FFCP PHASE1:Mm9::chr13:100204419..100204430,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100204419..100204430,-|id=chr13:100204419..100204430,-|ontology_enrichment_celltype=CL:0000540!4.46e-19!33;CL:0000047!4.46e-19!33;CL:0000031!4.46e-19!33;CL:0000404!4.46e-19!33;CL:0000117!2.23e-17!23;CL:0000337!2.23e-17!23;CL:0000393!3.67e-14!39;CL:0000211!3.67e-14!39;CL:0002319!9.97e-13!43;CL:0000221!3.70e-12!44;CL:0000133!3.70e-12!44;CL:0000055!2.77e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.01e-23,23;CL:0000337,8.01e-23,23;CL:0000540,4.95e-15,33;CL:0000047,4.95e-15,33;CL:0000031,4.95e-15,33;CL:0000404,4.95e-15,33;CL:0000393,2.81e-12,39;CL:0000211,2.81e-12,39;CL:0002319,7.18e-11,43;CL:0000221,1.47e-10,44;CL:0000133,1.47e-10,44;CL:0002610,7.99e-10,3;CL:0002609,7.34e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.17e-28!73;UBERON:0005743!5.17e-28!73;UBERON:0000073!1.29e-26!75;UBERON:0001016!1.29e-26!75;UBERON:0004121!1.15e-24!102;UBERON:0000924!1.15e-24!102;UBERON:0006601!1.15e-24!102;UBERON:0002346!6.39e-24!71;UBERON:0003075!6.39e-24!71;UBERON:0007284!6.39e-24!71;UBERON:0000033!1.70e-21!63;UBERON:0001049!2.50e-21!52;UBERON:0005068!2.50e-21!52;UBERON:0006241!2.50e-21!52;UBERON:0007135!2.50e-21!52;UBERON:0000955!1.82e-20!50;UBERON:0006238!1.82e-20!50;UBERON:0002616!5.22e-20!49;UBERON:0003056!4.54e-19!49;UBERON:0002020!5.51e-19!34;UBERON:0003080!1.35e-16!40;UBERON:0002780!4.50e-16!39;UBERON:0001890!4.50e-16!39;UBERON:0006240!4.50e-16!39;UBERON:0002791!4.84e-16!29;UBERON:0003528!4.84e-16!29;UBERON:0001893!4.84e-16!29;UBERON:0007811!6.70e-12!86;UBERON:0000956!1.46e-10!21;UBERON:0001869!1.46e-10!21;UBERON:0000203!1.46e-10!21;UBERON:0000153!2.09e-09!94;UBERON:0002619!6.16e-08!17;UBERON:0002021!6.98e-08!10;UBERON:0000411!6.98e-08!10;UBERON:0001950!6.98e-08!10;UBERON:0000025!3.55e-07!114;UBERON:0002420!7.03e-07!8;UBERON:0007245!7.03e-07!8;UBERON:0010009!7.03e-07!8;UBERON:0010011!7.03e-07!8;UBERON:0000454!7.03e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.46e-29,34;UBERON:0000073,1.12e-28,54;UBERON:0003528,1.13e-27,29;UBERON:0002791,1.13e-27,29;UBERON:0001893,1.13e-27,29;UBERON:0001017,5.94e-26,73;UBERON:0001016,3.99e-25,75;UBERON:0002780,8.15e-25,39;UBERON:0001890,8.15e-25,39;UBERON:0006240,8.15e-25,39;UBERON:0001049,1.42e-24,52;UBERON:0005068,1.42e-24,52;UBERON:0006241,1.42e-24,52;UBERON:0007135,1.42e-24,52;UBERON:0003080,4.29e-24,40;UBERON:0000956,1.18e-22,21;UBERON:0001869,1.18e-22,21;UBERON:0000203,1.18e-22,21;UBERON:0003056,4.27e-21,49;UBERON:0002346,4.67e-21,64;UBERON:0003075,4.67e-21,64;UBERON:0007284,4.67e-21,64;UBERON:0002616,2.00e-20,46;UBERON:0004121,2.04e-20,95;UBERON:0000924,2.04e-20,95;UBERON:0006601,2.04e-20,95;UBERON:0000955,6.64e-20,47;UBERON:0006238,6.64e-20,47;UBERON:0002021,1.38e-19,10;UBERON:0000411,1.38e-19,10;UBERON:0001950,1.38e-19,10;UBERON:0010371,7.01e-18,73;UBERON:0002619,4.83e-17,17;UBERON:0010314,3.28e-13,92;UBERON:0004684,7.99e-10,3;UBERON:0002275,7.99e-10,3;UBERON:0000025,1.02e-08,114;UBERON:0004111,7.63e-08,122|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0.384218305321555,1.8664130215526,1.35005938331691,1.05162480675691,0.285650984403804,0.220868540951614,0.734944795289724,1.0543001812006,0.919218786610021,1.10115880999389,1.78762273319263,2.76491759861238,0.659431438650969,1.55528994124096,0.52091337055676,1.3959149950069,0.56276261003168,1.37518422999129,2.65165726926301,3.70166370077668,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.449371918214468,0.457500602818626,2.63874139437015,0.347648640384553,1