FFCP PHASE1:Mm9::chr18:52688196..52688217,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1719|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:52688196..52688217,-|id=chr18:52688196..52688217,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,4.42e-15,6;CL:0000187,4.42e-15,6;CL:0000056,4.42e-15,6;CL:0000222,8.41e-13,7;CL:0000355,9.24e-10,9;CL:0002494,1.62e-08,3;CL:0000737,1.62e-08,3;CL:0000746,1.62e-08,3;CL:0000513,1.62e-08,3;CL:0000192,3.48e-08,3;CL:0000359,3.48e-08,3;CL:0002539,3.48e-08,3;CL:0000514,3.48e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!9.19e-07!14;UBERON:0000117!9.19e-07!14;UBERON:0000171!9.19e-07!14;UBERON:0000170!9.19e-07!14;UBERON:0005597!9.19e-07!14;UBERON:0000118!9.19e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.24e-10,9;UBERON:0002036,9.24e-10,9;UBERON:0002385,9.24e-10,9;UBERON:0000486,9.24e-10,9;UBERON:0007503,9.24e-10,9;UBERON:0001015,9.24e-10,9;UBERON:0002329,9.24e-10,9;UBERON:0003082,9.24e-10,9;UBERON:0003059,9.24e-10,9;UBERON:0007282,9.24e-10,9;UBERON:0004290,9.24e-10,9;UBERON:0009618,9.24e-10,9;UBERON:0002048,8.53e-09,14;UBERON:0000117,8.53e-09,14;UBERON:0000171,8.53e-09,14;UBERON:0000170,8.53e-09,14;UBERON:0005597,8.53e-09,14;UBERON:0000118,8.53e-09,14;UBERON:0000383,1.07e-08,10;UBERON:0001135,3.48e-08,3;UBERON:0004237,3.48e-08,3;UBERON:0004695,3.48e-08,3;UBERON:0002111,3.48e-08,3;UBERON:0004178,3.48e-08,3;UBERON:0007524,7.94e-08,11;UBERON:0003077,7.94e-08,11;UBERON:0007285,7.94e-08,11;UBERON:0005153,5.20e-07,17;UBERON:0005178,5.20e-07,17;UBERON:0005181,5.20e-07,17;UBERON:0002224,5.20e-07,17;UBERON:0000915,5.20e-07,17;UBERON:0008947,5.20e-07,17;UBERON:0003258,5.20e-07,17|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,3.04130793658544,3.12029478674859,0,0.218025156380447,0.659058548203415,1.36100929351998,0.419959264876088,0,0,0,0,7.46052364504246,6.5902691185914,5.15672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,0.377857800533928,0,0,0,0,0,0,0,7.49893419343454,5.97507810586598,3.88673531961374,0,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0,0,0,0,0,1.52232739156071,0.461230994512117,0,0.23517741427141,0,0,0.289198713839823,0,1.45590164952668,1.10420759230197,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.746441823660558,0,0,1.56144531555244,1.14951052216736,1.80062129805349,0.60281927134286,0.680364991513279,0.2562274405697,0.468508622798644,0.258703370739016,0,0.945530400839096,1.05570674498369,1.53437012699302,1.94633074457919,0,1.4404749548556,0,0,0,0,0.207125772535502,0,0.540186184383045,0.23674473558521,0,0.462801338662135,0.232533944750408,0,0.116765342367169,0.493679549740441,0.164167464079095,0,0,0.219550115291051,0.268412837520744,0,0,0,0,0,0.232236671860439,0.128867461322093,0.80673409849337,0,0,0.474529061544512,0.329397909448022,0.502670417600539,0,0,0,0.432276099749388,0,0.189667900953082,0.685491075658373,1.1270773567308,0.610953983535943,0.193952487167626,0.561086559122548,0.379419222745544,0.295220295959204,0.31399745568275,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,1.62964976442026,2.37643120085263,1.87752198630802,1.00503754465089,1.19021820443007,1.75620283072019,0.472905432318573,1.10732344824387,1.59454768657487,0,0.863424909329478,0.578596234326046,0,0,0.491764273019036,0,0,0.117211686592203,7.70494243270374,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0,0.325773918707152,0.329940245945071,0,0.728341908464944,0,0.565815239267694,0.590603785761546,0,0.516856586336442,0.727067458955011,0,0,0,0,0,0.18006109403131,0.646793418913773,0.643011105094777,0.532020700926821,0.891844088010353,0.164549020602121,0.913394847343798,0,0,0,0,1.77610869365496,0.844380948994182,0,0.164140899745061,0,0,0,0.206386867963223,0.555583582109135,0,0,0.228778173206523,0,0,0,0,0,1.01659733563424,0.324016022465404,0.836353184057875,0.87345025498471,1.88810084938749,0.247960367176008,0.785267825952089,0,0,0,0