FFCP PHASE1:Mm9::chr7:85722657..85722714,-: Difference between revisions
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{{FFCP|EntrezGene=18213|HGNC=|MCL_coexpression_id=1|UniProt=Q3TNY3,Q6VNS1|association_with_transcript=9bp_to_NM_008746,NM_182809,uc009hxf.2,uc009hxh.2,uc009hxi.2_5end|description=CAGE_peak_2_at_Ntrk3_5end|id=chr7:85722657..85722714,-|ontology_enrichment_celltype=CL:0000117!4.47e-13!23;CL:0000337!4.47e-13!23;CL:0000540!1.16e-08!33;CL:0000047!1.16e-08!33;CL:0000031!1.16e-08!33;CL:0000404!1.16e-08!33;CL:0002319!2.15e-07!43;CL:0000221!2.37e-07!44;CL:0000133!2.37e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,6.76e-15,23;CL:0000337,6.76e-15,23;CL:0000540,1.06e-07,33;CL:0000047,1.06e-07,33;CL:0000031,1.06e-07,33;CL:0000404,1.06e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.65e-25!52;UBERON:0005068!5.65e-25!52;UBERON:0006241!5.65e-25!52;UBERON:0007135!5.65e-25!52;UBERON:0001017!1.83e-24!73;UBERON:0005743!1.83e-24!73;UBERON:0004121!2.66e-24!102;UBERON:0000924!2.66e-24!102;UBERON:0006601!2.66e-24!102;UBERON:0000955!1.12e-23!50;UBERON:0006238!1.12e-23!50;UBERON:0000073!2.54e-23!75;UBERON:0001016!2.54e-23!75;UBERON:0002616!5.34e-23!49;UBERON:0002346!7.76e-23!71;UBERON:0003075!7.76e-23!71;UBERON:0007284!7.76e-23!71;UBERON:0000033!9.81e-23!63;UBERON:0003080!3.36e-19!40;UBERON:0002020!5.34e-19!34;UBERON:0002780!1.25e-18!39;UBERON:0001890!1.25e-18!39;UBERON:0006240!1.25e-18!39;UBERON:0003056!1.36e-18!49;UBERON:0002791!4.71e-16!29;UBERON:0003528!4.71e-16!29;UBERON:0001893!4.71e-16!29;UBERON:0007811!1.08e-13!86;UBERON:0000153!7.23e-13!94;UBERON:0000956!7.28e-12!21;UBERON:0001869!7.28e-12!21;UBERON:0000203!7.28e-12!21;UBERON:0002619!1.62e-09!17;UBERON:0000468!1.33e-08!333;UBERON:0002021!6.22e-08!10;UBERON:0000411!6.22e-08!10;UBERON:0001950!6.22e-08!10;UBERON:0000025!8.26e-08!114;UBERON:0004111!1.78e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.09e-29,54;UBERON:0001049,2.63e-28,52;UBERON:0005068,2.63e-28,52;UBERON:0006241,2.63e-28,52;UBERON:0007135,2.63e-28,52;UBERON:0010371,4.19e-25,73;UBERON:0001017,5.06e-25,73;UBERON:0002346,7.59e-25,64;UBERON:0003075,7.59e-25,64;UBERON:0007284,7.59e-25,64;UBERON:0000955,7.62e-25,47;UBERON:0006238,7.62e-25,47;UBERON:0002616,4.51e-24,46;UBERON:0001016,1.44e-23,75;UBERON:0004121,1.46e-23,95;UBERON:0000924,1.46e-23,95;UBERON:0006601,1.46e-23,95;UBERON:0003080,6.69e-22,40;UBERON:0002020,1.16e-21,34;UBERON:0002780,3.06e-21,39;UBERON:0001890,3.06e-21,39;UBERON:0006240,3.06e-21,39;UBERON:0003056,6.36e-21,49;UBERON:0003528,3.00e-18,29;UBERON:0002791,3.00e-18,29;UBERON:0001893,3.00e-18,29;UBERON:0010314,2.20e-16,92;UBERON:0000956,2.13e-13,21;UBERON:0001869,2.13e-13,21;UBERON:0000203,2.13e-13,21;UBERON:0002619,1.10e-10,17;UBERON:0002021,6.09e-09,10;UBERON:0000411,6.09e-09,10;UBERON:0001950,6.09e-09,10;UBERON:0003076,7.14e-07,12;UBERON:0003057,7.14e-07,12|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0.703943610758334,0.234064526321993,0,0,0.342401459862411,0.262261207256992,0,0,0,0,0.137114433605739,0,6.37824676133023,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,0.436050312760893,0.219686182734472,1.1665793944457,1.1198913730029,1.43752564364972,0,0.725362142011344,0.336093799142464,0.771778308107841,0.573066879877513,0.515672092277442,14.1621522601718,22.2176211294254,7.60597684207415,0,0.889294796111139,0,0,0,2.09720077362883,1.92109152660777