13,52;UBERON:0007135,1.13e-13,52;UBERON:0002616,2.78e-13,46;UBERON:0001017,2.92e-12,73;UBERON:0001016,5.42e-12,75;UBERON:0002346,1.61e-11,64;UBERON:0003075,1.61e-11,64;UBERON:0007284,1.61e-11,64;UBERON:0004121,3.27e-11,95;UBERON:0000924,3.27e-11,95;UBERON:0006601,3.27e-11,95;UBERON:0010371,1.45e-10,73;UBERON:0004111,4.30e-10,122;UBERON:0003080,8.87e-10,40;UBERON:0000025,1.81e-09,114;UBERON:0002780,3.49e-09,39;UBERON:0001890,3.49e-09,39;UBERON:0006240,3.49e-09,39;UBERON:0003056,7.46e-09,49;UBERON:0002021,7.48e-08,10;UBERON:0000411,7.48e-08,10;UBERON:0001950,7.48e-08,10;UBERON:0002619,2.63e-07,17;UBERON:0003528,6.73e-07,29;UBERON:0002791,6.73e-07,29;UBERON:0001893,6.73e-07,29;UBERON:0002020,8.18e-07,34|phase1_expression=4.00372117761985,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.3045888058076,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,2.53442328048786,3.67093504323363,43.0315239391422,196.440665898782,319.863082061391,346.668510049447,192.201356891623,136.564936146723,0,0,0,1.02903774414379,0.286533439938757,5.67239301505187,0.202316460859598,0.528990979272033,1.26766280701236,3.04960078862219,8.89294796111139,0,0,0,24.5672090625092,47.6430698598728,0.311068836925433,0.135005938331691,0.210324961351382,4.57041575046086,1.54607978666129,0.244981598429908,0.191690942036473,0,110.115880999389,91.6795087451648,115.051293408926,0.791317726381163,0.823388792421687,1.56274011167028,72.587579740359,86.6654419448787,122.544194717002,2.06240009831567,1.56608848879013,1.1183966749518,3.40767869999328,0.453429360640713,4.92769630792852,0.860423876981386,2.719885334831,5.39703191637817,0.649776417447669,5.37632264516803,12.6399978118577,0,0,0,3.80277233397037,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,19.2970756725211,3.88406825470758,13.3597925158342,1.56136794089522,10.0473607843007,10.8389283710347,6.33035090321015,13.0523464920632,3.51866455723091,6.17987419335935,21.9791022518266,1.76922110389975,0.647067399789637,2.20841518460394,0.969750506270444,1.86391761218122,286.925181071316,291.759262591143,0.255457055208591,0,0,0,229.928631486403,300.577896051838,17.7172636479139,287.85307423841,274.126970258114,197.398642331582,213.185019671034,8.7581852911272,2.86136032403214,4.80173241023982,7.36546495602659,0.780722657776222,0,0,1.05493372485001,6.46346741937615,1.92170580427275,1.40552586839593,22.5071932542944,0.215567992932842,0.189106080167819,0,0.219195732427575,1.66828349535359,2.089512999133,3.2925141825271,0,0,0,0,0.621377317606506,1.64168241986767,1.08037236876609,1.42046841351126,0.787056926989615,2.1597395804233,2.79040733700489,2.68273401399619,10.5088808130453,1.15191894939436,1.47750717671186,6.32336714457675,5.4093995347373,2.63460138349261,14.7627060636409,280.316501435982,21.712873212029,0,3.70230793328962,1.2797295032114,0.232236671860439,0.644337306610467,0,0.444756087689741,0.951128130562796,1.89811624617805,1.64698954724011,1.25667604400135,0.795825888164603,0.58489226135736,0.898819408654221,0.864552199498777,1.99141273254367,0.758671603812327,2.51346727741403,2.25415471346161,4.07302655690629,5.04276466635827,7.71494018793504,10.4972651626267,12.8420828742254,12.55989822731,11.4759362447274,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0,2.7562988551756,0,0,0,0,0.252578877947112,0,0.964887042726734,22.7246423904924,0.37898282354097,2.28150967018836,3.22515662972857,1.64283173801951,0.837531287209079,0.952174563544055,16.7814937157707,0.78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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:268709
|HGNC=
|MCL_coexpression_id=778
|TSSclassifier=NA
|UniProt=uniprot:Q78TU8
|association_with_transcript=50bp_to_NM_183187,uc007sfa.1,uc007sfb.1_5end
|cluster_id=chr14:9142192..9142239,-
|description=CAGE_peak_1_at_Fam107a_5end
