FFCP PHASE1:Mm9::chr9:97933609..97933626,-: Difference between revisions
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{{FFCP|EntrezGene=64085|HGNC=|MCL_coexpression_id=1|UniProt=Q9ER65|association_with_transcript=-9bp_to_ENSMUST00000035027_5end|description=CAGE_peak_1_at_Clstn2_5end|id=chr9:97933609..97933626,-|ontology_enrichment_celltype=CL:0000117!8.57e-13!23;CL:0000337!8.57e-13!23;CL:0000540!5.14e-08!33;CL:0000047!5.14e-08!33;CL:0000031!5.14e-08!33;CL:0000404!5.14e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.59e-13,23;CL:0000337,1.59e-13,23;CL:0000540,4.98e-08,33;CL:0000047,4.98e-08,33;CL:0000031,4.98e-08,33;CL:0000404,4.98e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.41e-23!52;UBERON:0005068!6.41e-23!52;UBERON:0006241!6.41e-23!52;UBERON:0007135!6.41e-23!52;UBERON:0002346!9.92e-23!71;UBERON:0003075!9.92e-23!71;UBERON:0007284!9.92e-23!71;UBERON:0000955!1.20e-21!50;UBERON:0006238!1.20e-21!50;UBERON:0000033!3.45e-21!63;UBERON:0002616!5.76e-21!49;UBERON:0001017!7.11e-20!73;UBERON:0005743!7.11e-20!73;UBERON:0003056!1.05e-19!49;UBERON:0000073!7.20e-19!75;UBERON:0001016!7.20e-19!75;UBERON:0003080!7.34e-19!40;UBERON:0002780!1.96e-18!39;UBERON:0001890!1.96e-18!39;UBERON:0006240!1.96e-18!39;UBERON:0002020!3.12e-18!34;UBERON:0004121!5.94e-18!102;UBERON:0000924!5.94e-18!102;UBERON:0006601!5.94e-18!102;UBERON:0002791!5.10e-15!29;UBERON:0003528!5.10e-15!29;UBERON:0001893!5.10e-15!29;UBERON:0000025!4.17e-12!114;UBERON:0004111!1.26e-11!122;UBERON:0000956!2.56e-11!21;UBERON:0001869!2.56e-11!21;UBERON:0000203!2.56e-11!21;UBERON:0000468!1.01e-10!333;UBERON:0000153!1.95e-09!94;UBERON:0002619!4.93e-09!17;UBERON:0007811!1.05e-08!86;UBERON:0000922!3.69e-08!328;UBERON:0002021!2.03e-07!10;UBERON:0000411!2.03e-07!10;UBERON:0001950!2.03e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.81e-26,54;UBERON:0002346,8.21e-25,64;UBERON:0003075,8.21e-25,64;UBERON:0007284,8.21e-25,64;UBERON:0001049,1.97e-24,52;UBERON:0005068,1.97e-24,52;UBERON:0006241,1.97e-24,52;UBERON:0007135,1.97e-24,52;UBERON:0010371,5.61e-22,73;UBERON:0000955,5.03e-21,47;UBERON:0006238,5.03e-21,47;UBERON:0003056,6.86e-21,49;UBERON:0002616,2.59e-20,46;UBERON:0001017,4.85e-20,73;UBERON:0003080,5.45e-20,40;UBERON:0002780,1.55e-19,39;UBERON:0001890,1.55e-19,39;UBERON:0006240,1.55e-19,39;UBERON:0002020,2.54e-19,34;UBERON:0001016,1.27e-18,75;UBERON:0010314,1.18e-17,92;UBERON:0004121,4.70e-17,95;UBERON:0000924,4.70e-17,95;UBERON:0006601,4.70e-17,95;UBERON:0003528,6.76e-16,29;UBERON:0002791,6.76e-16,29;UBERON:0001893,6.76e-16,29;UBERON:0000956,5.92e-12,21;UBERON:0001869,5.92e-12,21;UBERON:0000203,5.92e-12,21;UBERON:0000025,2.84e-11,114;UBERON:0004111,9.70e-11,122;UBERON:0002619,1.60e-09,17;UBERON:0002021,8.37e-08,10;UBERON:0000411,8.37e-08,10;UBERON:0001950,8.37e-08,10;UBERON:0000922,1.31e-07,320|phase1_expression=5.60520964866779,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,10.5453679787327,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,1.75748946187577,2.52758868796568,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,9.71119012126069,15.340738398889,8.23980824558033,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,30.6921252433094,33.616478644591,31.3384192413559,31.4216082844184,26.5042249141936,9.92175473641128,11.1180746381154,23.8996884518605,29.731287869835,28