FFCP PHASE1:Mm9::chr2:31101321..31101420,+: Difference between revisions
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{{FFCP|EntrezGene=14299|HGNC=|MCL_coexpression_id=1|UniProt=Q8BNY6|association_with_transcript=0bp_to_ENSMUST00000000199_5end|description=CAGE_peak_1_at_Ncs1_5end|id=chr2:31101321..31101420,+|ontology_enrichment_celltype=CL:0000117!1.14e-13!23;CL:0000337!1.14e-13!23;CL:0002319!4.58e-13!43;CL:0000221!1.06e-12!44;CL:0000133!1.06e-12!44;CL:0000055!2.51e-12!50;CL:0000393!3.31e-10!39;CL:0000211!3.31e-10!39;CL:0000540!3.66e-10!33;CL:0000047!3.66e-10!33;CL:0000031!3.66e-10!33;CL:0000404!3.66e-10!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-13,23;CL:0000337,1.08e-13,23;CL:0002319,4.36e-13,43;CL:0000221,1.02e-12,44;CL:0000133,1.02e-12,44;CL:0000393,3.19e-10,39;CL:0000211,3.19e-10,39;CL:0000540,3.53e-10,33;CL:0000047,3.53e-10,33;CL:0000031,3.53e-10,33;CL:0000404,3.53e-10,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.05e-27!75;UBERON:0001016!1.05e-27!75;UBERON:0001017!2.64e-27!73;UBERON:0005743!2.64e-27!73;UBERON:0001049!2.23e-24!52;UBERON:0005068!2.23e-24!52;UBERON:0006241!2.23e-24!52;UBERON:0007135!2.23e-24!52;UBERON:0004121!5.13e-24!102;UBERON:0000924!5.13e-24!102;UBERON:0006601!5.13e-24!102;UBERON:0000955!1.23e-23!50;UBERON:0006238!1.23e-23!50;UBERON:0002616!5.42e-23!49;UBERON:0000033!5.52e-22!63;UBERON:0002346!1.77e-21!71;UBERON:0003075!1.77e-21!71;UBERON:0007284!1.77e-21!71;UBERON:0002020!1.10e-19!34;UBERON:0003056!4.10e-18!49;UBERON:0003080!9.42e-18!40;UBERON:0002780!4.11e-17!39;UBERON:0001890!4.11e-17!39;UBERON:0006240!4.11e-17!39;UBERON:0002791!5.59e-17!29;UBERON:0003528!5.59e-17!29;UBERON:0001893!5.59e-17!29;UBERON:0000153!3.24e-14!94;UBERON:0007811!4.07e-13!86;UBERON:0000956!2.33e-12!21;UBERON:0001869!2.33e-12!21;UBERON:0000203!2.33e-12!21;UBERON:0002619!2.20e-10!17;UBERON:0003076!3.09e-07!12;UBERON:0003057!3.09e-07!12;UBERON:0002021!4.80e-07!10;UBERON:0000411!4.80e-07!10;UBERON:0001950!4.80e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.39e-28,75;UBERON:0001017,2.37e-27,73;UBERON:0000073,5.73e-26,54;UBERON:0004121,8.34e-26,95;UBERON:0000924,8.34e-26,95;UBERON:0006601,8.34e-26,95;UBERON:0001049,2.02e-24,52;UBERON:0005068,2.02e-24,52;UBERON:0006241,2.02e-24,52;UBERON:0007135,2.02e-24,52;UBERON:0002346,5.97e-24,64;UBERON:0003075,5.97e-24,64;UBERON:0007284,5.97e-24,64;UBERON:0010371,4.30e-22,73;UBERON:0000955,1.98e-21,47;UBERON:0006238,1.98e-21,47;UBERON:0010314,5.23e-21,92;UBERON:0002616,8.49e-21,46;UBERON:0002020,1.02e-19,34;UBERON:0003056,3.82e-18,49;UBERON:0003080,8.79e-18,40;UBERON:0002780,3.85e-17,39;UBERON:0001890,3.85e-17,39;UBERON:0006240,3.85e-17,39;UBERON:0003528,5.23e-17,29;UBERON:0002791,5.23e-17,29;UBERON:0001893,5.23e-17,29;UBERON:0000956,2.23e-12,21;UBERON:0001869,2.23e-12,21;UBERON:0000203,2.23e-12,21;UBERON:0002619,2.12e-10,17;UBERON:0003076,3.02e-07,12;UBERON:0003057,3.02e-07,12;UBERON:0002021,4.69e-07,10;UBERON