FFCP PHASE1:Mm9::chr6:144996050..144996074,-: Difference between revisions
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{{FFCP|EntrezGene=12035|HGNC=|UniProt=B2KFA9|association_with_transcript=106bp_to_ENSMUST00000149769_5end|description=CAGE_peak_9_at_Bcat1_5end|id=chr6:144996050..144996074,-|ontology_enrichment_celltype=CL:0002319!1.53e-13!43;CL:0000221!2.62e-13!44;CL:0000133!2.62e-13!44;CL:0000055!2.59e-11!50;CL:0000117!3.70e-10!23;CL:0000337!3.70e-10!23;CL:0000540!7.25e-10!33;CL:0000047!7.25e-10!33;CL:0000031!7.25e-10!33;CL:0000404!7.25e-10!33;CL:0000393!2.16e-08!39;CL:0000211!2.16e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-11,23;CL:0000337,1.45e-11,23;CL:0002319,3.10e-11,43;CL:0000221,8.29e-11,44;CL:0000133,8.29e-11,44;CL:0000540,2.34e-07,33;CL:0000047,2.34e-07,33;CL:0000031,2.34e-07,33;CL:0000404,2.34e-07,33;CL:0000393,3.12e-07,39;CL:0000211,3.12e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.60e-32!102;UBERON:0000924!2.60e-32!102;UBERON:0006601!2.60e-32!102;UBERON:0002346!1.11e-30!71;UBERON:0003075!1.11e-30!71;UBERON:0007284!1.11e-30!71;UBERON:0000073!6.48e-30!75;UBERON:0001016!6.48e-30!75;UBERON:0001017!2.08e-28!73;UBERON:0005743!2.08e-28!73;UBERON:0000033!1.17e-27!63;UBERON:0000955!1.26e-23!50;UBERON:0006238!1.26e-23!50;UBERON:0003056!1.31e-23!49;UBERON:0001049!2.35e-23!52;UBERON:0005068!2.35e-23!52;UBERON:0006241!2.35e-23!52;UBERON:0007135!2.35e-23!52;UBERON:0002616!8.31e-23!49;UBERON:0003080!1.75e-17!40;UBERON:0002780!7.84e-17!39;UBERON:0001890!7.84e-17!39;UBERON:0006240!7.84e-17!39;UBERON:0002020!5.61e-16!34;UBERON:0002791!1.24e-14!29;UBERON:0003528!1.24e-14!29;UBERON:0001893!1.24e-14!29;UBERON:0000153!7.21e-14!94;UBERON:0007811!1.15e-13!86;UBERON:0000956!2.37e-11!21;UBERON:0001869!2.37e-11!21;UBERON:0000203!2.37e-11!21;UBERON:0002619!2.07e-09!17;UBERON:0000970!4.26e-07!9;UBERON:0000019!4.26e-07!9;UBERON:0000047!4.26e-07!9;UBERON:0004088!4.26e-07!9;UBERON:0002104!4.26e-07!9;UBERON:0001456!4.26e-07!9;UBERON:0003072!4.26e-07!9;UBERON:0003071!4.26e-07!9;UBERON:0004128!4.26e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.93e-36,95;UBERON:0000924,5.93e-36,95;UBERON:0006601,5.93e-36,95;UBERON:0002346,2.90e-35,64;UBERON:0003075,2.90e-35,64;UBERON:0007284,2.90e-35,64;UBERON:0001016,9.05e-33,75;UBERON:0003056,1.75e-32,49;UBERON:0001017,1.45e-30,73;UBERON:0000073,2.79e-29,54;UBERON:0010371,6.08e-29,73;UBERON:0001049,1.16e-27,52;UBERON:0005068,1.16e-27,52;UBERON:0006241,1.16e-27,52;UBERON:0007135,1.16e-27,52;UBERON:0000955,4.98e-27,47;UBERON:0006238,4.98e-27,47;UBERON:0002616,8.76e-26,46;UBERON:0010314,3.99e-23,92;UBERON:0003080,1.22e-22,40;UBERON:0002780,1.31e-21,39;UBERON:0001890,1.31e-21,39;UBERON:0006240,1.31e-21,39;UBERON:0002020,7.14e-21,34;UBERON:0003528,1.20e-20,29;UBERON:0002791,1.20e-20,29;UBERON:0001893,1.20e-20,29;UBERON:0000956,1.48e-16,21;UBERON:0001869,1.48e-16,21;UBERON:0000203,1.48e-16,21;UBERON:0002619,2.63e-13,17;UBERON:0000970,6.81e-11,9;UBERON:0000019,6.81e-11,9;UBERON:0000047,6.81e-11,9;UBERON:0010312,6.81e-11,9;UBERON:0