.9850257453376,37.6336006477797,14.1118327871307,15.0039735507952,10.4182674111352,22.3346399201105,33.2029939918691,44.1586936074981,35.9446874277875,33.7420883493874,35.4158947068071,0.530083353332288,0.453429360640713,1.44932244350839,0.860423876981386,0,0.539703191637817,0,0,1.26399978118577,0,0,0,2.39433813620357,0,0,0,0,0,0,1.59857431606684,0,4.15637989381509,7.11289839741157,3.04465478312141,2.07553947530453,1.95939432718409,2.70454026412121,2.89033160058254,0.741584903203122,0.86759614151947,0,1.94120219936891,1.98757366614354,0.484875253135222,0,30.1564220921894,30.9981126083913,0.255457055208591,0,0,0,13.6309481858389,13.7250180845588,10.0523481690292,23.8139318663419,41.1701886301832,22.4411088124325,22.8760180925538,6.92507674182151,1.36847667671102,0.252722758433675,2.31486041475121,3.77349284591841,7.35686734187113,6.66229880279792,5.72678307775717,8.98081788797528,6.66191345481219,5.528401749024,11.1242449417777,6.03590380211958,10.7790465695657,18.8267702855425,7.01426343768239,8.34141747676794,1.39300866608867,3.49829631893504,6.56813080501028,0,0,0,4.14251545071004,3.28336483973535,2.88099298337624,2.84093682702252,1.37734962223183,0.771335564436891,0.697601834251224,0.536546802799238,1.05088808130453,2.13927804887525,2.46251196118643,1.78351381000883,0.584799949701329,1.53685080703735,2.01309628140558,48.9975580154416,53.0987799877108,0,0.528901133327089,6.39864751605702,4.18026009348789,1.80414445850931,1.21010114774006,1.77902435075896,1.52180500890047,1.42358718463353,0.988193728344065,2.26201687920243,1.39269530428806,1.36474860983384,0.898819408654221,0.21613804987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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:64085 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9ER65 | |||
|association_with_transcript=-9bp_to_ENSMUST00000035027_5end | |||
|cluster_id=chr9:97933609..97933626,- | |||
|description=CAGE_peak_1_at_Clstn2_5end | |||
|id=chr9:97933609..97933626,- | |||
|ontology_enrichment_celltype=CL:0000117!8.57e-13!23;CL:0000337!8.57e-13!23;CL:0000540!5.14e-08!33;CL:0000047!5.14e-08!33;CL:0000031!5.14e-08!33;CL:0000404!5.14e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.59e-13,23;CL:0000337,1.59e-13,23;CL:0000540,4.98e-08,33;CL:0000047,4.98e-08,33;CL:0000031,4.98e-08,33;CL:0000404,4.98e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.41e-23!52;UBERON:0005068!6.41e-23!52;UBERON:0006241!6.41e-23!52;UBERON:0007135!6.41e-23!52;UBERON:0002346!9.92e-23!71;UBERON:0003075!9.92e-23!71;UBERON:0007284!9.92e-23!71;UBERON:0000955!1.20e-21!50;UBERON:0006238!1.20e-21!50;UBERON:0000033!3.45e-21!63;UBERON:0002616!5.76e-21!49;UBERON:0001017!7.11e-20!73;UBERON:0005743!7.11e-20!73;UBERON:0003056!1.05e-19!49;UBERON:0000073!7.20e-19!75;UBERON:0001016!7.20e-19!75;UBERON:0003080!7.34e-19!40;UBERON:0002780!1.96e-18!39;UBERON:0001890!1.96e-18!39;UBERON:0006240!1.96e-18!39;UBERON:0002020!3.12e-18!34;UBERON:0004121!5.94e-18!102;UBERON:0000924!5.94e-18!102;UBERON:0006601!5.94e-18!102;UBERON:0002791!5.10e-15!29;UBERON:0003528!5.10e-15!29;UBERON:0001893!5.10e-15!29;UBERON:0000025!4.17e-12!114;UBERON:0004111!1.26e-11!122;UBERON:0000956!2.56e-11!21;UBERON:0001869!2.56e-11!21;UBERON:0000203!2.56e-11!21;UBERON:0000468!1.01e-10!333;UBERON:0000153!1.95e-09!94;UBERON:0002619!4.93e-09!17;UBERON:0007811!1.05e-08!86;UBERON:0000922!3.69e-08!328;UBERON:0002021!2.03e-07!10;UBERON:0000411!2.03e-07!10;UBERON:0001950!2.03e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.81e-26,54;UBERON:0002346,8.21e-25,64;UBERON:0003075,8.21e-25,64;UBERON:0007284,8.21e-25,64;UBERON:0001049,1.97e-24,52;UBERON:0005068,1.97e-24,52;UBERON:0006241,1.97e-24,52;UBERON:0007135,1.97e-24,52;UBERON:0010371,5.61e-22,73;UBERON:0000955,5.03e-21,47;UBERON:0006238,5.03e-21,47;UBERON:0003056,6.86e-21,49;UBERON:0002616,2.59e-20,46;UBERON:0001017,4.85e-20,73;UBERON:0003080,5.45e-20,40;UBERON:0002780,1.55e-19,39;UBERON:0001890,1.55e-19,39;UBERON:0006240,1.55e-19,39;UBERON:0002020,2.54e-19,34;UBERON:0001016,1.27e-18,75;UBERON:0010314,1.18e-17,92;UBERON:0004121,4.70e-17,95;UBERON:0000924,4.70e-17,95;UBERON:0006601,4.70e-17,95;UBERON:0003528,6.76e-16,29;UBERON:0002791,6.76e-16,29;UBERON:0001893,6.76e-16,29;UBERON:0000956,5.92e-12,21;UBERON:0001869,5.92e-12,21;UBERON:0000203,5.92e-12,21;UBERON:0000025,2.84e-11,114;UBERON:0004111,9.70e-11,122;UBERON:0002619,1.60e-09,17;UBERON:0002021,8.37e-08,10;UBERON:0000411,8.37e-08,10;UBERON:0001950,8.37e-08,10;UBERON:0000922,1.31e-07,320 | |||
|phase1_expression=5.60520964866779,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,10.5453679787327,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,1.75748946187577,2.52758868796568,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,9.71119012126069,15.340738398889,8.23980824558033,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,30.6921252433094,33.616478644591,31.3384192413559,31.4216082844184,26.5042249141936,9.92175473641128,11.1180746381154,23.8996884518605,29.731287869835,28.9850257453376,37.6336006477797,14.1118327871307,15.0039735507952,10.4182674111352,22.3346399201105,33.2029939918691,44.1586936074981,35.9446874277875,33.7420883493874,35.4158947068071,0.530083353332288,0.453429360640713,1.44932244350839,0.860423876981386,0,0.539703191637817,0,0,1.26399978118577,0,0,0,2.39433813620357,0,0,0,0,0,0,1.59857431606684,0,4.15637989381509,7.11289839741157,3.04465478312141,2.07553947530453,1.95939432718409,2.70454026412121,2.89033160058254,0.741584903203122,0.86759614151947,0,1.94120219936891,1.98757366614354,0.484875253135222,0,30.1564220921894,30.9981126083913,0.255457055208591,0,0,0,13.6309481858389,13.7250180845588,10.0523481690292,23.8139318663419,41.1701886301832,22.4411088124325,22.8760180925538,6.92507674182151,1.36847667671102,0.252722758433675,2.31486041475121,3.77349284591841,7.35686734187113,6.66229880279792,5.72678307775717,8.98081788797528,6.66191345481219,5.528401749024,11.1242449417777,6.03590380211958,10.7790465695657,18.8267702855425,7.01426343768239,8.34141747676794,1.39300866608867,3.49829631893504,6.56813080501028,0,0,0,4.14251545071004,3.28336483973535,2.88099298337624,2.84093682702252,1.37734962223183,0.771335564436891,0.697601834251224,0.536546802799238,1.05088808130453,2.13927804887525,2.46251196118643,1.78351381000883,0.584799949701329,1.53685080703735,2.01309628140558,48.9975580154416,53.0987799877108,0,0.528901133327089,6.39864751605702,4.18026009348789,1.80414445850931,1.21010114774006,1.77902435075896,1.52180500890047,1.42358718463353,0.988193728344065,2.26201687920243,1.39269530428806,1.36474860983384,0.898819408654221,0.216138049874694,1.1948476395262,3.41402