FFCP PHASE1:Mm9::chr9:41389149..41389183,+: Difference between revisions
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{{FFCP|EntrezGene=100042464|HGNC=|UniProt=|association_with_transcript=-238bp_to_NR_015483,uc009pak.2,uc009pal.2_5end|description=CAGE_peak_4_at_2610203C20Rik_5end|id=chr9:41389149..41389183,+|ontology_enrichment_celltype=CL:0000117!5.01e-11!23;CL:0000337!5.01e-11!23;CL:0000393!4.64e-10!39;CL:0000211!4.64e-10!39;CL:0000540!3.83e-09!33;CL:0000047!3.83e-09!33;CL:0000031!3.83e-09!33;CL:0000404!3.83e-09!33;CL:0000221!8.38e-09!44;CL:0000133!8.38e-09!44;CL:0000055!1.14e-08!50;CL:0002319!3.11e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-15,23;CL:0000337,1.26e-15,23;CL:0000393,2.72e-14,39;CL:0000211,2.72e-14,39;CL:0000540,2.35e-13,33;CL:0000047,2.35e-13,33;CL:0000031,2.35e-13,33;CL:0000404,2.35e-13,33;CL:0000221,6.03e-12,44;CL:0000133,6.03e-12,44;CL:0002319,6.03e-11,43;CL:0002321,3.43e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.77e-22!63;UBERON:0000955!4.79e-20!50;UBERON:0006238!4.79e-20!50;UBERON:0002616!1.07e-19!49;UBERON:0001017!1.54e-19!73;UBERON:0005743!1.54e-19!73;UBERON:0001049!2.20e-19!52;UBERON:0005068!2.20e-19!52;UBERON:0006241!2.20e-19!52;UBERON:0007135!2.20e-19!52;UBERON:0000073!5.92e-19!75;UBERON:0001016!5.92e-19!75;UBERON:0004121!8.06e-17!102;UBERON:0000924!8.06e-17!102;UBERON:0006601!8.06e-17!102;UBERON:0003056!3.28e-16!49;UBERON:0003080!8.15e-16!40;UBERON:0002020!8.89e-16!34;UBERON:0002780!1.99e-15!39;UBERON:0001890!1.99e-15!39;UBERON:0006240!1.99e-15!39;UBERON:0002346!4.14e-15!71;UBERON:0003075!4.14e-15!71;UBERON:0007284!4.14e-15!71;UBERON:0002791!8.87e-15!29;UBERON:0003528!8.87e-15!29;UBERON:0001893!8.87e-15!29;UBERON:0000153!5.16e-12!94;UBERON:0007811!1.83e-11!86;UBERON:0000956!5.74e-11!21;UBERON:0001869!5.74e-11!21;UBERON:0000203!5.74e-11!21;UBERON:0002619!4.93e-09!17;UBERON:0004111!5.56e-09!122;UBERON:0000025!1.12e-08!114;UBERON:0002021!1.90e-07!10;UBERON:0000411!1.90e-07!10;UBERON:0001950!1.90e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.34e-27,54;UBERON:0001049,6.55e-24,52;UBERON:0005068,6.55e-24,52;UBERON:0006241,6.55e-24,52;UBERON:0007135,6.55e-24,52;UBERON:0001017,6.30e-23,73;UBERON:0002020,8.59e-23,34;UBERON:0001016,5.59e-22,75;UBERON:0002616,2.07e-21,46;UBERON:0002346,5.16e-21,64;UBERON:0003075,5.16e-21,64;UBERON:0007284,5.16e-21,64;UBERON:0000955,9.52e-21,47;UBERON:0006238,9.52e-21,47;UBERON:0010371,7.19e-20,73;UBERON:0003528,9.79e-20,29;UBERON:0002791,9.79e-20,29;UBERON:0001893,9.79e-20,29;UBERON:0003080,2.86e-19,40;UBERON:0004121,6.28e-19,95;UBERON:0000924,6.28e-19,95;UBERON:0006601,6.28e-19,95;UBERON:0002780,1.50e-18,39;UBERON:0001890,1.50e-18,39;UBERON:0006240,1.50e-18,39;UBERON:0003056,8.01e-18,49;UBERON:0010314,1.84e-15,92;UBERON:0000956,9.25e-15,21;UBERON:0001869,9.25e-15,21;UBERON:0000203,9.25e-15,21;UBERON:0002021,2.26e-13,10;UBERON:0000411,2.26e-13,10;UBERON:0001950,2.26e-13,10;UBERON:0002619,4.50e-12,17;UBERON:0004111,1.24e-09,122;UBERON:0000025,2.25e-09,114|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,1.00717454380462,2.33166941804883,0.550640256485045,1.56478268869608,1.09012578190223,0.219686