:0000411,4.69e-07,10;UBERON:0001950,4.69e-07,10|phase1_expression=12.0111635328595,0,0,0,0,2.68606835059024,2.33612640595526,2.06597317506522,15.627548158835,13.1076134740316,40.7498764376702,35.339066434934,0.342401459862411,0.262261207256992,0,0.404950534779652,0,0.315462165358238,0.137114433605739,0.42438965179803,34.18740264073,5.75887516965135,7.05239430675126,0.799962113967033,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,10.1604907753541,8.61090702618398,15.8481681015439,0.288851619751275,0.664938581433969,0.204169356262369,0.837063261473815,0,0,0,0,0,23.6686017794085,26.6621329107323,25.6965453026354,37.5547845287059,37.7183520538172,50.9671943943975,43.1634375944909,21.6978953519312,41.6882436658418,0.671130424230945,0.725362142011344,1.00828139742739,28.2985379639542,14.0401385569991,10.8291139378263,114.713433307392,147.059492237625,141.978234385384,45.0663227651946,40.0182658250013,8.09909745553259,5.93319817540185,8.5257613793532,32.0572118254693,43.0324501960141,60.8658024250764,74.6582838974249,70.458862052713,126.543386090885,108.225585066291,73.4944795289724,74.8553128652426,129.609848912013,178.38772721901,186.551200942459,191.240133904023,120.148408122207,116.006332087855,87.5134462535357,151.59636845775,138.439602067793,131.100896592503,117.26217701852,99.6601765593721,118.550047544891,35.2126798999306,21.0844652697932,3.76823835312181,0.860423876981386,0,0,0.649776417447669,0,9.83110940922263,25.5645483867087,20.2633083590238,25.7937889392548,9.15482228548423,11.5493829672886,20.3844191765317,7.11066703153331,9.09262372247099,10.1343946190039,12.6381111253696,3.88225191044804,1.03575153458869,7.42210695324124,21.1652098654686,14.6143429589828,13.8369298353635,11.7563659631046,10.1126288136706,2.76466500925286,2.96633961281249,7.37456720291549,3.5384422077995,20.7061567932684,4.19598885074748,4.84875253135222,3.72783522436244,62.9478713574826,58.2261844941405,1.27728527604296,8.74650408893218,5.99902730993408,4.95573885584952,146.495245337917,168.360221837255,126.408278225542,173.476671551892,140.132070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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14299 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BNY6 | |||
|association_with_transcript=0bp_to_ENSMUST00000000199_5end | |||
|cluster_id=chr2:31101321..31101420,+ | |||
|description=CAGE_peak_1_at_Ncs1_5end | |||
|id=chr2:31101321..31101420,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.14e-13!23;CL:0000337!1.14e-13!23;CL:0002319!4.58e-13!43;CL:0000221!1.06e-12!44;CL:0000133!1.06e-12!44;CL:0000055!2.51e-12!50;CL:0000393!3.31e-10!39;CL:0000211!3.31e-10!39;CL:0000540!3.66e-10!33;CL:0000047!3.66e-10!33;CL:0000031!3.66e-10!33;CL:0000404!3.66e-10!