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FFCP PHASE1:Mm9::chr17:71201096..71201114,-: Difference between revisions

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{{FFCP|EntrezGene=21815|HGNC=|MCL_coexpression_id=48|UniProt=P70284,G3UWC5|association_with_transcript=-22bp_to_ENSMUST00000117294,ENSMUST00000166395,NM_001164075,uc008dlq.2_5end|description=CAGE_peak_6_at_Tgif1_5end|id=chr17:71201096..71201114,-|ontology_enrichment_celltype=CL:0000219!1.51e-11!54;CL:0002320!2.08e-10!46;CL:0000134!2.08e-10!46;CL:0000988!2.55e-10!32;CL:0002032!2.55e-10!32;CL:0000037!2.55e-10!32;CL:0000566!2.55e-10!32;CL:0000837!2.55e-10!32;CL:0000063!2.03e-08!66;CL:0000144!4.02e-08!121;CL:0000012!4.02e-08!121;CL:0002031!1.02e-07!25;CL:0000034!1.08e-07!97;CL:0002371!5.29e-07!118;CL:0000723!6.39e-07!91;CL:0000048!6.39e-07!91;CL:0000049!7.17e-07!19|ontology_enrichment_celltype_v019_2=CL:0002320,5.45e-28,46;CL:0000134,5.45e-28,46;CL:0000219,1.11e-26,54;CL:0000988,2.56e-23,32;CL:0002032,2.56e-23,32;CL:0000037,2.56e-23,32;CL:0000837,2.56e-23,32;CL:0000034,2.18e-19,97;CL:0000723,4.72e-17,91;CL:0000048,4.72e-17,91;CL:0002031,2.33e-15,25;CL:0000049,1.34e-14,19;CL:0000738,5.43e-13,17;CL:0002087,5.43e-13,17;CL:0000791,3.71e-11,9;CL:0000789,3.71e-11,9;CL:0002420,3.71e-11,9;CL:0002419,3.71e-11,9;CL:0000790,3.71e-11,9;CL:0000838,1.32e-10,12;CL:0000763,2.06e-10,16;CL:0000557,1.17e-09,7;CL:0000542,1.18e-09,13;CL:0000051,1.18e-09,13;CL:0000624,2.21e-09,8;CL:0000084,6.95e-09,11;CL:0000827,6.95e-09,11;CL:0002092,2.23e-07,3;CL:0002540,2.23e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!4.67e-11!32;UBERON:0002384!2.08e-10!46;UBERON:0001474!5.77e-09!22;UBERON:0004765!5.77e-09!22;UBERON:0001434!5.77e-09!22;UBERON:0002371!1.59e-08!16|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.45e-28,46;UBERON:0002371,3.54e-16,16;UBERON:0002204,4.46e-12,32;UBERON:0001474,5.99e-11,22;UBERON:0004765,5.99e-11,22;UBERON:0001434,5.99e-11,22;UBERON:0002390,4.03e-08,45;UBERON:0003061,4.03e-08,45;UBERON:0002193,2.28e-07,48;UBERON:0002405,2.28e-07,48|phase1_expression=0.80074423552397,0,0,0.30246421130683,0.500895729946347,0.33575854382378,0,1.80772652818207,16.7538579360483,16.3845168425395,8.73211637950075,5.2649624936922,0.342401459862411,0.437102012094987,0,0.404950534779652,0.699561878128147,4.10100814965709,3.83920414096069,5.09267582157636,0.255129870453209,0.0992909512008853,0,0.47997726838022,0,0,0,0.215471232685889,0,0.252030129759931,0,0,1.23012957516914,0,0.288851619751275,0.332469290716985,0,1.67412652294763,1.5626706890476,0.523523743973798,5.88231488031014,0.683045484958446,0.485510353031154,0.251793635951155,0.608261587317087,0,0.782391344348039,0.436050312760893,0.659058548203415,0.58328969722285,0,0,57.0460860596304,9.42970784614748,7.73015738027667,1.28629718017973,1.71920063963254,0.515672092277442,0.404632921719196,0,0,0,0,7.19919773825119,10.8775299882367,8.5257613793532,1.49800055259202,0.384218305321555,0.207379224616955,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0,0,2.27178579999552,2.56943304363071,0,0,4.75979933595425,1.07940638327563,0,0,0.140444420131752,1.53387290320252,1.03914401841148,0.70667914902068,0.563373679106722,0,0,0,1.29894624606728,0.760079596425296,0.505524445014783,0.11418387971906,0.776813650941515,0.29688427812965,0,0.304465478312141,0,0,0.470354828542819,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,2.15667224110656,1.79970819298022,3.43089613097275,0.149790639404823,0,0,0,0,0,0,0.203678727700633,1.36847667671102,1.26361379216837,0.210441855886474,0.390361328888111,0.229902104433473,0.720248519221397,0,0.204109497453984,0.12811372028485,0.187403449119458,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,3.51106593656617,2.57347907114715,3.12579849335152,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0.329119699826961,0,0.324275238183423,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0.140271639780637,0,0.147610147979602,0.156998727841375,0,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0,0.972811360650212,1.64736847912849,1.43768206527355,1.86070473834252,0.936113019343682,1.01031551178845,0.538192240565737,0.964887042726734,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,4.52373851817817,2.71952841909355,0,0.275936746304732,0.160550589987792,0,0.655739781506702