FFCP PHASE1:Mm9::chrX:133365683..133365695,+: Difference between revisions
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{{FFCP|EntrezGene=18823|HGNC=|MCL_coexpression_id=212|UniProt=|association_with_transcript=-5bp_to_ENSMUST00000125644_5end|description=CAGE_peak_12_at_Plp1_5end|id=chrX:133365683..133365695,+|ontology_enrichment_celltype=CL:0002610!7.05e-09!3;CL:0000221!9.15e-09!44;CL:0000133!9.15e-09!44;CL:0000540!3.70e-08!33;CL:0000047!3.70e-08!33;CL:0000031!3.70e-08!33;CL:0000404!3.70e-08!33;CL:0002614!5.02e-08!3;CL:0002319!7.91e-08!43;CL:0000630!9.11e-07!3|ontology_enrichment_celltype_v019_2=CL:0002610,2.82e-23,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.71e-27!75;UBERON:0001016!6.71e-27!75;UBERON:0001017!3.77e-24!73;UBERON:0005743!3.77e-24!73;UBERON:0004121!4.01e-22!102;UBERON:0000924!4.01e-22!102;UBERON:0006601!4.01e-22!102;UBERON:0000955!2.74e-21!50;UBERON:0006238!2.74e-21!50;UBERON:0002616!1.06e-19!49;UBERON:0000033!6.92e-19!63;UBERON:0001049!4.52e-16!52;UBERON:0005068!4.52e-16!52;UBERON:0006241!4.52e-16!52;UBERON:0007135!4.52e-16!52;UBERON:0002298!4.19e-15!6;UBERON:0002346!2.48e-14!71;UBERON:0003075!2.48e-14!71;UBERON:0007284!2.48e-14!71;UBERON:0007811!3.07e-12!86;UBERON:0000153!1.07e-10!94;UBERON:0003080!2.09e-10!40;UBERON:0002950!2.59e-10!4;UBERON:0001891!2.59e-10!4;UBERON:0009616!2.59e-10!4;UBERON:0002791!1.82e-09!29;UBERON:0003528!1.82e-09!29;UBERON:0001893!1.82e-09!29;UBERON:0002780!3.70e-09!39;UBERON:0001890!3.70e-09!39;UBERON:0006240!3.70e-09!39;UBERON:0002020!4.00e-09!34;UBERON:0000010!4.08e-09!11;UBERON:0003056!4.68e-09!49;UBERON:0004684!7.05e-09!3;UBERON:0002275!7.05e-09!3;UBERON:0002021!2.71e-08!10;UBERON:0000411!2.71e-08!10;UBERON:0001950!2.71e-08!10;UBERON:0002038!5.02e-08!3;UBERON:0002308!5.02e-08!3;UBERON:0009663!5.02e-08!3;UBERON:0009661!5.02e-08!3;UBERON:0006331!5.02e-08!3;UBERON:0000125!5.02e-08!3;UBERON:0003076!6.29e-07!12;UBERON:0003057!6.29e-07!12;UBERON:0004733!7.18e-07!6;UBERON:0004732!7.18e-07!6;UBERON:0002028!7.18e-07!6;UBERON:0007277!7.18e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.82e-23,3;UBERON:0002275,2.82e-23,3;UBERON:0001896,5.77e-16,2;UBERON:0002298,5.77e-16,2;UBERON:0005290,5.77e-16,2;UBERON:0010096,5.77e-16,2;UBERON:0000073,1.44e-15,54;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0001049,1.28e-10,52;UBERON:0005068,1.28e-10,52;UBERON:0006241,1.28e-10,52;UBERON:0007135,1.28e-10,52;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002616,1.62e-09,46;UBERON:0000955,2.67e-09,47;UBERON:0006238,2.67e-09,47;UBERON:0002259,1.74e-08,1;UBERON:0002314,1.74e-08,1;UBERON:0004061,1.74e-08,1;UBERON:0006777,1.74e-08,1;UBERON:0005882,1.74e-08,1;UBERON:0002346,1.77e-08,64;UBERON:0003075,1.77e-08,64;UBERON:0007284,1.77e-08,64;UBERON:0002950,2.46e-08,4;UBERON:0001891,2.46e-08,4;UBERON:0009616,2.46e-08,4;UBERON:0010286,2.46e-08,4;UBERON:0010371,2.50e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50579404996943,2.68143409978894,1.53606533256243,0,0,0,0.558365998002762,0.56276261003168,3.81995619442025,0,0.427115042397309,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.19832511523858,0.915001205637253,0,0.347648640384553,0.255715457330331,1.24672826735736,1.1356888414743,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,4.45404409050372,0,0,0.631016438832513,0,0.430846795465598,0,0.668396022247182,0,0.404810701674894,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.68741272937475,0,0,0,0,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p12@Plp1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18823 | |||
|HGNC= | |||
|MCL_coexpression_id=212 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENSMUST00000125644_5end | |||
|cluster_id=chrX:133365683..133365695,+ | |||
|description=CAGE_peak_12_at_Plp1_5end | |||
|id=chrX:133365683..133365695,+ | |||
