Personal tools

FFCP PHASE1:Mm9::chr17:46683224..46683282,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=78309|HGNC=|MCL_coexpression_id=1|UniProt=E9QP09,E9QLV9,Q80TT8|association_with_transcript=54bp_to_ENSMUST00000066026,ENSMUST00000113441,NM_001081335,uc008cta.1_5end|description=CAGE_peak_1_at_Cul9_5end|id=chr17:46683224..46683282,-|ontology_enrichment_celltype=CL:0000221!7.88e-11!44;CL:0000133!7.88e-11!44;CL:0002319!1.52e-10!43;CL:0000055!4.25e-10!50;CL:0000117!2.19e-09!23;CL:0000337!2.19e-09!23;CL:0000540!3.16e-09!33;CL:0000047!3.16e-09!33;CL:0000031!3.16e-09!33;CL:0000404!3.16e-09!33;CL:0000393!4.88e-09!39;CL:0000211!4.88e-09!39|ontology_enrichment_celltype_v019_2=CL:0000221,7.58e-11,44;CL:0000133,7.58e-11,44;CL:0002319,1.46e-10,43;CL:0000117,2.12e-09,23;CL:0000337,2.12e-09,23;CL:0000540,3.06e-09,33;CL:0000047,3.06e-09,33;CL:0000031,3.06e-09,33;CL:0000404,3.06e-09,33;CL:0000393,4.73e-09,39;CL:0000211,4.73e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.83e-29!73;UBERON:0005743!4.83e-29!73;UBERON:0000073!1.36e-27!75;UBERON:0001016!1.36e-27!75;UBERON:0004121!5.12e-27!102;UBERON:0000924!5.12e-27!102;UBERON:0006601!5.12e-27!102;UBERON:0000033!1.27e-25!63;UBERON:0001049!4.26e-24!52;UBERON:0005068!4.26e-24!52;UBERON:0006241!4.26e-24!52;UBERON:0007135!4.26e-24!52;UBERON:0002346!7.27e-24!71;UBERON:0003075!7.27e-24!71;UBERON:0007284!7.27e-24!71;UBERON:0000955!9.05e-23!50;UBERON:0006238!9.05e-23!50;UBERON:0002616!4.44e-22!49;UBERON:0003056!8.86e-19!49;UBERON:0003080!5.06e-17!40;UBERON:0002780!2.34e-16!39;UBERON:0001890!2.34e-16!39;UBERON:0006240!2.34e-16!39;UBERON:0002020!3.81e-15!34;UBERON:0004111!1.52e-13!122;UBERON:0002791!2.26e-12!29;UBERON:0003528!2.26e-12!29;UBERON:0001893!2.26e-12!29;UBERON:0000025!5.86e-12!114;UBERON:0007811!3.15e-11!86;UBERON:0000153!3.07e-10!94;UBERON:0000956!3.39e-08!21;UBERON:0001869!3.39e-08!21;UBERON:0000203!3.39e-08!21;UBERON:0002619!4.39e-08!17;UBERON:0003076!9.59e-08!12;UBERON:0003057!9.59e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.30e-29,73;UBERON:0004121,5.83e-28,95;UBERON:0000924,5.83e-28,95;UBERON:0006601,5.83e-28,95;UBERON:0001016,1.22e-27,75;UBERON:0002346,1.93e-25,64;UBERON:0003075,1.93e-25,64;UBERON:0007284,1.93e-25,64;UBERON:0000073,3.35e-25,54;UBERON:0001049,3.87e-24,52;UBERON:0005068,3.87e-24,52;UBERON:0006241,3.87e-24,52;UBERON:0007135,3.87e-24,52;UBERON:0010314,6.60e-24,92;UBERON:0010371,1.10e-23,73;UBERON:0000955,3.98e-21,47;UBERON:0006238,3.98e-21,47;UBERON:0002616,1.91e-20,46;UBERON:0003056,8.24e-19,49;UBERON:0003080,4.74e-17,40;UBERON:0002780,2.20e-16,39;UBERON:0001890,2.20e-16,39;UBERON:0006240,2.20e-16,39;UBERON:0002020,3.60e-15,34;UBERON:0004111,1.89e-13,122;UBERON:0003528,2.16e-12,29;UBERON:0002791,2.16e-12,29;UBERON:0001893,2.16e-12,29;UBERON:0000025,7.25e-12,114;UBERON:0000956,3.30e-08,21;UBERON:0001869,3.30e-08,21;UBERON:0000203,3.30e-08,21;UBERON:0002619,4.27e-08,17;UBERON:0003076,9.34e-08,12;UBERON:0003057,9.34e-08,12|phase1_expression=10.5698239089164,0,0.454999239389536,0.30246421130683,0,2.35030980676646,1.16806320297763,3.22808308603941,0.563154888606667,0.70219357896598,0.171217968225505,0.478632953972018,1.71200729931206,2.53519167015092,1.33243904726265,1.21485160433896,0,3.62781490161973,2.33094537129756,2.12194825899015,10.2051948181284,0,0,1.43993180514066,1.14704640533585,0.57423196411502,0.86152399231815,0.430942465371778,0.190023419456374,1.00812051903972,0,0,0,0,2.3108129580102,1.16364251750945,2.45003227514843,0.418531630736908,0,