.02286182932132,1.24672826735736,1.29793010454206,0,0.124406970610093,0.252722758433675,0,0.520481771850815,0,0.180062129805349,0.753524089178575,1.08858398642125,0.640568601424249,0.749613796477831,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.590292695242212,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0,3.91037527041281,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.80275294993896,0.937693492737625,0,0,0.315508219416257,0,0.215423397732799,0,0.668396022247182,0.283076530788832,0.809621403349789,0.584511715822624,0.790575555893047,0.321321316421807,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0.713475270408282,0.658196082408484,0,0,0,0,0,0,0,0,0.328281799490123,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.39061315453185,0.314578033277133,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,1.6942555278512,3.68260189205742,4.58316410751517,2.23409137046794,1.37016503954128,3.0215755895588,4.05013500139084,0.900642406448441,1.35942722695261,0,1.03787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0,0.320919209591815,0,0,0.377252682772152,0.37456602987953,0.448176066834085,0.287177344778066,0,0.695305955669133,0,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.548783918618318,0,0.135804113845862,0.561142271657738,0.118635018124174,0.394017929502254,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr13:100204419..100204430,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:100204419..100204430,- | |||
|description=CAGE_peak_at_chr13:100204419..100204430,- | |||
|id=chr13:100204419..100204430,- | |||
|ontology_enrichment_celltype=CL:0000540!4.46e-19!33;CL:0000047!4.46e-19!33;CL:0000031!4.46e-19!33;CL:0000404!4.46e-19!33;CL:0000117!2.23e-17!23;CL:0000337!2.23e-17!23;CL:0000393!3.67e-14!39;CL:0000211!3.67e-14!39;CL:0002319!9.97e-13!43;CL:0000221!3.70e-12!44;CL:0000133!3.70e-12!44;CL:0000055!2.77e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.01e-23,23;CL:0000337,8.01e-23,23;CL:0000540,4.95e-15,33;CL:0000047,4.95e-15,33;CL:0000031,4.95e-15,33;CL:0000404,4.95e-15,33;CL:0000393,2.81e-12,39;CL:0000211,2.81e-12,39;CL:0002319,7.18e-11,43;CL:0000221,1.47e-10,44;CL:0000133,1.47e-10,44;CL:0002610,7.99e-10,3;CL:0002609,7.34e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.17e-28!73;UBERON:0005743!5.17e-28!73;UBERON:0000073!1.29e-26!75;UBERON:0001016!1.29e-26!75;UBERON:0004121!1.15e-24!102;UBERON:0000924!1.15e-24!102;UBERON:0006601!1.15e-24!102;UBERON:0002346!6.39e-24!71;UBERON:0003075!6.39e-24!71;UBERON:0007284!6.39e-24!71;UBERON:0000033!1.70e-21!63;UBERON:0001049!2.50e-21!52;UBERON:0005068!2.50e-21!52;UBERON:0006241!2.50e-21!52;UBERON:0007135!2.50e-21!52;UBERON:0000955!1.82e-20!50;UBERON:0006238!1.82e-20!50;UBERON:0002616!5.22e-20!49;UBERON:0003056!4.54e-19!49;UBERON:0002020!5.51e-19!34;UBERON:0003080!1.35e-16!40;UBERON:0002780!4.50e-16!39;UBERON:0001890!4.50e-16!39;UBERON:0006240!4.50e-16!39;UBERON:0002791!4.84e-16!29;UBERON:0003528!4.84e-16!29;UBERON:0001893!4.84e-16!29;UBERON:0007811!6.70e-12!86;UBERON:0000956!1.46e-10!21;UBERON:0001869!1.46e-10!21;UBERON:0000203!1.46e-10!21;UBERON:0000153!2.09e-09!94;UBERON:0002619!6.16e-08!17;UBERON:0002021!6.98e-08!10;UBERON:0000411!6.98e-08!10;UBERON:0001950!6.98e-08!10;UBERON:0000025!3.55e-07!114;UBERON:0002420!7.03e-07!8;UBERON:0007245!7.03e-07!8;UBERON:0010009!7.03e-07!8;UBERON:0010011!7.03e-07!8;UBERON:0000454!7.03e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.46e-29,34;UBERON:0000073,1.12e-28,54;UBERON:0003528,1.13e-27,29;UBERON:0002791,1.13e-27,29;UBERON:0001