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FFCP PHASE1:Mm9::chr4:75748748..75748753,-: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=135|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:75748748..75748753,-|id=chr4:75748748..75748753,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.06e-15!71;UBERON:0003075!5.06e-15!71;UBERON:0007284!5.06e-15!71;UBERON:0000025!2.18e-14!114;UBERON:0000955!7.62e-14!50;UBERON:0006238!7.62e-14!50;UBERON:0000033!1.29e-13!63;UBERON:0002616!2.48e-13!49;UBERON:0001049!2.51e-13!52;UBERON:0005068!2.51e-13!52;UBERON:0006241!2.51e-13!52;UBERON:0007135!2.51e-13!52;UBERON:0003056!6.04e-13!49;UBERON:0004111!4.32e-12!122;UBERON:0003080!1.97e-11!40;UBERON:0002780!6.13e-11!39;UBERON:0001890!6.13e-11!39;UBERON:0006240!6.13e-11!39;UBERON:0002020!2.27e-10!34;UBERON:0002791!5.81e-10!29;UBERON:0003528!5.81e-10!29;UBERON:0001893!5.81e-10!29;UBERON:0001017!8.12e-10!73;UBERON:0005743!8.12e-10!73;UBERON:0000468!3.10e-09!333;UBERON:0000073!6.38e-09!75;UBERON:0001016!6.38e-09!75;UBERON:0002021!1.70e-08!10;UBERON:0000411!1.70e-08!10;UBERON:0001950!1.70e-08!10;UBERON:0004121!2.11e-08!102;UBERON:0000924!2.11e-08!102;UBERON:0006601!2.11e-08!102;UBERON:0000922!1.16e-07!328;UBERON:0000956!5.12e-07!21;UBERON:0001869!5.12e-07!21;UBERON:0000203!5.12e-07!21;UBERON:0000475!6.73e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.92e-19,54;UBERON:0001049,2.51e-18,52;UBERON:0005068,2.51e-18,52;UBERON:0006241,2.51e-18,52;UBERON:0007135,2.51e-18,52;UBERON:0002346,7.41e-18,64;UBERON:0003075,7.41e-18,64;UBERON:0007284,7.41e-18,64;UBERON:0000955,2.85e-17,47;UBERON:0006238,2.85e-17,47;UBERON:0002616,1.76e-16,46;UBERON:0003056,4.32e-15,49;UBERON:0003080,3.71e-14,40;UBERON:0002020,3.74e-14,34;UBERON:0001017,3.98e-14,73;UBERON:0000025,4.55e-14,114;UBERON:0010371,4.74e-14,73;UBERON:0001016,2.07e-13,75;UBERON:0002780,2.10e-13,39;UBERON:0001890,2.10e-13,39;UBERON:0006240,2.10e-13,39;UBERON:0003528,2.29e-13,29;UBERON:0002791,2.29e-13,29;UBERON:0001893,2.29e-13,29;UBERON:0002021,4.96e-13,10;UBERON:0000411,4.96e-13,10;UBERON:0001950,4.96e-13,10;UBERON:0010314,6.34e-13,92;UBERON:0004111,4.38e-12,122;UBERON:0004121,1.58e-11,95;UBERON:0000924,1.58e-11,95;UBERON:0006601,1.58e-11,95;UBERON:0000956,3.11e-10,21;UBERON:0001869,3.11e-10,21;UBERON:0000203,3.11e-10,21;UBERON:0002619,7.23e-09,17|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,1.89008313664367,1.26194976810829,0,0.441737081903227,0.979926393719632,0.191690942036473,0,1.10115880999389,1.27687338085188,2.15049146558741,1.05509030184155,0.823388792421687,2.08365348222704,3.35019598801657,2.8138130501584,2.75036845998258,2.06240009831567,2.13557521198654,1.67759501242771,0,0,0,0,0,5.39703191637817,3.89865850468601,0.448026887097336,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,0,0.890652834388949,0.520455980298408,0.608930956624282,0.922461989024234,1.05505848386836,1.64624189989987,0.251333182659351,0,1.3013942122792,0,0.647067399789637,0.883366073841574,1.45462575940567,0,3.22058876712702,3.35114730901528,0,0,0,0,2.24685959107234,2.28750301409313,0.628271760564322,4.69325664519146,5.11430914660661,3