|ontology_enrichment_celltype=CL:0002610!7.05e-09!3;CL:0000221!9.15e-09!44;CL:0000133!9.15e-09!44;CL:0000540!3.70e-08!33;CL:0000047!3.70e-08!33;CL:0000031!3.70e-08!33;CL:0000404!3.70e-08!33;CL:0002614!5.02e-08!3;CL:0002319!7.91e-08!43;CL:0000630!9.11e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.82e-23,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.71e-27!75;UBERON:0001016!6.71e-27!75;UBERON:0001017!3.77e-24!73;UBERON:0005743!3.77e-24!73;UBERON:0004121!4.01e-22!102;UBERON:0000924!4.01e-22!102;UBERON:0006601!4.01e-22!102;UBERON:0000955!2.74e-21!50;UBERON:0006238!2.74e-21!50;UBERON:0002616!1.06e-19!49;UBERON:0000033!6.92e-19!63;UBERON:0001049!4.52e-16!52;UBERON:0005068!4.52e-16!52;UBERON:0006241!4.52e-16!52;UBERON:0007135!4.52e-16!52;UBERON:0002298!4.19e-15!6;UBERON:0002346!2.48e-14!71;UBERON:0003075!2.48e-14!71;UBERON:0007284!2.48e-14!71;UBERON:0007811!3.07e-12!86;UBERON:0000153!1.07e-10!94;UBERON:0003080!2.09e-10!40;UBERON:0002950!2.59e-10!4;UBERON:0001891!2.59e-10!4;UBERON:0009616!2.59e-10!4;UBERON:0002791!1.82e-09!29;UBERON:0003528!1.82e-09!29;UBERON:0001893!1.82e-09!29;UBERON:0002780!3.70e-09!39;UBERON:0001890!3.70e-09!39;UBERON:0006240!3.70e-09!39;UBERON:0002020!4.00e-09!34;UBERON:0000010!4.08e-09!11;UBERON:0003056!4.68e-09!49;UBERON:0004684!7.05e-09!3;UBERON:0002275!7.05e-09!3;UBERON:0002021!2.71e-08!10;UBERON:0000411!2.71e-08!10;UBERON:0001950!2.71e-08!10;UBERON:0002038!5.02e-08!3;UBERON:0002308!5.02e-08!3;UBERON:0009663!5.02e-08!3;UBERON:0009661!5.02e-08!3;UBERON:0006331!5.02e-08!3;UBERON:0000125!5.02e-08!3;UBERON:0003076!6.29e-07!12;UBERON:0003057!6.29e-07!12;UBERON:0004733!7.18e-07!6;UBERON:0004732!7.18e-07!6;UBERON:0002028!7.18e-07!6;UBERON:0007277!7.18e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.82e-23,3;UBERON:0002275,2.82e-23,3;UBERON:0001896,5.77e-16,2;UBERON:0002298,5.77e-16,2;UBERON:0005290,5.77e-16,2;UBERON:0010096,5.77e-16,2;UBERON:0000073,1.44e-15,54;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0001049,1.28e-10,52;UBERON:0005068,1.28e-10,52;UBERON:0006241,1.28e-10,52;UBERON:0007135,1.28e-10,52;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002616,1.62e-09,46;UBERON:0000955,2.67e-09,47;UBERON:0006238,2.67e-09,47;UBERON:0002259,1.74e-08,1;UBERON:0002314,1.74e-08,1;UBERON:0004061,1.74e-08,1;UBERON:0006777,1.74e-08,1;UBERON:0005882,1.74e-08,1;UBERON:0002346,1.77e-08,64;UBERON:0003075,1.77e-08,64;UBERON:0007284,1.77e-08,64;UBERON:0002950,2.46e-08,4;UBERON:0001891,2.46e-08,4;UBERON:0009616,2.46e-08,4;UBERON:0010286,2.46e-08,4;UBERON:0010371,2.50e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50579404996943,2.68143409978894,1.53606533256243,0,0,0,0.558365998002762,0.56276261003168,3.81995619442025,0,0.427115042397309,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.19832511523858,0.915001205637253,0,0.347648640384553,0.255715457330331,1.24672826735736,1.1356888414743,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,4.45404409050372,0,0,0.631016438832513,0,0.430846795465598,0,0.668396022247182,0,0.404810701674894,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.68741272937475,0,0,0,0,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@Plp1 | |||
}} |
Revision as of 00:23, 6 August 2015
Short description: | p12@Plp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Plp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:212 |
Association with transcript: | -5bp_to_ENSMUST00000125644_5end |
EntrezGene: | 18823 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.82e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.82e-23 | 3 |
reticular formation | 2.82e-23 | 3 |
medulla oblongata | 5.77e-16 | 2 |
brainstem | 5.77e-16 | 2 |
myelencephalon | 5.77e-16 | 2 |
future myelencephalon | 5.77e-16 | 2 |
regional part of nervous system | 1.44e-15 | 54 |
central nervous system | 1.35e-13 | 73 |
nervous system | 3.30e-13 | 75 |
neural tube | 1.28e-10 | 52 |
neural rod | 1.28e-10 | 52 |
future spinal cord | 1.28e-10 | 52 |
neural keel | 1.28e-10 | 52 |
ectoderm-derived structure | 3.22e-10 | 95 |
ectoderm | 3.22e-10 | 95 |
presumptive ectoderm | 3.22e-10 | 95 |
regional part of brain | 1.62e-09 | 46 |
brain | 2.67e-09 | 47 |
future brain | 2.67e-09 | 47 |
corpora quadrigemina | 1.74e-08 | 1 |
midbrain tectum | 1.74e-08 | 1 |
neural tube mantle layer | 1.74e-08 | 1 |
tectal plate | 1.74e-08 | 1 |
neural tube alar plate | 1.74e-08 | 1 |
neurectoderm | 1.77e-08 | 64 |
neural plate | 1.77e-08 | 64 |
presumptive neural plate | 1.77e-08 | 64 |
regional part of midbrain | 2.46e-08 | 4 |
midbrain | 2.46e-08 | 4 |
presumptive midbrain | 2.46e-08 | 4 |
midbrain neural tube | 2.46e-08 | 4 |
ecto-epithelium | 2.50e-07 | 73 |