0,0,0.683045484958446,0.485510353031154,4.65818226509636,6.08261587317087,4.77221555620372,7.04152209913235,8.93903141159831,10.7646229539891,12.4435135407541,5.03951117851305,5.75010257459886,2.01339127269284,2.90144856804538,3.36093799142464,3.08711323243136,6.30373567865265,3.6097046459421,12.9482534950143,15.869729378161,7.60597684207415,4.06613438482959,1.77858959222228,9.44894703145469,4.94433181283487,11.3676818391376,6.5912024314049,14.6002956022191,4.87341177849845,4.59020190327748,3.78584930432488,13.9968982357864,13.2521124570968,5.26710436624302,4.98396449294829,6.43453150627015,7.70811166995721,14.939418555967,18.279177457493,11.2103344570665,15.3699241252048,14.0646610050325,13.959149950069,9.00420176050688,18.7941844765476,17.3830865429464,14.5219114415085,13.047961207771,1.36307147999731,2.87171928405785,5.50742528533188,2.58127163094416,0.679971333707751,3.77792234146472,0.649776417447669,2.24013443548668,3.93244376368905,0.852151612890289,0.519572009205738,0.70667914902068,7.32385782838739,0,0,0,1.08245520505607,0.506719730950197,1.51657333504435,3.19714863213368,4.66088190564909,12.7660239595749,1.90833859442749,2.74018930480927,1.84492397804847,3.16517545160507,5.40908052824242,7.03732911446183,2.47194967734374,6.2177723475562,2.65383165584962,7.44127509758082,4.85851340612866,2.42437626567611,3.72783522436244,19.6163133997737,22.6202443358531,1.78819938646014,3.71426885968353,5.99902730993408,3.81210681219194,17.9748767285787,20.1300265240196,13.6963243803022,15.8180131374972,21.7358138730781,17.0386196538839,22.8760180925538,2.85150218780886,5.59831367745419,6.57079171927554,5.6819301089348,4.29397461776922,4.36813998423599,4.14142898552303,6.17889753126432,12.1785333480877,10.6334387836425,10.9631017734883,10.6068382002996,0.646703978798527,3.59301552318857,3.69497360744293,4.16471891612392,5.28289773528636,2.43776516565517,2.67516777330327,2.18937693500343,1.40442637462647,2.31613116403244,2.27330799516474,2.27838349789052,2.34526059981096,2.16074473753218,2.60419209143731,3.34499193970586,3.5481435964097,2.79040733700489,6.17028823219124,5.13767506415546,6.41783414662574,6.40253109908471,9.1607754786817,8.18719929581861,7.02560368931362,11.0049263383505,16.6129059365661,12.3485534855141,1.32167513193519,0.793351699990633,1.06644125267617,1.16118335930219,1.28867461322093,1.00841762311671,0.889512175379481,2.47293313946327,1.89811624617805,2.30578536613615,2.01068167040216,3.78017296878187,2.9244613067868,0.898819408654221,2.16138049874694,1.1948476395262,1.32767530667157,2.39921876480431,3.38123207019241,3.86937522906097,4.07300223052014,6.31222379012867,7.58838445491087,9.15182917473533,6.59394656933774,9.87177311374404,3.26097889795864,0.166845105716094,0,0.224862112384854,0.608580364165509,1.68824011826692,1.2731292589071,1.15078454980324,1.78348749452539,0.823684239564244,7.18841032636773,3.72140947668503,3.12037673114561,4.04126204715379,2.87035861635059,5.30687873499704,4.43407656399851,1.89491411770485,1.79261474086228,1.18821560042632,1.40814148973101,2.68010011906905,1.90434912708811,3.70753930929818,3.94087860265477,5.53661724121937,6.05928120898451,3.27726629431476,6.21665934717224,6.79850575333104,4.52373851817817,3.26343410291226,1.47529281905711,4.13905119457099,17.1789131286937,16.9956945558695,0,7.57412781613119,3.15508219416257,4.29482618726302,4.73931475012158,3.34556317133573,4.01037613348309,5.09537755419898,5.66734982344852,4.9683495844923,7.90575555893047,17.3513510867776,8.23252