,19.9084055632277,17.1457541681247,19.3498964443271,13.9968982357864,17.8903518170807,15.6788222995141,20.1275489138296,11.9498442259303,15.4162233399144,14.5563565417114,13.8245879930619,12.6610836220986,11.3444678066988,13.5437476344758,7.81712397203867,13.5063026407603,18.0301932376636,27.1058298635774,19.2201769078789,18.4535451367048,0.227178579999552,0.302286240427142,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,1.12674735821344,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0.445326417194474,3.46970653532272,4.26251669636998,1.38369298353635,1.3565037649736,1.99900802130698,0.879666139307728,0.247194967734374,17.0627241165496,0,0.161766849947409,0,0,0,45.3810235367898,41.0515545354372,0,0,0,0,17.0761328921498,29.2800385803921,22.6177833803156,29.3763101124947,24.2929684463814,18.0775598766817,22.5515355664183,6.31404055871961,0.622034853050465,0.505445516867349,3.36706969418358,0,1.14951052216736,0.900310649026746,3.31550599238573,3.46986145671772,2.8185018462667,2.71735001223214,3.88055056108524,0,0.567318240503458,0.879755620819744,1.09597866213787,3.05851974148158,1.74126083261083,1.64625709126355,1.19420560091096,0,0,0,0,0.469052119962192,0.720248245844059,1.42046841351126,0.196764231747404,1.54267112887378,0.697601834251224,0.268273401399619,1.98501082024188,0.987359099480883,1.97000956894914,1.13496333364198,1.16959989940266,0.439100230582101,0.268412837520744,48.1563982211851,40.8531311145759,0,0.264450566663544,1.70630600428187,1.39342003116263,2.19074684247559,1.4117846723634,2.00140239460383,0.760902504450237,0.949058123089023,1.97638745668813,2.01068167040216,1.39269530428806,0.58489226135736,0,0.2161380498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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18213 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TNY3,uniprot:Q6VNS1 | |||
|association_with_transcript=9bp_to_NM_008746,NM_182809,uc009hxf.2,uc009hxh.2,uc009hxi.2_5end | |||
|cluster_id=chr7:85722657..85722714,- | |||
|description=CAGE_peak_2_at_Ntrk3_5end | |||
|id=chr7:85722657..85722714,- | |||
|ontology_enrichment_celltype=CL:0000117!4.47e-13!23;CL:0000337!4.47e-13!23;CL:0000540!1.16e-08!33;CL:0000047!1.16e-08!33;CL:0000031!1.16e-08!33;CL:0000404!1.16e-08!33;CL:0002319!2.15e-07!43;CL:0000221!2.37e-07!44;CL:0000133!2.37e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.76e-15,23;CL:0000337,6.76e-15,23;CL:0000540,1.06e-07,33;CL:0000047,1.06e-07,33;CL:0000031,1.06e-07,33;CL:0000404,1.06e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.65e-25!52;UBERON:0005068!5.65e-25!52;UBERON:0006241!5.65e-25!52;UBERON:0007135!5.65e-25!52;UBERON:0001017!1.83e-24!73;UBERON:0005743!1.83e-24!73;UBERON:0004121!2.66e-24!102;UBERON:0000924!2.66e-24!102;UBERON:0006601!2.66e-24!102;UBERON:0000955!1.12e-23!50;UBERON:0006238!1.12e-23!50;UBERON:0000073!2.54e-23!75;UBERON:0001016!2.54e-23!75;UBERON:0002616!5.34e-23!49;UBERON:0002346!7.76e-23!71;UBERON:0003075!7.76e-23!71;UBERON:0007284!7.76e-23!71;UBERON:0000033!9.81e-23!63;UBERON:0003080!3.36e-19!40;UBERON:0002020!5.34e-19!34;UBERON:0002780!1.25e-18!39;UBERON:0001890!1.25e-18!39;UBERON:0006240!1.25e-18!39;UBERON:0003056!1.36e-18!49;UBERON:0002791!4.71e-16!29;UBERON:0003528!4.71e-16!29;UBERON:0001893!4.71e-16!29;UBERON:0007811!1.08e-13!86;UBERON:0000153!7.23e-13!94;UBERON:0000956!7.28e-12!21;UBERON:0001869!7.28e-12!21;UBERON:0000