182734472,0.58328969722285,0,0,0,0,0,0,2.29226751951005,0.515672092277442,0.606949382578793,3.70293685490423,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,3.7328260431052,3.78016627328734,1.89292465216244,1.14260393761521,0,1.34739879136449,2.68367318851062,0.919218786610021,1.10115880999389,1.40456071893706,2.15049146558741,0.923204014111357,2.10421580285542,1.56274011167028,1.67509799400829,1.68828783009504,2.75036845998258,3.24091444021034,1.28134512719193,1.3047961207771,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0.852151612890289,1.03914401841148,4.59341446863442,6.4787973097273,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0,0,0.520455980298408,0,0,0.452167921657868,0.587943535678524,0,0,0,0,0.808834249737046,0.441683036920787,0.484875253135222,0,1.17112318804619,0.83778682725382,0,0,0,0,1.04853447583376,0.457500602818626,3.39266750704734,0.521472960576829,0.767146371990992,1.45451631191692,0.973447578406546,1.12023300235348,0.497627882440372,0,0.631325567659422,1.04096354370163,0,0.180062129805349,1.35634336052144,1.02054748726992,0.896796041993948,0.655912071918102,0.258703370739016,0.646703978798527,0.567318240503458,0.703804496655795,0,2.50242524303038,2.089512999133,0.205782136407943,1.99034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0.393528463494808,0.462801338662135,1.39520366850245,0.536546802799238,0.817357396570186,0.329119699826961,0.656669856316381,0.486412857275134,0.438599962275997,0.658650345873152,0.134206418760372,0.630869845692382,4.52780294468852,0,0,1.06644125267617,1.85789337488351,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0,0.569003702859245,0.45699405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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100042464 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-238bp_to_NR_015483,uc009pak.2,uc009pal.2_5end | |||
|cluster_id=chr9:41389149..41389183,+ | |||
|description=CAGE_peak_4_at_2610203C20Rik_5end | |||
|id=chr9:41389149..41389183,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.01e-11!23;CL:0000337!5.01e-11!23;CL:0000393!4.64e-10!39;CL:0000211!4.64e-10!39;CL:0000540!3.83e-09!33;CL:0000047!3.83e-09!33;CL:0000031!3.83e-09!33;CL:0000404!3.83e-09!33;CL:0000221!8.38e-09!44;CL:0000133!8.38e-09!44;CL:0000055!1.14e-08!50;CL:0002319!3.11e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-15,23;CL:0000337,1.26e-15,23;CL:0000393,2.72e-14,39;CL:0000211,2.72e-14,39;CL:0000540,2.35e-13,33;CL:0000047,2.35e-13,33;CL:0000031,2.35e-13,33;CL:0000404,2.35e-13,33;CL:0000221,6.03e-12,44;CL:0000133,6.03e-12,44;CL:0002319,6.03e-11,43;CL:0002321,3.43e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.77e-22!63;UBERON:0000955!4.79e-20!50;UBERON:0006238!4.79e-20!50;UBERON:0002616!1.07e-19!49;UBERON:0001017!1.54e-19!73;UBERON:0005743!1.54e-19!73;UBERON:0001049!2.20e-19!52;UBERON:0005068!2.20e-19!52;UBERON:0006241!2.20e-19!52;UBERON:0007135!2.20e-19!52;UBERON:0000073!5.92e-19!75;UBERON:0001016!5.92e-19!75;UBERON:0004121!8.06e-17!102;UBERON:0000924!8.06e-17!102;UBERON:0006601!8.06e-17!102;UBERON:0003056!3.28e-16!49;UBERON:0003080!8.15e-16!40;UBERON:0002020!8.89e-16!34;UBERON:0002780!1.99e-15!39;UBERON:0001890!1.99e-15!39;UBERON:0006240!1.99e-15!39;UBERON:0002346!4.14e-15!71;UBERON:0003075!4.14e-15!71;UBERON:0007284!4.14e-15!71;UBERON:0002791!8.87e-15!29;UBERON:0003528!8.87e-15!29;UBERON:0001893!8.87e-15!29;UBERON:0000153!5.16e-12!94;UBERON:0007811!1.83e-11!86;UBERON:0000956!5.74e-11!21;UBERON:0001869!5.74e-11!21;UBERON:0000203!5.74e-11!21;UBERON:0002619!4.93e-09!17;UBERON:0004111!5.56e-09!122;UBERON:0000025!1.12e-08!114;UBERON:0002021!1.90e-07!10;UBERON:0000411!1.90e-07!10;UBERON:0001950!1.90e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.34e-27,54;UBERON:0001049,6.55e-24,52;UBERON:0005068,6.55e-24,52;UBERON:0006241,6.55e-24,52;UBERON:0007135,6.55e-24,52;UBERON:0001017,6.30e-23,73;UBERON:0002020,8.59e-23,34;UBERON:0001016,5.59e-22,75;UBERON:0002616,2.07e-21,46;UBERON:0002346,5.16e-21,64;UBERON:0003075,5.16e-21,64;UBERON:0007284,5.16e-21,64;UBERON:0000955,9.52e-21,47;UBERON:0006238,9.52e-21,47;UBERON:0010371,7.19e-20,73;UBERON:0003528,9.79e-20,29;UBERON:0002791,9.79e-20,29;UBERON:0001893,9.79e-20,29;UBERON:0003080,2.86e-19,40;UBERON:0004121,6.28e-19,95;UBERON:0000924,6.28e-19,95;UBERON:0006601,6.28e-19,95;UBERON:0002780,1.50e-18,39;UBERON:0001890,1.50e-18,39;UBERON:0006240,1.50e-18,39;UBERON:0003056,8.01e-18,49;UBERON:0010314,1.84e-15,92;UBERON:0000956,9.25e-15,21;UBERON:0001869,9.25e-15,21;UBERON:0000203,9.25e-15,21;UBERON:0002021,2.26e-13,10;UBERON:0000411,2.26e-13,10;UBERON:0001950,2.26e-13,10;UBERON:0002619,4.50e-12,17;UBERON:0004111,1.24e-09,122;UBERON:0000025,2.25e-09,114 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,1.00717454380462,2.33166941804883,0.550640256485045,1.56478268869608,1.09012578190223,0.219686182734472,0.58328969722285,0,0,0,0,0,0,2.29226751951005,0.515672092277442,0.606949382578793,3.70293685490423,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,3.7328260431052,3.78016627328734,1.89292465216244,1.14260393761521,0,1.34739879136449,2.68367318851062,0.919218786610021,1.10115880999389,1.40456071893706,2.15049146558741,0.923204014111357,2.10421580285542,1.56274011167028,1.67509799400829,1.68828783009504,2.75036845998258,3.24091444021034,1.28134512719193,1.3047961207771,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0.852151612890289,1.03914401841148,4.59341446863442,6.4787973097273,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0,0,0.520455980298408,0,0,0.452167921657868,0.587943535678524,0,0,0,0,0.808834249737046,0.441683036920787,0.484875253135222,0,1.17112318804619,0.83778682725382,0,0,0,0,1.04853447583376,0.457500602818626,3.39266750704734,0.521472960576829,0.767146371990992,1.45451631191692,0.973447578406546,1.12023300235348,0.497627882440372,0,0.631325567659422,1.04096354370163,0,0.180062129805349,1.35634336052144,1.02054748726992,0.896796041993948,0.655912071918102,0.258703370739016,0.646703978798527,0.567318240503458,0.703804496655795,0,2.50242524303038,2.089512999133,0.205782136407943,1.99034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0.393528463494808,0.462801338662135,1.39520366850245,0.536546802799238,0.817357396570186,0.329119699826961,0.656669856316381,0.486412857275134,0.438