,0.165458490457098,0.583353565032143,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.386379188064381,0.563047426353546,1.09890974560359,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.59609949360412,0.512200817262403,0.972426868273176,0.838452650511929,0.919217542250071,0.666740183404846,0,0.320919209591815,1.26348605881899,0.25347929989024,0.565879024158229,0.561849044819294,0.448176066834085,0.402048282689293,1.42888107384922,0.347652977834566,0.38581844092741,0,0.588795680537589,0.685738504770831,0.177475806159338,0.953744759789284,0.436039249896986,0.376437521661322,0.507687647350059,0.548783918618318,0.789209134313529,0.271608227691724,0,0.593175090620871,0.29551344712669,1.63692417267876,0.309873682371932,0.964533054905707,0.249810577937946,0.935726433781634,0.859484216193193,0.956441660344217,1.10295709559758,0.231867835620421|short_description=p@chr18:52688196..52688217,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1719 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:52688196..52688217,- | |||
|description=CAGE_peak_at_chr18:52688196..52688217,- | |||
|id=chr18:52688196..52688217,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.42e-15,6;CL:0000187,4.42e-15,6;CL:0000056,4.42e-15,6;CL:0000222,8.41e-13,7;CL:0000355,9.24e-10,9;CL:0002494,1.62e-08,3;CL:0000737,1.62e-08,3;CL:0000746,1.62e-08,3;CL:0000513,1.62e-08,3;CL:0000192,3.48e-08,3;CL:0000359,3.48e-08,3;CL:0002539,3.48e-08,3;CL:0000514,3.48e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!9.19e-07!14;UBERON:0000117!9.19e-07!14;UBERON:0000171!9.19e-07!14;UBERON:0000170!9.19e-07!14;UBERON:0005597!9.19e-07!14;UBERON:0000118!9.19e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.24e-10,9;UBERON:0002036,9.24e-10,9;UBERON:0002385,9.24e-10,9;UBERON:0000486,9.24e-10,9;UBERON:0007503,9.24e-10,9;UBERON:0001015,9.24e-10,9;UBERON:0002329,9.24e-10,9;UBERON:0003082,9.24e-10,9;UBERON:0003059,9.24e-10,9;UBERON:0007282,9.24e-10,9;UBERON:0004290,9.24e-10,9;UBERON:0009618,9.24e-10,9;UBERON:0002048,8.53e-09,14;UBERON:0000117,8.53e-09,14;UBERON:0000171,8.53e-09,14;UBERON:0000170,8.53e-09,14;UBERON:0005597,8.53e-09,14;UBERON:0000118,8.53e-09,14;UBERON:0000383,1.07e-08,10;UBERON:0001135,3.48e-08,3;UBERON:0004237,3.48e-08,3;UBERON:0004695,3.48e-08,3;UBERON:0002111,3.48e-08,3;UBERON:0004178,3.48e-08,3;UBERON:0007524,7.94e-08,11;UBERON:0003077,7.94e-08,11;UBERON:0007285,7.94e-08,11;UBERON:0005153,5.20e-07,17;UBERON:0005178,5.20e-07,17;UBERON:0005181,5.20e-07,17;UBERON:0002224,5.20e-07,17;UBERON:0000915,5.20e-07,17;UBERON:0008947,5.20e-07,17;UBERON:0003258,5.20e-07,17 | |||
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,3.04130793658544,3.12029478674859,0,0.218025156380447,0.659058548203415,1.36100929351998,0.419959264876088,0,0,0,0,7.46052364504246,6.5902691185914,5.15672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,0.377857800533928,0,0,0,0,0,0,0,7.49893419343454,5.97507810586598,3.88673531961374,0,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0,0,0,0,0,1.52232739156071,0.461230994512117,0,0.23517741427141,0,0,0.289198713839823,0,1.45590164952668,1.10420759230197,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.746441823660558,0,0,1.56144531555244,1.14951052216736,1.80062129805349,0.60281927134286,0.680364991513279,0.2562274405697,0.468508622798644,0.258703370739016,0,0.945530400839096,1.05570674498369,1.53437012699302,1.94633074457919,0,1.4404749548556,0,0,0,0,0.207125772535502,0,0.540186184383045,0.23674473558521,0,0.462801338662135,0.232533944750408,0,0.116765342367169,0.493679549740441,0.164167464079095,0,0,0.219550115291051,0.268412837520744,0,0,0,0,0,0.232236671860439,0.128867461322093,0.80673409849337,0,0,0.474529061544512,0.329397909448022,0.502670417600539,0,0,0,0.432276099749388,0,0.189667900953082,0.685491075658373,1.1270773567308,0.610953983535943,0.193952487167626,0.561086559122548,0.379419222745544,0