494207958,5.69809931735217,6.51547837414304,8.24850614862677,2.65490276679926,2.42780636154981,0.302323556964751,2.26326095707078,4.72483028609236,3.3817866273832,4.9101375701962,3.63533729477506,8.19943970284859,3.79244109522979,5.27093042874994,7.21948802737308,16.6815406819356,3.78128297465751,6.59729287292048,7.07312215604255,8.33499098118686,10.7021290561242,10.5311373185357,19.4857567433344,1.87737366450968,1.48282449604674,5.95426674748397,7.09010887648364,3.71368181400583,3.07595917133595,2.98430860007841,2.1338316966858,2.33184669303881,15.9465759729038,2.56306321196779,1.23832120777933,1.11116716421827,1.50694765603753,1.23024804948923,2.28778173206523,7.30907248973578,7.97723278244851,7.18639863783004,1.90934123603023,2.84702394223022,3.65975040828328,1.08005340821801,1.46361807210128,1.09181281873089,2.42755823492677,3.88471241909079,3.92633912976044,3.11075935900303,5.59205381778233,9.01908701894705,2.24274819065968,1.82004339502807,1.75006069509643,2.0665571756437,3.21016638432478,4.10750335260139,4.9477666240701,5.97698263226552,7.73069186643219,14.4015003128933,2.21207784439725,3.04087822935246,1.64337531463724,1.68897069871134,1.25318686967237,2.58285761215644,1.56254084375959,1.62458479892035,2.42319479875554,2.59103142626999,2.21817607301049,1.36441033035653,2.40529604100824,4.20756847853648,5.21479882314986,0,0,0,9.65947970160952,4.50437941082837,7.50921659495787,4.07299920250225,4.01257683228291,12.9892923801925,10.5874804396651,6.87474616127276,8.248952752497,14.3867329151835,17.3740596399631,14.1754725048679,10.8077088773813,16.3131267234314,19.1571315348173,0.93408612825759,5.1873233542134,7.68301225893604,4.132814190161,2.30574478890781,3.30918315210025,3.55594764482584,3.91466608753899,4.1719497246936,2.27427490587418,4.30914809813408,4.33840585187975,3.65201879132541,4.09760975391163,4.70970845436029,6.66811167796303,6.02598494913249,3.47236596834669,6.1812885120496,3.09117732282234,3.08582327146874,4.2594193478241,3.81497903915713,3.34296758254356,3.67026583619789,4.48457421825885,4.39027134894654,3.94604567156764,3.93831930152999,2.80571135828869,4.27086065247027,4.82671963640261,4.50154147486658,3.09873682371932,4.24394544158511,8.24374907195222,6.08222181958062,5.80151845930405,6.50380329034067,3.75005412503176,3.94175320554716|short_description=p1@Cul9}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:78309
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:E9QP09,uniprot:E9QLV9,uniprot:Q80TT8
|association_with_transcript=54bp_to_ENSMUST00000066026,ENSMUST00000113441,NM_001081335,uc008cta.1_5end
|cluster_id=chr17:46683224..46683282,-
|description=CAGE_peak_1_at_Cul9_5end
|id=chr17:46683224..46683282,-
|ontology_enrichment_celltype=CL:0000221!7.88e-11!44;CL:0000133!7.88e-11!44;CL:0002319!1.52e-10!43;CL:0000055!4.25e-10!50;CL:0000117!2.19e-09!23;CL:0000337!2.19e-09!23;CL:0000540!3.16e-09!33;CL:0000047!3.16e-09!33;CL:0000031!3.16e-09!33;CL:0000404!3.16e-09!33;CL:0000393!4.88e-09!39;CL:0000211!4.88e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000221,7.58e-11,44;CL:0000133,7.58e-11,44;CL:0002319,1.46e-10,43;CL:0000117,2.12e-09,23;CL:0000337,2.12e-09,23;CL:0000540,3.06e-09,33;CL:0000047,3.06e-09,33;CL:0000031,3.06e-09,33;CL:0000404,3.06e-09,33;CL:0000393,4.73e-09,39;CL:0000211,4.73e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.83e-29!73;UBERON:0005743!4.83e-29!73;UBERON:0000073!1.36e-27!75;UBERON:0001016!1.36e-27!75;UBERON:0004121!5.12e-27!102;UBERON:0000924!5.12e-27!102;UBERON:0006601!5.12e-27!102;UBERON:0000033!1.27e-25!63;UBERON:0001049!4.26e-24!52;UBERON:0005068!4.26e-24!52;UBERON:0006241!4.26e-24!52;UBERON:0007135!4.26e-24!52;UBERON:0002346!7.27e-24!71;UBERON:0003075!7.27e-24!71;UBERON:0007284!7.27e-24!71;UBERON:0000955!9.05e-23!50;UBERON:0006238!9.05e-23!50;UBERON:0002616!4.44e-22!49;UBERON:0003056!8.86e-19!49;UBERON:0003080!5.06e-17!40;UBERON:0002780!2.34e-16!39;UBERON:0001890!2.34e-16!39;UBERON:0006240!2.34e-16!39;UBERON:0002020!3.81e-15!34;UBERON:0004111!1.52e-13!122;UBERON:0002791!2.26e-12!29;UBERON:0003528!2.26e-12!29;UBERON:0001893!2.26e-12!29;UBERON:0000025!5.86e-12!114;UBERON:0007811!3.15e-11!86;UBERON:0000153!3.07e-10!94;UBERON:0000956!3.39e-08!21;UBERON:0001869!3.39e-08!21;UBERON:0000203!3.39e-08!21;UBERON:0002619!4.39e-08!17;UBERON:0003076!9.59e-08!12;UBERON:0003057!9.59e-08!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.30e-29,73;UBERON:0004121,5.83e-28,95;UBERON:0000924,5.83e-28,95;UBERON:0006601,5.83e-28,95;UBERON:0001016,1.22e-27,75;UBERON:0002346,1.93e-25,64;UBERON:0003075,1.93e-25,64;UBERON:0007284,1.93e-25,64;UBERON:0000073,3.35e-25,54;UBERON:0001049,3.87e-24,52;UBERON:0005068,3.87e-24,52;UBERON:0006241,3.87e-24,52;UBERON:0007135,3.87e-24,52;UBERON:0010314,6.60e-24,92;UBERON:0010371,1.10e-23,73;UBERON:0000955,3.98e-21,47;UBERON:0006238,3.98e-21,47;UBERON:0002616,1.91e-20,46;UBERON:0003056,8.24e-19,49;UBERON:0003080,4.74e-17,40;UBERON:0002780,2.20e-16,39;UBERON:0001890,2.20e-16,39;UBERON:0006240,2.20e-16,39;UBERON:0002020,3.60e-15,34;UBERON:0004111,1.89e-13,122;UBERON:0003528,2.16e-12,29;UBERON:0002791,2.16e-12,29;UBERON:0001893,2.16e-12,29;UBERON:0000025,7.25e-12,114;UBERON:0000956,3.30e-08,21;UBERON:0001869,3.30e-08,21;UBERON:0000203,3.30e-08,21;UBERON:0002619,4.27e-08,17;UBERON:0003076,9.34e-08,12;UBERON:0003057,9.34e-08,12
|phase1_expression=10.5698239089164,0,0.454999239389536,0.30246421130683,0,2.35030980676646,1.16806320297763,3.22808308603941,0.563154888606667,0.70219357896598,0.171217968225505,0.478632953972018,1.71200729931206,2.53519167015092,1.33243904726265,1.21485160433896,0,3.62781490161973,2.33094537129756,2.12194825899015,10.2051948181284,0,0,1.43993180514066,1.14704640533585,0.57423196411502,0.86152399231815,0.430942465371778,0.190023419456374,1.00812051903972,0,0,0,0,2.3108129580102,1.16364251750945,2.45003227514843,0.418531630736908,0,0,0,0.683045484958446,0.485510353031154,4.65818226509636,6.08261587317087,4.77221555620372,7.04152209913235,8.93903141159831,10.7646229539891,12.4435135407541,5.03951117851305,5.75010257459886,2.01339127269284,2.90144856804538,3.36093799142464,3.08711323243136,6.30373567865265,3.6097046459421,12.9482534950143,15.869729378161,7.60597684207415,4.06613438482959,1.77858959222228,9.44894703145469,4.94433181283487,11.3676818391376,6.5912024314049,14.6002956022191,4.87341177849845,4.59020190327748,3.78584930432488,13.9968982357864,13.2521124570968,5.26710436624302,4.98396449294829,6.43453150627015,7.70811166995721,14.939418555967,18.279177457493,11.2103344570665,15.3699241252048,14.0646610050325,13.959149950069,9.00420176050688,18.7941844765476,17.3830865429464,14.5219114415085,13.047961207771,1.36307147999731,2.87171928405785,5.50742528533188,2.58127163094416,0.679971333707751,3.77792234146472,0.649776417447669,2.24013443548668,3.93244376368905,0.852151612890289,0.519572009205738,0.70667914902068,7.32385782838739,0,0,0,1.08245520505607,0.506719730950197,1.51657333504435,3.19714863213368,4.66088190564909,12.7660239595749