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Coexpression cluster:C4590: Difference between revisions

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|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0003081!3.37e-29!216;UBERON:0004535!6.09e-23!110;UBERON:0000055!1.75e-22!69;UBERON:0001009!1.22e-21!113;UBERON:0002049!5.80e-21!79;UBERON:0007798!5.80e-21!79;UBERON:0001981!4.38e-20!60;UBERON:0007500!4.38e-20!60;UBERON:0004537!4.38e-20!60;UBERON:0006965!4.38e-20!60;UBERON:0004872!1.44e-17!84;UBERON:0001637!1.83e-16!42;UBERON:0003509!1.83e-16!42;UBERON:0004572!1.83e-16!42;UBERON:0002204!8.10e-14!167;UBERON:0002193!3.59e-13!112;UBERON:0004573!5.29e-13!33;UBERON:0004571!5.29e-13!33;UBERON:0000926!7.03e-12!448;UBERON:0004120!7.03e-12!448;UBERON:0006603!7.03e-12!448;UBERON:0002390!1.81e-10!102;UBERON:0003061!1.81e-10!102;UBERON:0003914!7.08e-10!118;UBERON:0001986!4.13e-09!18;UBERON:0004638!4.13e-09!18;UBERON:0004852!4.13e-09!18;UBERON:0000947!7.78e-09!21;UBERON:0010191!7.78e-09!21;UBERON:0002371!1.44e-08!80;UBERON:0004765!2.87e-08!101;UBERON:0001434!2.87e-08!101;UBERON:0000486!3.95e-08!82;UBERON:0001474!4.25e-08!86;UBERON:0000487!1.60e-07!22;UBERON:0006914!3.99e-07!25;UBERON:0000914!5.19e-07!83;UBERON:0002329!5.19e-07!83;UBERON:0003077!5.19e-07!83;UBERON:0003059!5.19e-07!83;UBERON:0007282!5.19e-07!83;UBERON:0009618!5.19e-07!83;UBERON:0007285!5.19e-07!83;UBERON:0004290!7.82e-07!70;UBERON:0002405!8.28e-07!115
|ontology_enrichment_uberon=UBERON:0003081!3.37e-29!216;UBERON:0004535!6.09e-23!110;UBERON:0000055!1.75e-22!69;UBERON:0001009!1.22e-21!113;UBERON:0002049!5.80e-21!79;UBERON:0007798!5.80e-21!79;UBERON:0001981!4.38e-20!60;UBERON:0007500!4.38e-20!60;UBERON:0004537!4.38e-20!60;UBERON:0006965!4.38e-20!60;UBERON:0004872!1.44e-17!84;UBERON:0001637!1.83e-16!42;UBERON:0003509!1.83e-16!42;UBERON:0004572!1.83e-16!42;UBERON:0002204!8.10e-14!167;UBERON:0002193!3.59e-13!112;UBERON:0004573!5.29e-13!33;UBERON:0004571!5.29e-13!33;UBERON:0000926!7.03e-12!448;UBERON:0004120!7.03e-12!448;UBERON:0006603!7.03e-12!448;UBERON:0002390!1.81e-10!102;UBERON:0003061!1.81e-10!102;UBERON:0003914!7.08e-10!118;UBERON:0001986!4.13e-09!18;UBERON:0004638!4.13e-09!18;UBERON:0004852!4.13e-09!18;UBERON:0000947!7.78e-09!21;UBERON:0010191!7.78e-09!21;UBERON:0002371!1.44e-08!80;UBERON:0004765!2.87e-08!101;UBERON:0001434!2.87e-08!101;UBERON:0000486!3.95e-08!82;UBERON:0001474!4.25e-08!86;UBERON:0000487!1.60e-07!22;UBERON:0006914!3.99e-07!25;UBERON:0000914!5.19e-07!83;UBERON:0002329!5.19e-07!83;UBERON:0003077!5.19e-07!83;UBERON:0003059!5.19e-07!83;UBERON:0007282!5.19e-07!83;UBERON:0009618!5.19e-07!83;UBERON:0007285!5.19e-07!83;UBERON:0004290!7.82e-07!70;UBERON:0002405!8.28e-07!115
|tf_chipseq_enrich=CCNT2#905;3:6.33620157696263:0.00393075003576489:0.0190985625952663!CTBP2#1488;3:62.7170003393281:4.049570681927e-06:0.00013045438385249!EBF1#1879;3:8.906466846569:0.0014152328356098:0.00918731365727576!EGR1#1958;3:4.98817909481014:0.00805648813738344:0.0322231757268761!ETS1#2113;3:9.72876092220234:0.00108584009258484:0.00764899861253661!SIN3A#25942;3:5.40888472681514:0.00631896197799152:0.0278094505085945!SMARCB1#6598;3:18.2527157811574:0.00016439776067989:0.00203889534825401!ZBTB7A#51341;3:7.3519093078759:0.00251625586028227:0.0140825918113724!ZNF263#10127;3:8.22184163701068:0.00179904392556587:0.0110038271474187
|tfbs_overrepresentation=0.147255,0.0586687,0.716932,0.0477154,0.199763,0.287811,0.0430074,0.414564,0.03272,0.0257057,0.139423,0.225367,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,0.143747,0.0933697,0.00169471,0.114046,0.0180314,0.208242,0.0665252,0.0844722,0.324808,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.0102981,0.184019,0.120917,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.0929951,0.198787,0.0384161,0.107455,0.212709,0.0783235,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.352278,0.0600088,0.0860723,0.167053,0.378921,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.0472875,0.251834,0.064341,0.209032,0.241734,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.58489,0.153631,0.0927458,0.27413,0.0574857,0.276221,0.141874,0.0370665,0.219088,0.0409286,0.0669887,0.338096,0.144217,0.0400492,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,0.013844,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.46397,0.0541353,0.0799324,0.090079,0.140334,0.181817,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.187297,0.00788672,0.228812,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.000239533,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.00360981,0.27358,0.15185,0.206299,0.178359,0.0458667,0.104357,0.121154,0.