.295220295959204,0.31399745568275,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,1.62964976442026,2.37643120085263,1.87752198630802,1.00503754465089,1.19021820443007,1.75620283072019,0.472905432318573,1.10732344824387,1.59454768657487,0,0.863424909329478,0.578596234326046,0,0,0.491764273019036,0,0,0.117211686592203,7.70494243270374,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0,0.325773918707152,0.329940245945071,0,0.728341908464944,0,0.565815239267694,0.590603785761546,0,0.516856586336442,0.727067458955011,0,0,0,0,0,0.18006109403131,0.646793418913773,0.643011105094777,0.532020700926821,0.891844088010353,0.164549020602121,0.913394847343798,0,0,0,0,1.77610869365496,0.844380948994182,0,0.164140899745061,0,0,0,0.206386867963223,0.555583582109135,0,0,0.228778173206523,0,0,0,0,0,1.01659733563424,0.324016022465404,0.836353184057875,0.87345025498471,1.88810084938749,0.247960367176008,0.785267825952089,0,0,0,0,0.165458490457098,0.583353565032143,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.386379188064381,0.563047426353546,1.09890974560359,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.59609949360412,0.512200817262403,0.972426868273176,0.838452650511929,0.919217542250071,0.666740183404846,0,0.320919209591815,1.26348605881899,0.25347929989024,0.565879024158229,0.561849044819294,0.448176066834085,0.402048282689293,1.42888107384922,0.347652977834566,0.38581844092741,0,0.588795680537589,0.685738504770831,0.177475806159338,0.953744759789284,0.436039249896986,0.376437521661322,0.507687647350059,0.548783918618318,0.789209134313529,0.271608227691724,0,0.593175090620871,0.29551344712669,1.63692417267876,0.309873682371932,0.964533054905707,0.249810577937946,0.935726433781634,0.859484216193193,0.956441660344217,1.10295709559758,0.231867835620421 | |||
|short_description=p@chr18:52688196..52688217,- | |||
}} |
Latest revision as of 20:59, 5 August 2015
Short description: | p@chr18:52688196..52688217, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:52688196..52688217, - |
Coexpression cluster: | MCL_coexpression_mm9:1719 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.42e-15 | 6 |
muscle cell | 4.42e-15 | 6 |
myoblast | 4.42e-15 | 6 |
mesodermal cell | 8.41e-13 | 7 |
multi-potent skeletal muscle stem cell | 9.24e-10 | 9 |
cardiocyte | 1.62e-08 | 3 |
striated muscle cell | 1.62e-08 | 3 |
cardiac muscle cell | 1.62e-08 | 3 |
cardiac muscle myoblast | 1.62e-08 | 3 |
smooth muscle cell | 3.48e-08 | 3 |
vascular associated smooth muscle cell | 3.48e-08 | 3 |
aortic smooth muscle cell | 3.48e-08 | 3 |
smooth muscle myoblast | 3.48e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 9.24e-10 | 9 |
striated muscle tissue | 9.24e-10 | 9 |
muscle tissue | 9.24e-10 | 9 |
multilaminar epithelium | 9.24e-10 | 9 |
epithelial vesicle | 9.24e-10 | 9 |
musculature | 9.24e-10 | 9 |
somite | 9.24e-10 | 9 |
myotome | 9.24e-10 | 9 |
presomitic mesoderm | 9.24e-10 | 9 |
presumptive segmental plate | 9.24e-10 | 9 |
dermomyotome | 9.24e-10 | 9 |
trunk paraxial mesoderm | 9.24e-10 | 9 |
lung | 8.53e-09 | 14 |
respiratory tube | 8.53e-09 | 14 |
respiration organ | 8.53e-09 | 14 |
pair of lungs | 8.53e-09 | 14 |
lung primordium | 8.53e-09 | 14 |
lung bud | 8.53e-09 | 14 |
musculature of body | 1.07e-08 | 10 |
smooth muscle tissue | 3.48e-08 | 3 |
blood vessel smooth muscle | 3.48e-08 | 3 |
arterial system smooth muscle | 3.48e-08 | 3 |
artery smooth muscle tissue | 3.48e-08 | 3 |
aorta smooth muscle tissue | 3.48e-08 | 3 |
dense mesenchyme tissue | 7.94e-08 | 11 |
paraxial mesoderm | 7.94e-08 | 11 |
presumptive paraxial mesoderm | 7.94e-08 | 11 |
epithelial bud | 5.20e-07 | 17 |
thoracic cavity element | 5.20e-07 | 17 |
thoracic segment organ | 5.20e-07 | 17 |
thoracic cavity | 5.20e-07 | 17 |
thoracic segment of trunk | 5.20e-07 | 17 |
respiratory primordium | 5.20e-07 | 17 |
endoderm of foregut | 5.20e-07 | 17 |