599962275997,0.658650345873152,0.134206418760372,0.630869845692382,4.52780294468852,0,0,1.06644125267617,1.85789337488351,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0,0.569003702859245,0.456994050438915,0,0.814605311381257,0.775809948670503,0.420814919341911,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0,0,0.568474235311454,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.478364305972461,0.655453258862952,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0.481651769963376,1.28932855251423,0,0.252470927204373,0,0,0,0.477937595905104,0,0.283076530788832,1.61924280669958,0.876767573733936,1.18586333383957,0.963963949265421,0,0.890328018336276,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0,0,0,0,0,1.26042765821917,0.646793418913773,1.28602221018955,0.354680467284547,0.356737635204141,1.15184314421485,0.304464949114599,0.23467170806371,0,0,0.32977250588296,0.322928853391811,0.422190474497091,0.119372344003136,0.164140899745061,0,0.556275906031529,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,1.10717597753397,0.406638934253697,0.756037385752609,1.46361807210128,0.436725127492355,1.07891477107857,0.330613822901344,0.26175594198403,0.259229946583586,0.621339313086926,0,0.598066184175915,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.821500670520278,0.781226309063701,0.104859344425711,0,0,0,0.405450430580328,0.924398614483445,0.25984164595559,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,0.36630324853453,0.214368379079066,0,3.95326289831947,2.76195141904306,1.14579102687879,5.15559547031063,2.05524755931193,2.2661816921691,2.70009000092722,2.70192721934532,1.35942722695261,1.55328093525546,0.518936737920883,0.399024873401031,0.853668028770671,1.94485373654635,0.628839487883947,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,1.01078884705519,0.50695859978048,0.754505365544305,0.280924522409647,1.02440243847791,0.402048282689293,0.476293691283074,1.15884325944855,0.578727661391115,0.824171801606613,0.588795680537589,1.37147700954166,1.06485483695602,0.476872379894642,1.0174249164263,0.282328141245992,1.01537529470012,1.09756783723664,1.57841826862706,0.543216455383447,0,1.06771516311757,0.29551344712669,0.818462086339379,0.77468420592983,0.964533054905707,0.749431733813838,0.467863216890817,0.214871054048298,0.191288332068843,0,0.463735671240843 | |||
|short_description=p4@2610203C20Rik | |||
}} |
Revision as of 02:39, 5 August 2015
Short description: | p4@2610203C20Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_2610203C20Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | -238bp_to_NR_015483, uc009pak.2, uc009pal.2_5end |
EntrezGene: | 100042464 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.26e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.26e-15 | 23 |
electrically responsive cell | 2.72e-14 | 39 |
electrically active cell | 2.72e-14 | 39 |
neuron | 2.35e-13 | 33 |
neuronal stem cell | 2.35e-13 | 33 |
neuroblast | 2.35e-13 | 33 |
electrically signaling cell | 2.35e-13 | 33 |
ectodermal cell | 6.03e-12 | 44 |
neurectodermal cell | 6.03e-12 | 44 |
neural cell | 6.03e-11 | 43 |
embryonic cell | 3.43e-07 | 70 |