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-13,23;CL:0000337,1.08e-13,23;CL:0002319,4.36e-13,43;CL:0000221,1.02e-12,44;CL:0000133,1.02e-12,44;CL:0000393,3.19e-10,39;CL:0000211,3.19e-10,39;CL:0000540,3.53e-10,33;CL:0000047,3.53e-10,33;CL:0000031,3.53e-10,33;CL:0000404,3.53e-10,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.05e-27!75;UBERON:0001016!1.05e-27!75;UBERON:0001017!2.64e-27!73;UBERON:0005743!2.64e-27!73;UBERON:0001049!2.23e-24!52;UBERON:0005068!2.23e-24!52;UBERON:0006241!2.23e-24!52;UBERON:0007135!2.23e-24!52;UBERON:0004121!5.13e-24!102;UBERON:0000924!5.13e-24!102;UBERON:0006601!5.13e-24!102;UBERON:0000955!1.23e-23!50;UBERON:0006238!1.23e-23!50;UBERON:0002616!5.42e-23!49;UBERON:0000033!5.52e-22!63;UBERON:0002346!1.77e-21!71;UBERON:0003075!1.77e-21!71;UBERON:0007284!1.77e-21!71;UBERON:0002020!1.10e-19!34;UBERON:0003056!4.10e-18!49;UBERON:0003080!9.42e-18!40;UBERON:0002780!4.11e-17!39;UBERON:0001890!4.11e-17!39;UBERON:0006240!4.11e-17!39;UBERON:0002791!5.59e-17!29;UBERON:0003528!5.59e-17!29;UBERON:0001893!5.59e-17!29;UBERON:0000153!3.24e-14!94;UBERON:0007811!4.07e-13!86;UBERON:0000956!2.33e-12!21;UBERON:0001869!2.33e-12!21;UBERON:0000203!2.33e-12!21;UBERON:0002619!2.20e-10!17;UBERON:0003076!3.09e-07!12;UBERON:0003057!3.09e-07!12;UBERON:0002021!4.80e-07!10;UBERON:0000411!4.80e-07!10;UBERON:0001950!4.80e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.39e-28,75;UBERON:0001017,2.37e-27,73;UBERON:0000073,5.73e-26,54;UBERON:0004121,8.34e-26,95;UBERON:0000924,8.34e-26,95;UBERON:0006601,8.34e-26,95;UBERON:0001049,2.02e-24,52;UBERON:0005068,2.02e-24,52;UBERON:0006241,2.02e-24,52;UBERON:0007135,2.02e-24,52;UBERON:0002346,5.97e-24,64;UBERON:0003075,5.97e-24,64;UBERON:0007284,5.97e-24,64;UBERON:0010371,4.30e-22,73;UBERON:0000955,1.98e-21,47;UBERON:0006238,1.98e-21,47;UBERON:0010314,5.23e-21,92;UBERON:0002616,8.49e-21,46;UBERON:0002020,1.02e-19,34;UBERON:0003056,3.82e-18,49;UBERON:0003080,8.79e-18,40;UBERON:0002780,3.85e-17,39;UBERON:0001890,3.85e-17,39;UBERON:0006240,3.85e-17,39;UBERON:0003528,5.23e-17,29;UBERON:0002791,5.23e-17,29;UBERON:0001893,5.23e-17,29;UBERON:0000956,2.23e-12,21;UBERON:0001869,2.23e-12,21;UBERON:0000203,2.23e-12,21;UBERON:0002619,2.12e-10,17;UBERON:0003076,3.02e-07,12;UBERON:0003057,3.02e-07,12;UBERON:0002021,4.69e-07,10;UBERON:0000411,4.69e-07,10;UBERON:0001950,4.69e-07,10 | |||
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| |||
|short_description=p1@Ncs1 | |||
}} |
Revision as of 00:38, 5 August 2015
Short description: | p1@Ncs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ncs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000000199_5end |
EntrezGene: | 14299 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.08e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-13 | 23 |
neural cell | 4.36e-13 | 43 |
ectodermal cell | 1.02e-12 | 44 |
neurectodermal cell | 1.02e-12 | 44 |
electrically responsive cell | 3.19e-10 | 39 |
electrically active cell | 3.19e-10 | 39 |
neuron | 3.53e-10 | 33 |
neuronal stem cell | 3.53e-10 | 33 |
neuroblast | 3.53e-10 | 33 |
electrically signaling cell | 3.53e-10 | 33 |