,1.90833859442749,2.74018930480927,1.84492397804847,3.16517545160507,5.40908052824242,7.03732911446183,2.47194967734374,6.2177723475562,2.65383165584962,7.44127509758082,4.85851340612866,2.42437626567611,3.72783522436244,19.6163133997737,22.6202443358531,1.78819938646014,3.71426885968353,5.99902730993408,3.81210681219194,17.9748767285787,20.1300265240196,13.6963243803022,15.8180131374972,21.7358138730781,17.0386196538839,22.8760180925538,2.85150218780886,5.59831367745419,6.57079171927554,5.6819301089348,4.29397461776922,4.36813998423599,4.14142898552303,6.17889753126432,12.1785333480877,10.6334387836425,10.9631017734883,10.6068382002996,0.646703978798527,3.59301552318857,3.69497360744293,4.16471891612392,5.28289773528636,2.43776516565517,2.67516777330327,2.18937693500343,1.40442637462647,2.31613116403244,2.27330799516474,2.27838349789052,2.34526059981096,2.16074473753218,2.60419209143731,3.34499193970586,3.5481435964097,2.79040733700489,6.17028823219124,5.13767506415546,6.41783414662574,6.40253109908471,9.1607754786817,8.18719929581861,7.02560368931362,11.0049263383505,16.6129059365661,12.3485534855141,1.32167513193519,0.793351699990633,1.06644125267617,1.16118335930219,1.28867461322093,1.00841762311671,0.889512175379481,2.47293313946327,1.89811624617805,2.30578536613615,2.01068167040216,3.78017296878187,2.9244613067868,0.898819408654221,2.16138049874694,1.1948476395262,1.32767530667157,2.39921876480431,3.38123207019241,3.86937522906097,4.07300223052014,6.31222379012867,7.58838445491087,9.15182917473533,6.59394656933774,9.87177311374404,3.26097889795864,0.166845105716094,0,0.224862112384854,0.608580364165509,1.68824011826692,1.2731292589071,1.15078454980324,1.78348749452539,0.823684239564244,7.18841032636773,3.72140947668503,3.12037673114561,4.04126204715379,2.87035861635059,5.30687873499704,4.43407656399851,1.89491411770485,1.79261474086228,1.18821560042632,1.40814148973101,2.68010011906905,1.90434912708811,3.70753930929818,3.94087860265477,5.53661724121937,6.05928120898451,3.27726629431476,6.21665934717224,6.79850575333104,4.52373851817817,3.26343410291226,1.47529281905711,4.13905119457099,17.1789131286937,16.9956945558695,0,7.57412781613119,3.15508219416257,4.29482618726302,4.73931475012158,3.34556317133573,4.01037613348309,5.09537755419898,5.66734982344852,4.9683495844923,7.90575555893047,17.3513510867776,8.23252494207958,5.69809931735217,6.51547837414304,8.24850614862677,2.65490276679926,2.42780636154981,0.302323556964751,2.26326095707078,4.72483028609236,3.3817866273832,4.9101375701962,3.63533729477506,8.19943970284859,3.79244109522979,5.27093042874994,7.21948802737308,16.6815406819356,3.78128297465751,6.59729287292048,7.07312215604255,8.33499098118686,10.7021290561242,10.5311373185357,19.4857567433344,1.87737366450968,1.48282449604674,5.95426674748397,7.09010887648364,3.71368181400583,3.07595917133595,2.98430860007841,2.1338316966858,2.33184669303881,15.9465759729038,2.56306321196779,1.23832120777933,1.11116716421827,1.50694765603753,1.23024804948923,2.28778173206523,7.30907248973578,7.97723278244851,7.18639863783004,1.90934123603023,2.84702394223022,3.65975040828328,1.08005340821801,1.46361807210128,1.09181281873089,2.42755823492677,3.88471241909079,3.92633912976044,3.11075935900303,5.59205381778233,9.01908701894705,2.24274819065968,1.82004339502807,1.75006069509643,2.0665571756437,3.21016638432478,4.10750335260139,4.9477666240701,5.97698263226552,7.73069186643219,14.4015003128933,2.21207784439725,3.04087822935246,1