|id=chr14:9142192..9142239,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.06e-15!50;UBERON:0006238!1.06e-15!50;UBERON:0002616!4.04e-15!49;UBERON:0000033!5.57e-15!63;UBERON:0001049!7.74e-14!52;UBERON:0005068!7.74e-14!52;UBERON:0006241!7.74e-14!52;UBERON:0007135!7.74e-14!52;UBERON:0002346!1.41e-13!71;UBERON:0003075!1.41e-13!71;UBERON:0007284!1.41e-13!71;UBERON:0004121!2.00e-13!102;UBERON:0000924!2.00e-13!102;UBERON:0006601!2.00e-13!102;UBERON:0001017!1.18e-11!73;UBERON:0005743!1.18e-11!73;UBERON:0000073!1.48e-11!75;UBERON:0001016!1.48e-11!75;UBERON:0004111!1.99e-11!122;UBERON:0000025!1.09e-10!114;UBERON:0003080!3.45e-10!40;UBERON:0002780!1.28e-09!39;UBERON:0001890!1.28e-09!39;UBERON:0006240!1.28e-09!39;UBERON:0003056!4.03e-09!49;UBERON:0002021!2.52e-07!10;UBERON:0000411!2.52e-07!10;UBERON:0001950!2.52e-07!10;UBERON:0000468!2.82e-07!333;UBERON:0002791!3.43e-07!29;UBERON:0003528!3.43e-07!29;UBERON:0001893!3.43e-07!29;UBERON:0002020!4.69e-07!34;UBERON:0002619!8.26e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.54e-15,54;UBERON:0010314,1.31e-14,92;UBERON:0000955,7.02e-14,47;UBERON:0006238,7.02e-14,47;UBERON:0001049,1.13e-13,52;UBERON:0005068,1.13e-13,52;UBERON:0006241,1.13e-13,52;UBERON:0007135,1.13e-13,52;UBERON:0002616,2.78e-13,46;UBERON:0001017,2.92e-12,73;UBERON:0001016,5.42e-12,75;UBERON:0002346,1.61e-11,64;UBERON:0003075,1.61e-11,64;UBERON:0007284,1.61e-11,64;UBERON:0004121,3.27e-11,95;UBERON:0000924,3.27e-11,95;UBERON:0006601,3.27e-11,95;UBERON:0010371,1.45e-10,73;UBERON:0004111,4.30e-10,122;UBERON:0003080,8.87e-10,40;UBERON:0000025,1.81e-09,114;UBERON:0002780,3.49e-09,39;UBERON:0001890,3.49e-09,39;UBERON:0006240,3.49e-09,39;UBERON:0003056,7.46e-09,49;UBERON:0002021,7.48e-08,10;UBERON:0000411,7.48e-08,10;UBERON:0001950,7.48e-08,10;UBERON:0002619,2.63e-07,17;UBERON:0003528,6.73e-07,29;UBERON:0002791,6.73e-07,29;UBERON:0001893,6.73e-07,29;UBERON:0002020,8.18e-07,34
|phase1_expression=4.00372117761985,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.3045888058076,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,2.53442328048786,3.67093504323363,43.0315239391422,196.440665898782,319.863082061391,346.668510049447,192.201356891623,136.564936146723,0,0,0,1.02903774414379,0.286533439938757,5.67239301505187,0.202316460859598,0.528990979272033,1.26766280701236,3.04960078862219,8.89294796111139,0,0,0,24.5672090625092,47.6430698598728,0.311068836925433,0.135005938331691,0.210324961351382,4.57041575046086,1.54607978666129,0.244981598429908,0.191690942036473,0,110.115880999389,91.6795087451648,115.051293408926,0.791317726381163,0.823388792421687,1.56274011167028,72.587579740359,86.6654419448787,122.544194717002,2.06240009831567,1.56608848879013,1.1183966749518,3.40767869999328,0.453429360640713,4.92769630792852,0.860423876981386,2.719885334831,5.39703191637817,0.649776417447669,5.37632264516803,12.6399978118577,0,0,0,3.80277233397037,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,19.2970756725211,3.88406825470758,13.3597925158342,1.56136794089522,10.0473607843007,10.8389283710347,6.33035090321015,13.0523464920632,3.51866455723091,6.17987419335935,21.9791022518266,1.76922110389975,0.647067399789637,2.20841518460394,0.969750506270444,1.86391761218122,286.925181071316,291.759262591143,0.255457055208591,0,0,0,229.928631486403,300.577896051838,17.7172636479139,287.85307423841,274.126970258114,197.398642331582,213.185019671034,8.7581852911272,2.86136032403214,4.80173241023982,7.36546495602659,0.780722657776222,0,0,1.05493372485001,6.46346741937615,1.92170580427275,1.40552586839593,22.5071932542944,0.215567992932842,0.189106080167819,0,0.219195732427575,1.66828349535359,2.089512999133,3.2925141825271,0,0,0,0,0.621377317606506,1.64168241986767,1.08037236876609,1.42046841351126,0.787056926989615,2.1597395804233,2.79040733700489,2.68273401399619,10.5088808130453,1.15191894939436,1.47750717671186,6.32336714457675,5.4093995347373,2.63460138349261,14.7627060636409,280.316501435982,21.712873212029,0,3.70230793328962,1.2797295032114,0.232236671860439,0.644337306610467,0,0.444756087689741,0.951128130562796,1.89811624617805,1.64698954724011,1.25667604400135,0.795825888164603,0.58489226135736,0.898819408654221,0.864552199498777,1.99141273254367,0.758671603812327,2.51346727741403,2.25415471346161,4.07302655690629,5.04276466635827,7.71494018793504,10.4972651626267,12.8420828742254,12.55989822731,11.4759362447274,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0,2.7562988551756,0,0,0,0,0.252578877947112,0,0.964887042726734,22.7246423904924,0.37898282354097,2.28150967018836,3.22515662972857,1.64283173801951