,0.252470927204373,0.315508219416257,0,0.430846795465598,0.477937595905104,1.55959071857676,1.13230612315533,0.404810701674894,0.584511715822624,0.790575555893047,0,0,0,0.162886959353576,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,1.03371317267288,0,0,0,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0.469343416127421,0.847328283455281,0.441056796109924,0,0.322928853391811,0.542816324353403,0.477489376012546,0.164140899745061,0,0,0.854354403989263,0,0.185194527369712,0.565105371014073,0.27338845544205,0.915112692826091,2.71965487990169,2.23922323717853,1.93479963326193,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0.259229946583586,0.621339313086926,0.56369293868419,0,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0,0.221985953374065,0.0897138566094757,0,0,0.187682475451182,0.549454872801795,0.428736758158132,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.347652977834566,0,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0.561142271657738,0,0.197008964751127,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,1.14772999241306,0.441182838239031,0.463735671240843|short_description=p6@Tgif1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:21815
|HGNC=
|MCL_coexpression_id=48
|TSSclassifier=NA
|UniProt=uniprot:P70284,uniprot:G3UWC5
|association_with_transcript=-22bp_to_ENSMUST00000117294,ENSMUST00000166395,NM_001164075,uc008dlq.2_5end
|cluster_id=chr17:71201096..71201114,-
|description=CAGE_peak_6_at_Tgif1_5end
|id=chr17:71201096..71201114,-
|ontology_enrichment_celltype=CL:0000219!1.51e-11!54;CL:0002320!2.08e-10!46;CL:0000134!2.08e-10!46;CL:0000988!2.55e-10!32;CL:0002032!2.55e-10!32;CL:0000037!2.55e-10!32;CL:0000566!2.55e-10!32;CL:0000837!2.55e-10!32;CL:0000063!2.03e-08!66;CL:0000144!4.02e-08!121;CL:0000012!4.02e-08!121;CL:0002031!1.02e-07!25;CL:0000034!1.08e-07!97;CL:0002371!5.29e-07!118;CL:0000723!6.39e-07!91;CL:0000048!6.39e-07!91;CL:0000049!7.17e-07!19
|ontology_enrichment_celltype_v019_2=CL:0002320,5.45e-28,46;CL:0000134,5.45e-28,46;CL:0000219,1.11e-26,54;CL:0000988,2.56e-23,32;CL:0002032,2.56e-23,32;CL:0000037,2.56e-23,32;CL:0000837,2.56e-23,32;CL:0000034,2.18e-19,97;CL:0000723,4.72e-17,91;CL:0000048,4.72e-17,91;CL:0002031,2.33e-15,25;CL:0000049,1.34e-14,19;CL:0000738,5.43e-13,17;CL:0002087,5.43e-13,17;CL:0000791,3.71e-11,9;CL:0000789,3.71e-11,9;CL:0002420,3.71e-11,9;CL:0002419,3.71e-11,9;CL:0000790,3.71e-11,9;CL:0000838,1.32e-10,12;CL:0000763,2.06e-10,16;CL:0000557,1.17e-09,7;CL:0000542,1.18e-09,13;CL:0000051,1.18e-09,13;CL:0000624,2.21e-09,8;CL:0000084,6.95e-09,11;CL:0000827,6.95e-09,11;CL:0002092,2.23e-07,3;CL:0002540,2.23e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002204!4.67e-11!32;UBERON:0002384!2.08e-10!46;UBERON:0001474!5.77e-09!22;UBERON:0004765!5.77e-09!22;UBERON:0001434!5.77e-09!22;UBERON:0002371!1.59e-08!16
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.45e-28,46;UBERON:0002371,3.54e-16,16;UBERON:0002204,4.46e-12,32;UBERON:0001474,5.99e-11,22;UBERON:0004765,5.99e-11,22;UBERON:0001434,5.99e-11,22;UBERON:0002390,4.03e-08,45;UBERON:0003061,4.03e-08,45;UBERON:0002193,2.28e-07,48;UBERON:0002405,2.28e-07,48
|phase1_expression=0.80074423552397,0,0,0.30246421130683,0.500895729946347,0.33575854382378,0,1.80772652818207,16.7538579360483,16.3845168425395,8.73211637950075,5.2649624936922,0.342401459862411,0.437102012094987,0,0.404950534779652,0.699561878128147,4.10100814965709,3.83920414096069,5.09267582157636,0.255129870453209,0.0992909512008853,0,0.47997726838022,0,0,0,0.215471232685889,0,0.252030129759931,0,0,1.23012957516914,0,0.288851619751275,0.332469290716985,0,1.67412652294763,1.5626706890476,0.523523743973798,5.88231488031014,0.683045484958446,0.485510353031154,0.251793635951155,0.608261587317087,0,0.782391344348039,0.436050312760893,0.659058548203415,0.58328969722285,0,0,57.0460860596304,9.42970784614748,7.73015738027667,1.28629718017973,1.71920063963254,0.515672092277442,0.404632921719196,0,0,0,0,7.19919773825119,10.8775299882367,8.5257613793532,1.49800055259202,0.384218305321555,0.207379224616955,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0,0,2.27178579999552,2.56943304363071,0,0,4.75979933595425,1.07940638327563,0,0,0.140444420131752,1.53387290320252,1.03914401841148,0.70667914902068,0.563373679106722,0,0,0,1.29894624606728,0.760