.64337531463724,1.68897069871134,1.25318686967237,2.58285761215644,1.56254084375959,1.62458479892035,2.42319479875554,2.59103142626999,2.21817607301049,1.36441033035653,2.40529604100824,4.20756847853648,5.21479882314986,0,0,0,9.65947970160952,4.50437941082837,7.50921659495787,4.07299920250225,4.01257683228291,12.9892923801925,10.5874804396651,6.87474616127276,8.248952752497,14.3867329151835,17.3740596399631,14.1754725048679,10.8077088773813,16.3131267234314,19.1571315348173,0.93408612825759,5.1873233542134,7.68301225893604,4.132814190161,2.30574478890781,3.30918315210025,3.55594764482584,3.91466608753899,4.1719497246936,2.27427490587418,4.30914809813408,4.33840585187975,3.65201879132541,4.09760975391163,4.70970845436029,6.66811167796303,6.02598494913249,3.47236596834669,6.1812885120496,3.09117732282234,3.08582327146874,4.2594193478241,3.81497903915713,3.34296758254356,3.67026583619789,4.48457421825885,4.39027134894654,3.94604567156764,3.93831930152999,2.80571135828869,4.27086065247027,4.82671963640261,4.50154147486658,3.09873682371932,4.24394544158511,8.24374907195222,6.08222181958062,5.80151845930405,6.50380329034067,3.75005412503176,3.94175320554716
|short_description=p1@Cul9
}}

Revision as of 23:36, 4 August 2015

Short description:p1@Cul9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cul9_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 54bp_to_ENSMUST00000066026, ENSMUST00000113441, NM_001081335, uc008cta.1_5end
EntrezGene:78309
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p1@Cul9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.08
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.94
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C312.95
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.25
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.98
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.21
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.05
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F92.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.32
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.20
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D712.77
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C15.41
adrenal gland, neonate N25.CNhs11223.1377-27I37.04
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H16.22
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B219.62
cerebellum, neonate N30.CNhs11135.1395-42I222.62
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A417.97
corpus striatum, adult.CNhs10487.19-21D820.13
corpus striatum, neonate N00.CNhs11226.630-43F113.70
cortex, adult.CNhs10473.12-14D515.82
cortex, neonate N30.CNhs11107.1392-42F221.74
diencephalon, adult.CNhs10482.20-12F217.04
diencephalon, neonate N30.CNhs11201.1388-42B222.88
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.60
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C64.29
eyeball, embryo E14.CNhs10521.399-16E24.37
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D46.18
eyeball, neonate N00.CNhs11207.633-15C612.18
eyeball, neonate N01.CNhs11140.1532-43E710.63
eyeball, neonate N02.CNhs11205.1551-44G810.96
eyeball, neonate N16.CNhs11188.777-19A210.61
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E35.14
heart, neonate N03.CNhs11221.1349-25I26.42
heart, neonate N10.CNhs11118.749-24G16.40
heart, neonate N16.CNhs11209.782-15G19.16
heart, neonate N20.CNhs11127.821-26I68.19
heart, neonate N25.CNhs11196.1351-25D37.03
heart, neonate N30.CNhs11202.1390-42D211.00