221715547,6.85491075658373,4.50830942692322,4.2766778847516,4.07300223052014,4.06787755363848,9.54871710576285,2.06654207171443,2.511979645462,0.987177311374404,0.296452627087149,2.00214126859313,0.589676985339609,0.224862112384854,0,0.241177159752417,1.52775511068852,1.72617682470486,0.162135226775035,1.09824565275233,0,2.97712758134803,2.49630138491648,0.252578877947112,0.179397413521912,0.964887042726734,10.3461786493299,7.01118223550794,5.37784422258685,5.7713329163564,6.80601720036656,11.7254380209271,15.4728366575909,17.9522956029175,26.6403393539463,31.6694506197748,31.09367988821,23.2685906896348,24.3485824430913,14.1756077409881,0,0,0.491764273019036,0.551873492609465,21.5137790583641,20.1604100938589,0,2.27223834483936,1.26203287766503,2.73307121007647,2.80050417052639,0,0.891194696329576,0.566153061577665,0,0.584511715822624,1.18586333383957,33.7387382242897,7.38088443082997,4.80777129901589,5.21238269931443,3.79431282836832,0,1.21390318077491,0.906970670894253,0.377210159511796,0.295301892880773,0.922305443831782,0.775284879504663,0,0.712994756769443,0,0,0,5.10659408630682,8.64293251350289,5.17434735131018,10.2881776815164,18.0887038315119,16.7666688545946,19.7458824722545,14.0053876592716,0.704015124191131,0.42366414172764,1.32317038832977,0.32977250588296,3.55221738730992,3.49814964583304,3.10368094408155,2.62625439592098,0.874442509889552,20.5822085231666,0.683483523191411,7.63631411463923,8.33375373163703,5.83942216714542,0.820165366326151,2.28778173206523,0,0.139951452323658,0,0,4.27053591334533,3.45643094115643,4.64422965533745,5.43629569637619,4.58561383866973,3.37160865962052,5.95104881222419,2.6175594198403,0.648074866458964,0,0,2.0932316446157,2.97825282822776,1.94451188344048,2.0665571756437,2.36538575687089,3.28600268208111,3.25510962109875,5.03324853243412,0.724752362478018,0.864090018773596,0,1.82452693761148,0.821687657318618,0.649604114888975,1.07416017400489,0.596044064343795,0.721172697119813,0.295379054349154,0.201932899896295,0.15241361331,0.100826185136841,0.0974578807397524,0.192423683280659,0,1.36038230169127,0.443971906748129,0.269141569828427,0,0.772758376128762,0.93841237725591,3.47988086107804,5.35920947697665,5.01572104035363,38.4031252979605,36.8260189205741,37.8111038870002,19.4194096048367,31.5137959094495,30.215755895588,35.1011700120539,29.7211994127986,24.469690085147,40.385304316642,3.32119512269365,9.97562183502578,12.1220860085435,9.48116196566347,4.61148957781561,5.69914876195044,6.44515510624684,7.0051919461224,10.9112531261217,7.32821914115013,7.85785829659743,9.80856975207596,6.64854703036165,8.1311943554184,7.75378830900779,8.57328644309533,10.1978206831473,7.33055037762079,6.59337441285291,12.0703114510206,7.20025430009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| |||
|short_description=p1@Clstn2 | |||
}} |
Revision as of 19:56, 5 August 2015
Short description: | p1@Clstn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Clstn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -9bp_to_ENSMUST00000035027_5end |
EntrezGene: | 64085 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.59e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.59e-13 | 23 |
neuron | 4.98e-08 | 33 |
neuronal stem cell | 4.98e-08 | 33 |
neuroblast | 4.98e-08 | 33 |
electrically signaling cell | 4.98e-08 | 33 |