079596425296,0.505524445014783,0.11418387971906,0.776813650941515,0.29688427812965,0,0.304465478312141,0,0,0.470354828542819,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,2.15667224110656,1.79970819298022,3.43089613097275,0.149790639404823,0,0,0,0,0,0,0.203678727700633,1.36847667671102,1.26361379216837,0.210441855886474,0.390361328888111,0.229902104433473,0.720248519221397,0,0.204109497453984,0.12811372028485,0.187403449119458,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,3.51106593656617,2.57347907114715,3.12579849335152,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0.329119699826961,0,0.324275238183423,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0.140271639780637,0,0.147610147979602,0.156998727841375,0,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0,0.972811360650212,1.64736847912849,1.43768206527355,1.86070473834252,0.936113019343682,1.01031551178845,0.538192240565737,0.964887042726734,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,4.52373851817817,2.71952841909355,0,0.275936746304732,0.160550589987792,0,0.655739781506702,0.252470927204373,0.315508219416257,0,0.430846795465598,0.477937595905104,1.55959071857676,1.13230612315533,0.404810701674894,0.584511715822624,0.790575555893047,0,0,0,0.162886959353576,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,1.03371317267288,0,0,0,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0.469343416127421,0.847328283455281,0.441056796109924,0,0.322928853391811,0.542816324353403,0.477489376012546,0.164140899745061,0,0,0.854354403989263,0,0.185194527369712,0.565105371014073,0.27338845544205,0.915112692826091,2.71965487990169,2.23922323717853,1.93479963326193,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0.259229946583586,0.621339313086926,0.56369293868419,0,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0,0.221985953374065,0.0897138566094757,0,0,0.187682475451182,0.549454872801795,0.428736758158132,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.347652977834566,0,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0.561142271657738,0,0.197008964751127,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,1.14772999241306,0.441182838239031,0.463735671240843
|short_description=p6@Tgif1
}}

Revision as of 07:01, 5 August 2015

Short description:p6@Tgif1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Tgif1_5end
Coexpression cluster:MCL_coexpression_mm9:48
Association with transcript: -22bp_to_ENSMUST00000117294, ENSMUST00000166395, NM_001164075, uc008dlq.2_5end
EntrezGene:21815
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Tgif1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.75
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.26
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A257.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D92.27
Mouse Schwann, donor2.CNhs12573.11746-123F92.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.43
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
connective tissue cell5.45e-2846
mesenchymal cell5.45e-2846
motile cell1.11e-2654
hematopoietic cell2.56e-2332
hematopoietic oligopotent progenitor cell2.56e-2332
hematopoietic stem cell2.56e-2332
hematopoietic multipotent progenitor cell2.56e-2332
stem cell2.18e-1997
somatic stem cell4.72e-1791
multi fate stem cell4.72e-1791
hematopoietic lineage restricted progenitor cell2.33e-1525
common myeloid progenitor1.34e-1419
leukocyte5.43e-1317
nongranular leukocyte5.43e-1317
mature alpha-beta T cell3.71e-119
alpha-beta T cell3.71e-119
immature T cell3.71e-119
mature T cell3.71e-119
immature alpha-beta T cell3.71e-119
lymphoid lineage restricted progenitor cell1.32e-1012
myeloid cell2.06e-1016
granulocyte monocyte progenitor cell1.17e-097
lymphocyte1.18e-0913
common lymphoid progenitor1.18e-0913
CD4-positive, alpha-beta T cell2.21e-098
T cell6.95e-0911
pro-T cell6.95e-0911
bone marrow cell2.23e-073
mesenchymal stem cell of the bone marrow2.23e-073

Uber anatomy
Ontology termp-valuen
connective tissue5.45e-2846
bone marrow3.54e-1616
musculoskeletal system4.46e-1232
bone element5.99e-1122
skeletal element5.99e-1122
skeletal system5.99e-1122
hematopoietic system4.03e-0845
blood island4.03e-0845
hemolymphoid system2.28e-0748
immune system2.28e-0748
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