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FFCP PHASE1:Mm9::chr1:191167586..191167628,-: Difference between revisions

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{{FFCP|EntrezGene=16526|HGNC=|UniProt=G3X9U8,P97438,Q6P6P9|association_with_transcript=-3bp_to_NM_010607,uc011wyj.1_5end|description=CAGE_peak_1_at_Kcnk2_5end|id=chr1:191167586..191167628,-|ontology_enrichment_celltype=CL:0000117!1.32e-07!23;CL:0000337!1.32e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-07,23;CL:0000337,2.22e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.77e-22!52;UBERON:0005068!9.77e-22!52;UBERON:0006241!9.77e-22!52;UBERON:0007135!9.77e-22!52;UBERON:0003080!5.24e-20!40;UBERON:0000955!5.55e-20!50;UBERON:0006238!5.55e-20!50;UBERON:0002780!1.46e-19!39;UBERON:0001890!1.46e-19!39;UBERON:0006240!1.46e-19!39;UBERON:0003056!2.07e-19!49;UBERON:0002616!2.27e-19!49;UBERON:0001017!2.41e-19!73;UBERON:0005743!2.41e-19!73;UBERON:0000033!3.47e-19!63;UBERON:0004121!7.88e-19!102;UBERON:0000924!7.88e-19!102;UBERON:0006601!7.88e-19!102;UBERON:0000073!1.52e-18!75;UBERON:0001016!1.52e-18!75;UBERON:0002346!5.40e-18!71;UBERON:0003075!5.40e-18!71;UBERON:0007284!5.40e-18!71;UBERON:0000153!4.74e-17!94;UBERON:0002020!5.66e-16!34;UBERON:0007811!2.46e-15!86;UBERON:0002791!3.40e-14!29;UBERON:0003528!3.40e-14!29;UBERON:0001893!3.40e-14!29;UBERON:0000956!1.11e-11!21;UBERON:0001869!1.11e-11!21;UBERON:0000203!1.11e-11!21;UBERON:0002619!8.65e-11!17;UBERON:0000468!3.32e-08!333;UBERON:0002021!1.06e-07!10;UBERON:0000411!1.06e-07!10;UBERON:0001950!1.06e-07!10;UBERON:0004111!1.63e-07!122;UBERON:0000475!3.33e-07!200;UBERON:0000025!6.88e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.34e-25,52;UBERON:0005068,1.34e-25,52;UBERON:0006241,1.34e-25,52;UBERON:0007135,1.34e-25,52;UBERON:0000073,7.74e-25,54;UBERON:0003080,4.93e-24,40;UBERON:0000955,5.07e-24,47;UBERON:0006238,5.07e-24,47;UBERON:0001017,1.40e-23,73;UBERON:0002780,1.89e-23,39;UBERON:0001890,1.89e-23,39;UBERON:0006240,1.89e-23,39;UBERON:0002616,3.15e-23,46;UBERON:0001016,2.34e-22,75;UBERON:0002346,1.15e-20,64;UBERON:0003075,1.15e-20,64;UBERON:0007284,1.15e-20,64;UBERON:0003056,1.91e-20,49;UBERON:0010371,1.85e-19,73;UBERON:0004121,4.49e-19,95;UBERON:0000924,4.49e-19,95;UBERON:0006601,4.49e-19,95;UBERON:0002020,5.13e-18,34;UBERON:0003528,1.80e-16,29;UBERON:0002791,1.80e-16,29;UBERON:0001893,1.80e-16,29;UBERON:0000956,6.57e-14,21;UBERON:0001869,6.57e-14,21;UBERON:0000203,6.57e-14,21;UBERON:0002619,1.10e-13,17;UBERON:0010314,6.33e-10,92;UBERON:0002021,1.25e-09,10;UBERON:0000411,1.25e-09,10;UBERON:0001950,1.25e-09,10;UBERON:0000025,2.02e-09,114;UBERON:0004111,6.84e-09,122;UBERON:0001894,6.61e-08,10;UBERON:0006222,6.61e-08,10|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,8.5677611266444,7.97162586204562,1.67983705950435,1.43752564364972,0,0,0,1.54355661621568,0.286533439938757,0,3.43937983461316,2.64495489636016,2.53532561402472,0,0.889294796111139,0,0,0,2.99600110518405,6.91592949578798,2.17748185847803,0.945041568321835,1.47227472945967,1.99955689082663,0.883474163806454,1.95985278743926,2.30029130443767,1.83843757322004,2.20231761998777,0.383062014255563,1.0752457327937,2.37395317914349,2.10421580285542,2.08365348222704,0.837548997004143,1.12552522006336,2.29197371665215,2.35702868378934,2.98980529678116,2.79599168737951,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.867426633830679,0.304465478312141,