203!7.28e-12!21;UBERON:0002619!1.62e-09!17;UBERON:0000468!1.33e-08!333;UBERON:0002021!6.22e-08!10;UBERON:0000411!6.22e-08!10;UBERON:0001950!6.22e-08!10;UBERON:0000025!8.26e-08!114;UBERON:0004111!1.78e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.09e-29,54;UBERON:0001049,2.63e-28,52;UBERON:0005068,2.63e-28,52;UBERON:0006241,2.63e-28,52;UBERON:0007135,2.63e-28,52;UBERON:0010371,4.19e-25,73;UBERON:0001017,5.06e-25,73;UBERON:0002346,7.59e-25,64;UBERON:0003075,7.59e-25,64;UBERON:0007284,7.59e-25,64;UBERON:0000955,7.62e-25,47;UBERON:0006238,7.62e-25,47;UBERON:0002616,4.51e-24,46;UBERON:0001016,1.44e-23,75;UBERON:0004121,1.46e-23,95;UBERON:0000924,1.46e-23,95;UBERON:0006601,1.46e-23,95;UBERON:0003080,6.69e-22,40;UBERON:0002020,1.16e-21,34;UBERON:0002780,3.06e-21,39;UBERON:0001890,3.06e-21,39;UBERON:0006240,3.06e-21,39;UBERON:0003056,6.36e-21,49;UBERON:0003528,3.00e-18,29;UBERON:0002791,3.00e-18,29;UBERON:0001893,3.00e-18,29;UBERON:0010314,2.20e-16,92;UBERON:0000956,2.13e-13,21;UBERON:0001869,2.13e-13,21;UBERON:0000203,2.13e-13,21;UBERON:0002619,1.10e-10,17;UBERON:0002021,6.09e-09,10;UBERON:0000411,6.09e-09,10;UBERON:0001950,6.09e-09,10;UBERON:0003076,7.14e-07,12;UBERON:0003057,7.14e-07,12 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0.703943610758334,0.234064526321993,0,0,0.342401459862411,0.262261207256992,0,0,0,0,0.137114433605739,0,6.37824676133023,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,0.436050312760893,0.219686182734472,1.1665793944457,1.1198913730029,1.43752564364972,0,0.725362142011344,0.336093799142464,0.771778308107841,0.573066879877513,0.515672092277442,14.1621522601718,22.2176211294254,7.60597684207415,0,0.889294796111139,0,0,0,2.09720077362883,1.92109152660777,19.9084055632277,17.1457541681247,19.3498964443271,13.9968982357864,17.8903518170807,15.6788222995141,20.1275489138296,11.9498442259303,15.4162233399144,14.5563565417114,13.8245879930619,12.6610836220986,11.3444678066988,13.5437476344758,7.81712397203867,13.5063026407603,18.0301932376636,27.1058298635774,19.2201769078789,18.4535451367048,0.227178579999552,0.302286240427142,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,1.12674735821344,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0.445326417194474,3.46970653532272,4.26251669636998,1.38369298353635,1.3565037649736,1.99900802130698,0.879666139307728,0.247194967734374,17.0627241165496,0,0.161766849947409,0,0,0,45.3810235367898,41.0515545354372,0,0,0,0,17.0761328921498,29.2800385803921,22.6177833803156,29.3763101124947,24.2929684463814,18.0775598766817,22.5515355664183,6.31404055871961,0.622034853050465,0.505445516867349,3.36706969418358,0,1.14951052216736,0.900310649026746,3.31550599238573,3.46986145671772,2.8185018462667,2.71735001223214,3.88055056108524,0,0.567318240503458,0.879755620819744,1.09597866213787,3.05851974148158,1.74126083261083,1.64625709126355,1.19420560091096,0,0,0,0,0.469052119962192,0.720248245844059,1.42046841351126,0.196764231747404,1.54267112887378,0.697601834251224,0.268273401399619,1.98501082024188,0.987359099480883,1.97000956894914,1.13496333364198,1.16959989940266,0.439100230582101,0.268412837520744,48.1563982211851,40.8531311145759,0,0.264450566663544,1.70630600428187,1.39342003116263,2.19074684247559,1.4117846723634,2.00140239460383,0.760902504450237,0.949058123089023,1.97638745668813,2.01068167040216,1.39269530428806,0.58489226135