hippocampus, adult.CNhs10478.13-16E816.61
hippocampus, neonate N00.CNhs11228.627-43G112.35
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G76.31
kidney, neonate N10.CNhs11206.758-6D57.59
kidney, neonate N20.CNhs11113.832-19I19.15
kidney, neonate N25.CNhs11122.1353-25F36.59
kidney, neonate N30.CNhs11203.1385-42H19.87
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A35.54
lung, neonate N10.CNhs11219.750-23E66.06
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C76.22
lung, neonate N30.CNhs11133.1394-42H26.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C217.18
medulla oblongata, neonate N30.CNhs11200.1396-42A317.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I78.23
ovary, embryo E18.CNhs11040.505-44H75.70
ovary, neonate N00.CNhs11217.1299-22I46.52
oviduct, adult pregnant day01.CNhs10500.988-6G68.25
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G816.68
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C76.60
pituitary gland, embryo E14.CNhs11037.398-44A57.07
pituitary gland, embryo E15.CNhs10592.427-16B98.33
pituitary gland, embryo E16.CNhs11036.449-43F610.70
pituitary gland, embryo E17.CNhs11039.1265-44F510.53
pituitary gland, neonate N00.CNhs11190.1308-22E919.49
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C37.09
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H33.08
skin, neonate N06.CNhs11097.693-20I52.98
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.19
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I44.95
testis, neonate N10.CNhs11204.763-44D95.98
testis, neonate N20.CNhs11110.839-18H37.73
testis, neonate N30.CNhs11130.1391-42E214.40
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G72.41
thymus, neonate N30.CNhs11132.1393-42G24.21
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E49.66
uterus, adult pregnant day19.CNhs10497.590-15F54.50
uterus, adult.CNhs10509.92-27E57.51
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H27.68
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C66.50
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Cell type
Ontology termp-valuen
ectodermal cell7.58e-1144
neurectodermal cell7.58e-1144
neural cell1.46e-1043
CNS neuron (sensu Vertebrata)2.12e-0923
neuroblast (sensu Vertebrata)2.12e-0923
neuron3.06e-0933
neuronal stem cell3.06e-0933
neuroblast3.06e-0933
electrically signaling cell3.06e-0933
electrically responsive cell4.73e-0939
electrically active cell4.73e-0939

Uber anatomy
Ontology termp-valuen
central nervous system4.30e-2973
ectoderm-derived structure5.83e-2895
ectoderm5.83e-2895
presumptive ectoderm5.83e-2895
nervous system1.22e-2775
neurectoderm1.93e-2564
neural plate1.93e-2564
presumptive neural plate1.93e-2564
regional part of nervous system3.35e-2554
neural tube3.87e-2452
neural rod3.87e-2452
future spinal cord3.87e-2452
neural keel3.87e-2452
structure with developmental contribution from neural crest6.60e-2492
ecto-epithelium1.10e-2373
brain3.98e-2147
future brain3.98e-2147
regional part of brain1.91e-2046
pre-chordal neural plate8.24e-1949
anterior neural tube4.74e-1740
regional part of forebrain2.20e-1639
forebrain2.20e-1639
future forebrain2.20e-1639
gray matter3.60e-1534
anatomical conduit1.89e-13122
brain grey matter2.16e-1229
regional part of telencephalon2.16e-1229
telencephalon2.16e-1229
tube7.25e-12114
cerebral cortex3.30e-0821
cerebral hemisphere3.30e-0821
pallium3.30e-0821
regional part of cerebral cortex4.27e-0817
posterior neural tube9.34e-0812
chordal neural plate9.34e-0812