,0.837531287209079,0.952174563544055,16.7814937157707,0.788175720530955,0.664394068946325,0.797273843287435,9.99566219766002,6.21665934717224,25.0242871346015,0,0,0.983528546038072,1.37968373152366,122.17899898071,135.027862954218,0.163934945376675,7.57412781613119,0,0.390438744296638,1.72338718186239,0,0,0,0,0,0,162.909907425856,18.0263908214501,5.34196811001766,14.0082785044075,49.3260667687881,0,0.242780636154981,0.604647113929502,0.943025398779491,2.36241514304618,1.53717573971964,8.26970538138308,1.09060118843252,0,4.74055136903724,2.10837217149998,2.06271086496374,11.9153862013826,0.900305470156551,1.03486947026204,1.92903331528433,5.32020700926821,14.2695054081656,29.2897256671775,62.1108496193782,0,2.33015277950202,2.42581237860458,6.10079135883476,5.32832608096488,0.301564624640779,0.238744688006273,0.984845398470368,1.45740418314925,165.213944091364,1.53783792718067,0.412773735926445,0.370389054739423,0.376736914009382,0.136694227721025,0,0,0,0,2.86401185404534,0.949007980743406,0.203319467126849,0.540026704109006,0.627264888043406,1.52853794622324,1.48350781023303,1.81837602595739,2.09404753587224,3.88844919875379,2.4853572523477,9.58277995763124,1.49516546043979,0.496375471371293,0.583353565032143,1.80823752868824,1.18269287843545,2.93393096614385,2.604087696879,3.56521771047417,8.21386010808421,6.04863013141517,2.52808896502543,0.810900861160657,0.924398614483445,0.389762468933385,0.716106782669926,0.596044064343795,0.240390899039938,0.443068581523732,0.201932899896295,0.0762068066549998,0,0.38983152295901,0.192423683280659,1.05189211963412,2.49403421976732,0,0.0897138566094757,0,1.54551675225752,2.25218970541418,5.12824547948342,1.71494703263253,0.501572104035363,166.037041729418,190.574647913971,166.712594410864,103.4556157709,189.082775456697,191.114656039594,135.679522546593,161.214990754271,186.241530092508,170.343142566349,0.31136204275253,0.399024873401031,1.02440163452481,0.243106717068294,0.628839487883947,1.2869045591501,2.44471400581777,2.88449080134452,1.28367683836726,2.02157769411038,3.29523089857312,2.26351609663291,1.87283014939765,2.17685518176556,1.37845125493472,2.85776214769844,1.62238056322798,1.92909220463705,1.23625770240992,2.35518272215036,1.37147700954166,1.4198064492747,1.43061713968393,2.0348498328526,2.25862512996793,1.52306294205018,2.19513567447327,2.36762740294059,1.90125759384206,1.12228454331548,1.89816028998679,1.97008964751127,2.04615521584845,2.63392630016142,0.964533054905707,1.99848462350357,0.935726433781634,2.36358159453128,8.22539827896026,2.20591419119516,3.70988536992674
|short_description=p1@Fam107a
}}

Revision as of 21:44, 4 August 2015

Short description:p1@Fam107a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Fam107a_5end
Coexpression cluster:MCL_coexpression_mm9:778
Association with transcript: 50bp_to_NM_183187, uc007sfa.1, uc007sfb.1_5end
EntrezGene:268709
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Fam107a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A348.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.67
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B743.03
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2196.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8319.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3346.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C4192.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C4136.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C824.57
Mouse Microglia, donor2.CNhs12634.11736-123E847.64
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3110.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F391.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7115.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E472.59
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E586.67
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6122.54
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D93.41
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.30
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D713.36
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I110.84
adrenal gland, embryo E18.CNhs11026.1262-18F56.33
adrenal gland, neonate N00.CNhs11191.1311-23C113.05
adrenal gland, neonate N25.CNhs11223.1377-27I33.52
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H121.98
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B2286.93
cerebellum, neonate N30.CNhs11135.1395-42I2291.76
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4229.93
corpus striatum, adult.CNhs10487.19-21D8300.58
corpus striatum, neonate N00.CNhs11226.630-43F117.72
cortex, adult.CNhs10473.12-14D5287.85
cortex, neonate N30.CNhs11107.1392-42F2274.13
diencephalon, adult.CNhs10482.20-12F2197.40
diencephalon, neonate N30.CNhs11201.1388-42B2213.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.76
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G47.37
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C66.46
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A222.51
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E310.51
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G16.32
heart, neonate N20.CNhs11127.821-26I65.41
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D214.76
hippocampus, adult.CNhs10478.13-16E8280.32
hippocampus, neonate N00.CNhs11228.627-43G121.71
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C75.04
kidney, neonate N00.CNhs11214.646-21G77.71
kidney, neonate N10.CNhs11206.758-6D510.50
kidney, neonate N20.CNhs11113.832-19I112.84
kidney, neonate N25.CNhs11122.1353-25F312.56
kidney, neonate N30.CNhs11203.1385-42H111.48
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B122.72
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C616.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A410.00
lung, neonate N25.CNhs11119.1359-25C76.22
lung, neonate N30.CNhs11133.1394-42H225.02
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C2122.18
medulla oblongata, neonate N30.CNhs11200.1396-42A3135.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9162.91
ovary, adult.CNhs10507.91-2I718.03
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I414.01
oviduct, adult pregnant day01.CNhs10500.988-6G649.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F614.27
pituitary gland, embryo E17.CNhs11039.1265-44F529.29
pituitary gland, neonate N00.CNhs11190.1308-22E962.11
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C36.10
skin, neonate N00.CNhs11124.650-25G45.33
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C9165.21
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I13.89
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H38.21
testis, neonate N30.CNhs11130.1391-42E26.05
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1166.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2190.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3166.71
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7103.46
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4189.08
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5191.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6135.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7161.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8186.24
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9170.34
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C68.23
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.54e-1554
structure with developmental contribution from neural crest1.31e-1492
brain7.02e-1447
future brain7.02e-1447
neural tube1.13e-1352
neural rod1.13e-1352
future spinal cord1.13e-1352
neural keel1.13e-1352
regional part of brain2.78e-1346
central nervous system2.92e-1273
nervous system5.42e-1275
neurectoderm1.61e-1164
neural plate1.61e-1164
presumptive neural plate1.61e-1164
ectoderm-derived structure3.27e-1195
ectoderm3.27e-1195
presumptive ectoderm3.27e-1195
ecto-epithelium1.45e-1073
anatomical conduit4.30e-10122
anterior neural tube8.87e-1040
tube1.81e-09114
regional part of forebrain3.49e-0939
forebrain3.49e-0939
future forebrain3.49e-0939
pre-chordal neural plate7.46e-0949
occipital lobe7.48e-0810
visual cortex7.48e-0810
neocortex7.48e-0810
regional part of cerebral cortex2.63e-0717
brain grey matter6.73e-0729
regional part of telencephalon6.73e-0729
telencephalon6.73e-0729
gray matter8.18e-0734
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