.53239675751252,2.43361894601636,0.407357455401265,0.870848794270651,0,0.631325567659422,0.650602214813519,0.229902104433473,0.180062129805349,2.10986744970001,2.04109497453984,1.40925092313335,1.3118241438362,1.81092359517311,0,0.756424320671277,0.175951124163949,0.219195732427575,1.94633074457919,0.696504333044333,1.02891068203972,1.19420560091096,0,0,0,0.621377317606506,2.34526059981096,1.2604344302271,0.473489471170421,0.787056926989615,2.00547246753592,1.39520366850245,0.536546802799238,0.583826711835847,0.658239399653922,0.656669856316381,0.0810688095458557,0.438599962275997,0.439100230582101,0.134206418760372,2.94405927989778,1.23485534855141,0.660837565967596,0,2.98603550749328,1.16118335930219,0.644337306610467,0.403367049246685,0,0.570676878337677,0,1.64698954724011,1.75934646160189,0.198956472041151,0.58489226135736,0,0.216138049874694,0.597423819763102,0.189667900953082,1.48523066392647,0,1.83286195060783,1.35766741017338,0.420814919341911,0.632365371242573,1.47610147979602,1.8839847340965,1.97435462274881,2.07516838961004,0,0,0,0,0,0.25462585178142,0.575392274901621,0.648540907100142,0.823684239564244,4.31304619582064,1.86070473834252,3.43241440426017,1.51547326768267,1.61457672169721,0.964887042726734,0.184753190166605,0,0.814824882210129,0.848725428875941,2.58159273117352,0.167506257441816,0.476087281772027,1.17080188714679,0.788175720530955,4.20782910332672,1.2756381492599,0.655453258862952,1.55416483679306,1.01254341007058,0,0,0,0,2.56880943980467,4.33683240391152,0,0.504941854408746,0.315508219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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=135
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr4:75748748..75748753,-
|description=CAGE_peak_at_chr4:75748748..75748753,-
|id=chr4:75748748..75748753,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.06e-15!71;UBERON:0003075!5.06e-15!71;UBERON:0007284!5.06e-15!71;UBERON:0000025!2.18e-14!114;UBERON:0000955!7.62e-14!50;UBERON:0006238!7.62e-14!50;UBERON:0000033!1.29e-13!63;UBERON:0002616!2.48e-13!49;UBERON:0001049!2.51e-13!52;UBERON:0005068!2.51e-13!52;UBERON:0006241!2.51e-13!52;UBERON:0007135!2.51e-13!52;UBERON:0003056!6.04e-13!49;UBERON:0004111!4.32e-12!122;UBERON:0003080!1.97e-11!40;UBERON:0002780!6.13e-11!39;UBERON:0001890!6.13e-11!39;UBERON:0006240!6.13e-11!39;UBERON:0002020!2.27e-10!34;UBERON:0002791!5.81e-10!29;UBERON:0003528!5.81e-10!29;UBERON:0001893!5.81e-10!29;UBERON:0001017!8.12e-10!73;UBERON:0005743!8.12e-10!73;UBERON:0000468!3.10e-09!333;UBERON:0000073!6.38e-09!75;UBERON:0001016!6.38e-09!75;UBERON:0002021!1.70e-08!10;UBERON:0000411!1.70e-08!10;UBERON:0001950!1.70e-08!10;UBERON:0004121!2.11e-08!102;UBERON:0000924!2.11e-08!102;UBERON:0006601!2.11e-08!102;UBERON:0000922!1.16e-07!328;UBERON:0000956!5.12e-07!21;UBERON:0001869!5.12e-07!21;UBERON:0000203!5.12e-07!21;UBERON:0000475!6.73e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.92e-19,54;UBERON:0001049,2.51e-18,52;UBERON:0005068,2.51e-18,52;UBERON:0006241,2.51e-18,52;UBERON:0007135,2.51e-18,52;UBERON:0002346,7.41e-18,64;UBERON:0003075,7.41e-18,64;UBERON:0007284,7.41e-18,64;UBERON:0000955,2.85e-17,47;UBERON:0006238,2.85e-17,47;UBERON:0002616,1.76e-16,46;UBERON:0003056,4.32e-15,49;UBERON:0003080,3.71e-14,40;UBERON:0002020,3.74e-14,34;UBERON:0001017,3.98e-14,73;UBERON:0000025,4.55e-14,114;UBERON:0010371,4.74e-14,73;UBERON:0001016,2.07e-13,75;UBERON:0002780,2.10e-13,39;UBERON:0001890,2.10e-13,39;UBERON:0006240,2.10e-13,39;UBERON:0003528,2.29e-13,29;UBERON:0002791,2.29e-13,29;UBERON:0001893,2.29e-13,29;UBERON:0002021,4.96e-13,10;UBERON:0000411,4.96e-13,10;UBERON:0001950,4.96e-13,10;UBERON:0010314,6.34e-13,92;UBERON:0004111,4.38e-12,122;UBERON:0004121,1.58e-11,95;UBERON:0000924,1.58e-11,95;UBERON:0006601,1.58e-11,95;UBERON:0000956,3.11e-10,21;UBERON:0001869,3.11e-10,21;UBERON:0000203,3.11e-10,21;UBERON:0002619,7.23e-09,17
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,1.89008313664367,1.26194976810829,0,0.441737081903227,0.979926393719632,0.191690942036473,0,1.10115880999389,1.27687338085188,2.15049146558741,1.05509030184155,0.823388792421687,2.08365348222704,3.35019598801657,2.8138130501584,2.75036845998258,2.06240009831567,2.13557521198654,1.67759501242771,0,0,0,0,0,5.39703191637817,3.89865850468601,0.448026887097336,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,0,0.890652834388949,0.520455980298408,0.608930956624282,0.922461989024234,1.05505848386836,1.64624189989987,0.251333182659351,0,1.3013942122792,0,0.647067399789637,0.883366073841574,1.45462575940567,0,3.22058876712702,3.35114730901528,0,0,0,0,2.24685959107234,2.28750301409313,0.628271760564322,4.69325664519146,5.11430914660661,3.53239675751252,2.43361894601636,0.407357455401265,0.870848794270651,0,0.631325567659422,0.650602214813519,0.229902104433473,0.180062129805349,2.10986744970001,2.04109497453984,1.40925092313335,1.3118241438362,1.81092359517311,0,0.756424320671277,0.175951124163949,0.219195732427575,1.94633074457919,0.696504333044333,1.02891068203972,1.19420560091096,0,0,0,0.621377317606506,2.34526059981096,1.2604344302271,0.473489471170421,0.787056926989615,2.00547246753592,1.39520366850245,0.536546802799238,0.583826711835847,0.658239399653922,0.656669856316381,0.0810688095458557,0.438599962275997,0.439100230582101,0.134206418760372,2.94405927989778,1.23485534855141,0.660837565967596,0,2.98603550749328,1.16118335930219,0.644337306610467,0.403367049246685,0,0.570676878337677,0,1.64698954724011,1.75934646160189,0.198956472041151,0.58489226135736,0,0.216138049874694,0.597423819763102,0.189667900953082,1.48523066392647,0,1.83286195060783,1.35766741017338,0.420814919341911,0.632365371242573,1.47610147979602,1.8839847340965,1.97435462274881,2.07516838961004,0,0,0,0,0,0.25462585178142,0.575392274901621,0.648540907100142,0.823684239564244,4.31304619582064,1.86070473834252,3.43241440426017,1.51547326768267,1.61457672169721,0.964887042726734,0.184753190166605,0,0.814824882210129,0.848725428875941,2.58159273117352,0.167506257441816,0.476087281772027,1.17080188714679,0.788175720530955,4.20782910332672,1.2756381492599,0.655453258862952,1.55416483679306,1.01254341007058,0,0,0,0,2.56880943980467,4.33683240391152,0,0.504941854408746,0.315508219416257,0.390438744296638,0,0,0,0,0,0.584