0.461230994512117,0.452167921657868,1.05829836422134,0.628332956648377,0.494389935468748,0,0,0.647067399789637,0.441683036920787,1.45462575940567,0,1.17112318804619,1.04723353406728,0.255457055208591,0,0,0,2.24685959107234,8.6925114535539,2.1361239859187,2.9550134432687,2.81287003063364,2.28566849015516,3.40706652442291,0.305518091550949,1.7416975885413,0.505445516867349,0.420883711772948,1.69156575851515,0.689706313300419,1.26043490863744,0.90422890701429,0.816437989815934,1.2811372028485,1.12442069471675,0.776110112217047,0.431135985865684,2.08016688184601,3.69497360744293,2.84954452155847,2.78047249225598,1.74126083261083,1.23469281844766,0.796137067273973,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0,0.232533944750408,0,0.350296027101508,0.329119699826961,0.820837320395476,0.810688095458557,0.146199987425332,0,0.268412837520744,1.68231958851302,3.08713837137853,0,0,0.853153002140936,1.62565670302307,2.19074684247559,0.80673409849337,1.11189021922435,0.951128130562796,0,0.494096864172033,0,0.596869416123452,0.58489226135736,0,0.432276099749388,0.597423819763102,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0.775809948670503,0.420814919341911,0.569128834118316,0.885660887877613,0.784993639206874,0.493588655687202,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,9.60716588866344,0.568474235311454,1.95557971730431,1.18821560042632,1.40814148973101,0.837531287209079,2.85652369063216,1.95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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:16526
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:G3X9U8,uniprot:P97438,uniprot:Q6P6P9
|association_with_transcript=-3bp_to_NM_010607,uc011wyj.1_5end
|cluster_id=chr1:191167586..191167628,-
|description=CAGE_peak_1_at_Kcnk2_5end
|id=chr1:191167586..191167628,-
|ontology_enrichment_celltype=CL:0000117!1.32e-07!23;CL:0000337!1.32e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-07,23;CL:0000337,2.22e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!9.77e-22!52;UBERON:0005068!9.77e-22!52;UBERON:0006241!9.77e-22!52;UBERON:0007135!9.77e-22!52;UBERON:0003080!5.24e-20!40;UBERON:0000955!5.55e-20!50;UBERON:0006238!5.55e-20!50;UBERON:0002780!1.46e-19!39;UBERON:0001890!1.46e-19!39;UBERON:0006240!1.46e-19!39;UBERON:0003056!2.07e-19!49;UBERON:0002616!2.27e-19!49;UBERON:0001017!2.41e-19!73;UBERON:0005743!2.41e-19!73;UBERON:0000033!3.47e-19!63;UBERON:0004121!7.88e-19!102;UBERON:0000924!7.88e-19!102;UBERON:0006601!7.88e-19!102;UBERON:0000073!1.52e-18!75;UBERON:0001016!1.52e-18!75;UBERON:0002346!5.40e-18!71;UBERON:0003075!5.40e-18!71;UBERON:0007284!5.40e-18!71;UBERON:0000153!4.74e-17!94;UBERON:0002020!5.66e-16!34;UBERON:0007811!2.46e-15!86;UBERON:0002791!3.40e-14!29;UBERON:0003528!3.40e-14!29;UBERON:0001893!3.40e-14!29;UBERON:0000956!1.11e-11!21;UBERON:0001869!1.11e-11!21;UBERON:0000203!1.11e-11!21;UBERON:0002619!8.65e-11!17;UBERON:0000468!3.32e-08!333;UBERON:0002021!1.06e-07!10;UBERON:0000411!1.06e-07!10;UBERON:0001950!1.06e-07!10;UBERON:0004111!1.63e-07!122;UBERON:0000475!3.33e-07!200;UBERON:0000025!6.88e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.34e-25,52;UBERON:0005068,1.34e-25,52;UBERON:0006241,1.34e-25,52;UBERON:0007135,1.34e-25,52;UBERON:0000073,7.74e-25,54;UBERON:0003080,4.93e-24,40;UBERON:0000955,5.07e-24,47;UBERON:0006238,5.07e-24,47;UBERON:0001017,1.40e-23,73;UBERON:0002780,1.89e-23,39;UBERON:0001890,1.89e-23,39