004088,6.81e-11,9;UBERON:0002104,6.81e-11,9;UBERON:0001456,6.81e-11,9;UBERON:0003072,6.81e-11,9;UBERON:0004128,6.81e-11,9;UBERON:0003071,6.81e-11,9;UBERON:0002021,4.21e-09,10;UBERON:0000411,4.21e-09,10;UBERON:0001950,4.21e-09,10;UBERON:0000025,1.40e-08,114;UBERON:0001444,1.87e-08,11;UBERON:0004111,7.25e-08,122;UBERON:0000020,1.51e-07,12;UBERON:0001032,1.51e-07,12;UBERON:0004456,1.51e-07,12;UBERON:0000033,8.75e-07,13;UBERON:0005085,8.75e-07,13|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,5.71184075109627,3.69416808241138,4.19959264876088,4.31257693094915,0,0,0,3.34437266846731,3.43840127926508,0,1.82084814773638,3.1739458756322,1.26766280701236,0,0,0,0,0,0,1.53687322128622,3.11068836925433,2.16009501330705,1.68259969081106,0.571301968807607,1.98781686856452,1.5923803897944,2.49198224647415,0.919218786610021,3.30347642998166,2.42605942361857,4.14737639791857,0.923204014111357,1.64677758484337,2.6045668527838,1.67509799400829,1.12552522006336,3.20876320331301,0.589257170947335,2.56269025438385,1.1183966749518,3.71058347332602,7.78387069099891,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.346970653532272,0.608930956624282,0.461230994512117,0.452167921657868,0.470354828542819,0.502666365318702,0,0.144599356919912,0,1.45590164952668,0.220841518460394,0,0,7.61230072230023,8.16842156572475,0,0,0,0,4.19413790333504,4.11750542536764,1.13088916901578,3.82413504423008,4.34716277461562,4.77912502486988,6.97637431191358,0.203678727700633,0.124406970610093,0,5.05060454127538,3.6433724029557,2.06911893990126,2.52086981727489,4.52114453507145,5.78310242786287,10.6334387836425,10.4945931506896,9.31332134660456,0.431135985865684,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0,1.05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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12035 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B2KFA9 | |||
|association_with_transcript=106bp_to_ENSMUST00000149769_5end | |||
|cluster_id=chr6:144996050..144996074,- | |||
|description=CAGE_peak_9_at_Bcat1_5end | |||
|id=chr6:144996050..144996074,- | |||
|ontology_enrichment_celltype=CL:0002319!1.53e-13!43;CL:0000221!2.62e-13!44;CL:0000133!2.62e-13!44;CL:0000055!2.59e-11!50;CL:0000117!3.70e-10!23;CL:0000337!3.70e-10!23;CL:0000540!7.25e-10!33;CL:0000047!7.25e-10!33;CL:0000031!7.25e-10!33;CL:0000404!7.25e-10!33;CL:0000393!2.16e-08!39;CL:0000211!2.16e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-11,23;CL:0000337,1.45e-11,23;CL:0002319,3.10e-11,43;CL:0000221,8.29e-11,44;CL:0000133,8.29e-11,44;CL:0000540,2.34e-07,33;CL:0000047,2.34e-07,33;CL:0000031,2.34e-07,33;CL:0000404,2.34e-07,33;CL:0000393,3.12e-07,39;CL:0000211,3.12e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.60e-32!102;UBERON:0000924!2.60e-32!102;UBERON:0006601!2.60e-32!102;UBERON:0002346!1.11e-30!71;UBERON:0003075!1.11e-30!71;UBERON:0007284!1.11e-30!71;UBERON:0000073!6.48e-30!75;UBERON:0001016!6.48e-30!75;UBERON:0001017!2.08e-28!73;UBERON:0005743!2.08e-28!73;UBERON:0000033!1.17e-27!63;UBERON:0000955!1.26e-23