511715822624,2.37172666767914,2.24924921495265,0.425820255624806,0.178065603667255,0.488660878060728,0.164970122972535,0,1.45668381692989,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0,1.44048875225048,0.258717367565509,1.28602221018955,0.354680467284547,1.07021290561242,0.987294123612726,0.608929898229199,0,0,0,0,0.484393280087717,0.120625849856312,0.238744688006273,0,0,2.59595422814714,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,2.86401185404534,0.158167996790568,0,0.648032044930808,0.836353184057875,0.87345025498471,0.674321731924103,0.247960367176008,0.785267825952089,1.8146096260851,0,0,0.598066184175915,0.330916980914195,0.388902376688095,0.774958940866387,1.520605129417,0.821500670520278,0.2604087696879,0.419437377702843,0.724752362478018,0.864090018773596,0,0.810900861160657,0.410843828659309,0,0,0,0.240390899039938,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0.643105137237198,0,5.0827665835536,8.74617949363636,8.59343270159095,23.3720327987415,4.7955776383945,5.2877572817279,6.07520250208625,6.75481804836331,4.53142408984205,3.62432218226274,0.415149390336707,0,0.341467211508268,0.243106717068294,0.419226325255965,0.183843508450014,0.888986911206461,0.206035057238894,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,1.03005658216871,0.832326981263301,0.918967503289812,0,1.39061191133827,0.964546102318525,0,0.883193520806384,2.05721551431249,1.4198064492747,2.38436189947321,1.0174249164263,0.752875043322645,1.94613598150856,0.73171189149109,0.526139422875686,1.08643291076689,0,0.949080144993393,0.689531376628944,0,0.77468420592983,0.771626443924566,0.249810577937946,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0
|short_description=p@chr4:75748748..75748753,-
}}

Latest revision as of 17:35, 5 August 2015

Short description:p@chr4:75748748..75748753, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:75748748..75748753, -
Coexpression cluster:MCL_coexpression_mm9:135
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr4:75748748..75748753-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.92e-1954
neural tube2.51e-1852
neural rod2.51e-1852
future spinal cord2.51e-1852
neural keel2.51e-1852
neurectoderm7.41e-1864
neural plate7.41e-1864
presumptive neural plate7.41e-1864
brain2.85e-1747
future brain2.85e-1747
regional part of brain1.76e-1646
pre-chordal neural plate4.32e-1549
anterior neural tube3.71e-1440
gray matter3.74e-1434
central nervous system3.98e-1473
tube4.55e-14114
ecto-epithelium4.74e-1473
nervous system2.07e-1375
regional part of forebrain2.10e-1339
forebrain2.10e-1339
future forebrain2.10e-1339
brain grey matter2.29e-1329
regional part of telencephalon2.29e-1329
telencephalon2.29e-1329
occipital lobe4.96e-1310
visual cortex4.96e-1310
neocortex4.96e-1310
structure with developmental contribution from neural crest6.34e-1392
anatomical conduit4.38e-12122
ectoderm-derived structure1.58e-1195
ectoderm1.58e-1195
presumptive ectoderm1.58e-1195
cerebral cortex3.11e-1021
cerebral hemisphere3.11e-1021
pallium3.11e-1021
regional part of cerebral cortex7.23e-0917
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