893,1.13e-27,29;UBERON:0001017,5.94e-26,73;UBERON:0001016,3.99e-25,75;UBERON:0002780,8.15e-25,39;UBERON:0001890,8.15e-25,39;UBERON:0006240,8.15e-25,39;UBERON:0001049,1.42e-24,52;UBERON:0005068,1.42e-24,52;UBERON:0006241,1.42e-24,52;UBERON:0007135,1.42e-24,52;UBERON:0003080,4.29e-24,40;UBERON:0000956,1.18e-22,21;UBERON:0001869,1.18e-22,21;UBERON:0000203,1.18e-22,21;UBERON:0003056,4.27e-21,49;UBERON:0002346,4.67e-21,64;UBERON:0003075,4.67e-21,64;UBERON:0007284,4.67e-21,64;UBERON:0002616,2.00e-20,46;UBERON:0004121,2.04e-20,95;UBERON:0000924,2.04e-20,95;UBERON:0006601,2.04e-20,95;UBERON:0000955,6.64e-20,47;UBERON:0006238,6.64e-20,47;UBERON:0002021,1.38e-19,10;UBERON:0000411,1.38e-19,10;UBERON:0001950,1.38e-19,10;UBERON:0010371,7.01e-18,73;UBERON:0002619,4.83e-17,17;UBERON:0010314,3.28e-13,92;UBERON:0004684,7.99e-10,3;UBERON:0002275,7.99e-10,3;UBERON:0000025,1.02e-08,114;UBERON:0004111,7.63e-08,122 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0.384218305321555,1.8664130215526,1.35005938331691,1.05162480675691,0.285650984403804,0.220868540951614,0.734944795289724,1.0543001812006,0.919218786610021,1.10115880999389,1.78762273319263,2.76491759861238,0.659431438650969,1.55528994124096,0.52091337055676,1.3959149950069,0.56276261003168,1.37518422999129,2.65165726926301,3.70166370077668,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.449371918214468,0.457500602818626,2.63874139437015,0.347648640384553,1.02286182932132,1.24672826735736,1.29793010454206,0,0.124406970610093,0.252722758433675,0,0.520481771850815,0,0.180062129805349,0.753524089178575,1.08858398642125,0.640568601424249,0.749613796477831,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.590292695242212,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0,3.91037527041281,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.80275294993896,0.937693492737625,0,0,0.315508219416257,0,0.215423397732799,0,0.668396022247182,0.283076530788832,0.809621403349789,0.584511715822624,0.790575555893047,0.321321316421807,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0.713475270408282,0.658196082408484,0,0,0,0,0,0,0,0,0.328281799490123,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.39061315453185,0.314578033277133,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,1.6942555278512,3.68260189205742,4.58316410751517,2.23409137046794,1.37016503954128,3.0215755895588,4.05013500139084,0.900642406448441,1.35942722695261,0,1.03787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0,0.320919209591815,0,0,0.377252682772152,0.37456602987953,0.448176066834085,0.287177344778066,0,0.695305955669133,0,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.548783918618318,0,0.135804113845862,0.561142271657738,0.118635018124174,0.394017929502254,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr13:100204419..100204430,- | |||
}} |
Latest revision as of 12:29, 5 August 2015
Short description: | p@chr13:100204419..100204430, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100204419..100204430, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.01e-23 | 23 |
neuroblast (sensu Vertebrata) | 8.01e-23 | 23 |
neuron | 4.95e-15 | 33 |
neuronal stem cell | 4.95e-15 | 33 |
neuroblast | 4.95e-15 | 33 |
electrically signaling cell | 4.95e-15 | 33 |
electrically responsive cell | 2.81e-12 | 39 |
electrically active cell | 2.81e-12 | 39 |
neural cell | 7.18e-11 | 43 |
ectodermal cell | 1.47e-10 | 44 |
neurectodermal cell | 1.47e-10 | 44 |
raphe nuclei neuron | 7.99e-10 | 3 |
neuron of cerebral cortex | 7.34e-08 | 6 |