!50;UBERON:0006238!1.26e-23!50;UBERON:0003056!1.31e-23!49;UBERON:0001049!2.35e-23!52;UBERON:0005068!2.35e-23!52;UBERON:0006241!2.35e-23!52;UBERON:0007135!2.35e-23!52;UBERON:0002616!8.31e-23!49;UBERON:0003080!1.75e-17!40;UBERON:0002780!7.84e-17!39;UBERON:0001890!7.84e-17!39;UBERON:0006240!7.84e-17!39;UBERON:0002020!5.61e-16!34;UBERON:0002791!1.24e-14!29;UBERON:0003528!1.24e-14!29;UBERON:0001893!1.24e-14!29;UBERON:0000153!7.21e-14!94;UBERON:0007811!1.15e-13!86;UBERON:0000956!2.37e-11!21;UBERON:0001869!2.37e-11!21;UBERON:0000203!2.37e-11!21;UBERON:0002619!2.07e-09!17;UBERON:0000970!4.26e-07!9;UBERON:0000019!4.26e-07!9;UBERON:0000047!4.26e-07!9;UBERON:0004088!4.26e-07!9;UBERON:0002104!4.26e-07!9;UBERON:0001456!4.26e-07!9;UBERON:0003072!4.26e-07!9;UBERON:0003071!4.26e-07!9;UBERON:0004128!4.26e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.93e-36,95;UBERON:0000924,5.93e-36,95;UBERON:0006601,5.93e-36,95;UBERON:0002346,2.90e-35,64;UBERON:0003075,2.90e-35,64;UBERON:0007284,2.90e-35,64;UBERON:0001016,9.05e-33,75;UBERON:0003056,1.75e-32,49;UBERON:0001017,1.45e-30,73;UBERON:0000073,2.79e-29,54;UBERON:0010371,6.08e-29,73;UBERON:0001049,1.16e-27,52;UBERON:0005068,1.16e-27,52;UBERON:0006241,1.16e-27,52;UBERON:0007135,1.16e-27,52;UBERON:0000955,4.98e-27,47;UBERON:0006238,4.98e-27,47;UBERON:0002616,8.76e-26,46;UBERON:0010314,3.99e-23,92;UBERON:0003080,1.22e-22,40;UBERON:0002780,1.31e-21,39;UBERON:0001890,1.31e-21,39;UBERON:0006240,1.31e-21,39;UBERON:0002020,7.14e-21,34;UBERON:0003528,1.20e-20,29;UBERON:0002791,1.20e-20,29;UBERON:0001893,1.20e-20,29;UBERON:0000956,1.48e-16,21;UBERON:0001869,1.48e-16,21;UBERON:0000203,1.48e-16,21;UBERON:0002619,2.63e-13,17;UBERON:0000970,6.81e-11,9;UBERON:0000019,6.81e-11,9;UBERON:0000047,6.81e-11,9;UBERON:0010312,6.81e-11,9;UBERON:0004088,6.81e-11,9;UBERON:0002104,6.81e-11,9;UBERON:0001456,6.81e-11,9;UBERON:0003072,6.81e-11,9;UBERON:0004128,6.81e-11,9;UBERON:0003071,6.81e-11,9;UBERON:0002021,4.21e-09,10;UBERON:0000411,4.21e-09,10;UBERON:0001950,4.21e-09,10;UBERON:0000025,1.40e-08,114;UBERON:0001444,1.87e-08,11;UBERON:0004111,7.25e-08,122;UBERON:0000020,1.51e-07,12;UBERON:0001032,1.51e-07,12;UBERON:0004456,1.51e-07,12;UBERON:0000033,8.75e-07,13;UBERON:0005085,8.75e-07,13 | |||
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|short_description=p9@Bcat1 | |||
}} |
Revision as of 09:40, 5 August 2015
Short description: | p9@Bcat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Bcat1_5end |
Coexpression cluster: | NA |
Association with transcript: | 106bp_to_ENSMUST00000149769_5end |
EntrezGene: | 12035 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.45e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.45e-11 | 23 |
neural cell | 3.10e-11 | 43 |
ectodermal cell | 8.29e-11 | 44 |
neurectodermal cell | 8.29e-11 | 44 |
neuron | 2.34e-07 | 33 |
neuronal stem cell | 2.34e-07 | 33 |
neuroblast | 2.34e-07 | 33 |
electrically signaling cell | 2.34e-07 | 33 |
electrically responsive cell | 3.12e-07 | 39 |
electrically active cell | 3.12e-07 | 39 |