;UBERON:0006240,1.89e-23,39;UBERON:0002616,3.15e-23,46;UBERON:0001016,2.34e-22,75;UBERON:0002346,1.15e-20,64;UBERON:0003075,1.15e-20,64;UBERON:0007284,1.15e-20,64;UBERON:0003056,1.91e-20,49;UBERON:0010371,1.85e-19,73;UBERON:0004121,4.49e-19,95;UBERON:0000924,4.49e-19,95;UBERON:0006601,4.49e-19,95;UBERON:0002020,5.13e-18,34;UBERON:0003528,1.80e-16,29;UBERON:0002791,1.80e-16,29;UBERON:0001893,1.80e-16,29;UBERON:0000956,6.57e-14,21;UBERON:0001869,6.57e-14,21;UBERON:0000203,6.57e-14,21;UBERON:0002619,1.10e-13,17;UBERON:0010314,6.33e-10,92;UBERON:0002021,1.25e-09,10;UBERON:0000411,1.25e-09,10;UBERON:0001950,1.25e-09,10;UBERON:0000025,2.02e-09,114;UBERON:0004111,6.84e-09,122;UBERON:0001894,6.61e-08,10;UBERON:0006222,6.61e-08,10
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,8.5677611266444,7.97162586204562,1.67983705950435,1.43752564364972,0,0,0,1.54355661621568,0.286533439938757,0,3.43937983461316,2.64495489636016,2.53532561402472,0,0.889294796111139,0,0,0,2.99600110518405,6.91592949578798,2.17748185847803,0.945041568321835,1.47227472945967,1.99955689082663,0.883474163806454,1.95985278743926,2.30029130443767,1.83843757322004,2.20231761998777,0.383062014255563,1.0752457327937,2.37395317914349,2.10421580285542,2.08365348222704,0.837548997004143,1.12552522006336,2.29197371665215,2.35702868378934,2.98980529678116,2.79599168737951,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.867426633830679,0.304465478312141,0.461230994512117,0.452167921657868,1.05829836422134,0.628332956648377,0.494389935468748,0,0,0.647067399789637,0.441683036920787,1.45462575940567,0,1.17112318804619,1.04723353406728,0.255457055208591,0,0,0,2.24685959107234,8.6925114535539,2.1361239859187,2.9550134432687,2.81287003063364,2.28566849015516,3.40706652442291,0.305518091550949,1.7416975885413,0.505445516867349,0.420883711772948,1.69156575851515,0.689706313300419,1.26043490863744,0.90422890701429,0.816437989815934,1.2811372028485,1.12442069471675,0.776110112217047,0.431135985865684,2.08016688184601,3.69497360744293,2.84954452155847,2.78047249225598,1.74126083261083,1.23469281844766,0.796137067273973,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0,0.232533944750408,0,0.350296027101508,0.329119699826961,0.820837320395476,0.810688095458557,0.146199987425332,0,0.268412837520744,1.68231958851302,3.08713837137853,0,0,0.853153002140936,1.62565670302307,2.19074684247559,0.80673409849337,1.11189021922435,0.951128130562796,0,0.494096864172033,0,0.596869416123452,0.58489226135736,0,0.432276099749388,0.597423819763102,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0.775809948670503,0.420814919341911,0.569128834118316,0.885660887877613,0.784993639206874,0.493588655687202,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,9.60716588866344,0.568474235311454,1.95557971730431,1.18821560042632,1.40814148973101,0.837531287209079,2.85652369063216,1.95133647857799,0.788175720530955,1.7717175171902,0.797273843287435,2.62181303545181,2.93564469172023,3.47157740595628,0,0,0,0.827810238914197,1.28440471990234,0.468846746368813,0,0,0,0,0,0,0,0,0.404810701674894,0.584511715822624,0,3.21321316421807,6.24536374916382,0.712262414669021,0.162886959353576,1.81467135269789,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,8.5109901438447,1.8006109403131,2.32845630808958,1.50035924522115,3.72414490648775,5.17269571046005,4.93647061806363,3.65357938937519,1.40803024838226,0.42366414172