736,0,0.216138049874694,0.398282546508734,1.89667900953082,2.51346727741403,2.25415471346161,2.03651327845314,1.16371492300575,1.26244475802573,0.758838445491087,0.885660887877613,0.31399745568275,0.493588655687202,0,0.667380422864376,0.786235980452812,0,0,0.241177159752417,0.25462585178142,0,0.648540907100142,0,0,0.372140947668503,0,0,0,0,0.739012760666419,2.08440552947533,0.814824882210129,1.18821560042632,0.938760993154008,0.837531287209079,0.952174563544055,0.780534591431195,1.89162172927429,3.5434350343804,3.98636921643718,0.655453258862952,0.690739927463582,1.01254341007058,0,0,2.45882136509518,5.24279817978992,11.8807436590966,12.0728037189969,0,0.252470927204373,0.631016438832513,0.390438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,0.790575555893047,24.4204200480573,0.851640511249612,2.31485284767432,3.4206261464251,2.96946221350564,0,0,0.604647113929502,0.188605079755898,0.590603785761546,1.22974059177571,2.32585463851399,0.727067458955011,0,1.58018378967908,0,0,5.10659408630682,2.34079422240703,3.88076051348264,2.14337035031592,3.72414490648775,5.88617098086833,4.27827453565514,4.26250928760439,0,0,1.10264199027481,0.8244312647074,2.74489525383039,2.29189114726992,2.50681922406587,1.47726809770555,0.874442509889552,13.1651964427462,0.170870880797853,1.44470807574256,0.555583582109135,0,0.136694227721025,0,0,0,0,0,0.632671987162271,2.64315307264903,2.48412283890143,2.09088296014469,2.40198820120795,2.02296519577231,1.40510874733071,0.26175594198403,0,3.72803587852155,0,0.299033092087958,0.330916980914195,0.972255941720238,1.80823752868824,0.675824501963113,0.821500670520278,1.3020438484395,0.524296722128554,0,0,0.632022241256357,2.22997736819181,1.74608627180206,0.389762468933385,0,0.79472541912506,0.360586348559907,0.443068581523732,0.504832249740738,0.914481679859998,1.31074040677893,0.682205165178267,0.0962118416403295,1.05189211963412,0.453460767230423,0,0,0,1.15913756419314,0.187682475451182,0.549454872801795,0.214368379079066,0,28.8023439734704,29.0004898999521,28.6447756719698,28.1839219043648,26.0331357512844,27.9495742034189,26.3258775090404,35.1250538514892,35.345107900768,26.4057758993428,1.03787347584177,4.78829848081237,4.95127456686989,5.59145449257076,2.93458427679175,3.12533964365024,4.22268782823069,4.53277125925567,7.06022261101994,6.82282471762253,6.84394109703647,6.41329560712659,7.21039607518095,7.10679191694049,7.12199815049605,7.1444053692461,6.37363792696705,6.55891349576597,6.59337441285291,6.18235464564469,5.14303878578123,7.27650805253284,7.86839426826159,6.68593516508711,7.43464105281112,6.26148098398406,6.58540702341981,7.3659519202596,4.88894809845102,6.17256498823512,4.38949567059444,4.82671963640261,6.13846564754534,5.57772628269478,4.82266527452853,8.4935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| |||
|short_description=p2@Ntrk3 | |||
}} |
Revision as of 14:35, 5 August 2015
Short description: | p2@Ntrk3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ntrk3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 9bp_to_NM_008746, NM_182809, uc009hxf.2, uc009hxh.2, uc009hxi.2_5end |
EntrezGene: | 18213 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.76e-15 | 23 |
neuroblast (sensu Vertebrata) | 6.76e-15 | 23 |
neuron | 1.06e-07 | 33 |
neuronal stem cell | 1.06e-07 | 33 |
neuroblast | 1.06e-07 | 33 |
electrically signaling cell | 1.06e-07 | 33 |