764,1.32317038832977,6.43056386471772,1.13025098687134,1.14594557363496,0.716234064018819,1.96969079694074,0,2.22510362412612,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,1.01659733563424,0.540026704109006,0.418176592028937,0.655087691238533,0.269728692769641,0.247960367176008,0,0.90730481304255,0.621339313086926,0,0.747582730219894,0.827292452285488,0.194451188344048,0.129159823477731,0.337912250981556,0.234714477291508,0.39061315453185,0,0,0,1.26404448251271,1.21635129174099,2.87590680061516,2.5984164595559,1.43221356533985,1.58945083825012,0.721172697119813,2.80610101631697,0.706765149637033,0.457240839929999,0.604957110821043,1.07203668813728,0.673482891482306,1.28564592399726,0.906921534460845,0,0,0,0.965947970160952,1.50145980360946,1.28206136987086,1.71494703263253,1.00314420807073,6.7770221114048,5.06357760157895,4.01026859407578,4.98374228796694,2.74033007908257,3.7769694869485,4.05013500139084,4.5032120322422,5.89085131679466,4.14208249401456,0.93408612825759,3.59122386060928,2.73173769206615,0.972426868273176,0.838452650511929,0.551530525350042,1.11123363900808,1.23621034343337,1.28367683836726,0.758091635291392,1.52087579934144,0.943131706930381,2.52832070168682,1.6646539625266,1.83793500657962,1.90517476513229,1.27472758539341,0.964546102318525,1.64834360321323,1.32479028120958,1.37147700954166,0.70990322463735,1.43061713968393,1.74415699958794,1.88218760830661,1.01537529470012,0.914639864363863,1.05227884575137,2.17286582153379,1.68342681497322,1.77952527186261,1.47756723563345,0.818462086339379,1.70430525304563,2.3148793317737,1.74867404556562,1.87145286756327,0.859484216193193,0.57386499620653,0.882365676478062,0.231867835620421
|short_description=p1@Kcnk2
}}

Revision as of 11:36, 5 August 2015

Short description:p1@Kcnk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kcnk2_5end
Coexpression cluster:NA
Association with transcript: -3bp_to_NM_010607, uc011wyj.1_5end
EntrezGene:16526
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p1@Kcnk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B19.61
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I76.25
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I22.88
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.22e-0723
neuroblast (sensu Vertebrata)2.22e-0723

Uber anatomy
Ontology termp-valuen
neural tube1.34e-2552
neural rod1.34e-2552
future spinal cord1.34e-2552
neural keel1.34e-2552
regional part of nervous system7.74e-2554
anterior neural tube4.93e-2440
brain5.07e-2447
future brain5.07e-2447
central nervous system1.40e-2373
regional part of forebrain1.89e-2339
forebrain1.89e-2339
future forebrain1.89e-2339
regional part of brain3.15e-2346
nervous system2.34e-2275
neurectoderm1.15e-2064
neural plate1.15e-2064
presumptive neural plate1.15e-2064
pre-chordal neural plate1.91e-2049
ecto-epithelium1.85e-1973
ectoderm-derived structure4.49e-1995
ectoderm4.49e-1995
presumptive ectoderm4.49e-1995
gray matter5.13e-1834
brain grey matter1.80e-1629
regional part of telencephalon1.80e-1629
telencephalon1.80e-1629
cerebral cortex6.57e-1421
cerebral hemisphere6.57e-1421
pallium6.57e-1421
regional part of cerebral cortex1.10e-1317
structure with developmental contribution from neural crest6.33e-1092
occipital lobe1.25e-0910
visual cortex1.25e-0910
neocortex1.25e-0910
tube2.02e-09114
anatomical conduit6.84e-09122
diencephalon6.61e-0810
future diencephalon6.61e-0810