1129,0.312578,0.169057,0.0142864,0.100942,0.062995,0.10299,0.14193,0.37245,0.15606,0.161026,0.0738599,0.126611,0.138852,0.085973,0.060453,0.059896,0.0538541,0.000150753,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.214803,0.182472,0.348993,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.372804,0.000292777,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.0121776,0.0619218,0.1751,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.278352,0.063292,0.254773,0.446759,0.0865903,0.0380459,0.130174,0.584917,0.713218,0.0199061,0.635872,0.051522,0.00879988,0.0853552,0.335423,0.629514,0.261553,0.118991,0.373681,0.309233,0.49143,6.23425e-05,0.395854,0.329568,0.53472,0.248224,0.271958,0.292154,0.405773,0.39729,0.217139,0.00244849,0.187251,0.362792,0.181715,0.423979,0.109988,0.330894,0.218329,0.427027,0.376924,0.463191,0.280025,0.528324,0.168255,0.0792797,0.101703,0.484505,0.253571,0.276829,0.301787,0.141124,0.0565541,0.223503,0.503224,0.603208,0.283727,0.314747,0.0116619,0.291709,0.448095,0.0115542,0.0175396,0.292835,0.137839,0.439556,0.373868,0.056723,0.608919,0.18237,0.346458,0.0964442,0.0512465,0.275351,0.236471,0.185661,0.346319,0.535598,0.270984,0.0179843,0.503058,0.163222,0.522083,0.00314692,0.281576,0.472384,0.163244,0.0670502,0.0730934,0.184794,0.596648,0.762864,0.581837,0.412837,0.671377,0.546839,0.551561,0.120021,0.218623,0.312808,0.032738,0.0451077,0.0747529,0.229003,0.650179,0.589326,0.0338328,0.294698,0.34331,0.477304,0.289204,0.327108,0.683186,0.278044,0.085507,0.428671,0.228096,0.00847033,0.19763,0.15631,0.567452,0.421464,0.48267,0.104399,0.00654277,0.0150702,0.335105,0.144809,0.145539,0.385517,0.376191,0.447325,0.459928,0.252232,0.152681,0.0465712,0.137098,0.0369524,0.134788,0.0985856,0.00133722,0.293698,0.284593,0.343734,0.306556,0.305777,0.601433,0.503082,0.522888,0.00488238,0.262537,0.359455,0.226257,0.405955,0.41707,0.363685,0.464871,0.166672,0.0228979,0.525396,0.0905337,0.437176,0.269226,0.339277,0.0479524,0.281425,0.141758,0.124432,0.520495,0.159617,0.238587,0.0799758,0.232251,0.189515,0.0891382,0.0595618,0.524997,0.625309,0.347298,0.182325,0.00966846,0.475069,0.0158269,0.273024,0.262389,0.316179,0.0697683,0.0556835,0.192544,0.0779981,0.0575676,0.144322,0.223391,0.203656,0.116981,0.441735,0.191777,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.273326,0.0627924,0.0842821,0.0179103,0.303939,0.0434097,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.111277,0.026047,0.332809,0.19559,0.132201,0.188694,0.0481795,0.199971,0.016022,0.127758,0.175785,0.184486,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.00594521,0.0043762,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.0235128,0.153187,0.0797897,0.0974211,0.160149,0.123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526,0.0906475,0.0558058,0.28262,0.517717,0.137332,0.0145999,0.0656973,0.211746,0.220538,0.0801488,0.0757897,0.161801,0.193215,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.370421,0.0330727,0.00956472,0.219556,0.0394698,0.0596469,0.419264,0.122476,0.108872,0.11002,0.26144,0.0286025,0.190156,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.217069,0.190048,0.131088,0.394069,0.0306378,0.286988,0.0761239,0.172491,0.0818785,0.182701,0.335058,0.147698,0.141463,0.167267,0.140622,0.0889592,0.309588,0.00502301,0.0473033,0.094881,0.445524,0.132886,0.0774373,0.109194,0.128564,0.131452,0.00681584,0.0226843,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.144075,0.0340203,0.0741807,0.277091,0.00049486,0.655293,0.21727,0.00514993,0.000310064,0.192475,0.177967,0.0465298,0.057571,0.047591,0.00174134,0.0608699,0.175319,0.0505407,0.0713214,0.223874,0.291114,0.0355833,0.125606,0.175094,0.000919297,0.0611073,0.206454,0.218192,0.108277,0.0673484,0.00613985,0.0494066,0.0958493,0.00171529,0.0755808,0.045654,0.110216,0.070276,0.226171,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.234298,0.0759837,0.286863,0.152372,0.194941,0.0257725,0.101607,0.327067,0.172982,0.340936,0.151597,0.0626744,0.191335,0.148574,0.000797393,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.170295,0.193653,0.137219,0.228144,0.00326415,0.288096,0.11903,0.0838874,0.0622625,0.113145,0.112651,0.186638,0.174776,0.0948451,0.264079,0.249049,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.184948,0.156261,0.311847,0.511859,0.0590944,0.247324,0.178389,0.218229,0.231073,0.407281,6.78596e-05,0.0360851,0.0168763,0.131093,0.0434602,0.00935312,0.103051,0.36927,0.449036,0.407369,0.231447,0.18653,0.43956,0.37006,0.42622,0.448797,0.197484,0.396996,0.0107863,0.0966095,0.381071,0.057779,0.643768,0.432035,0.366326,0.390366,0.48809,0.50058,0.117158,0.0391928,0.000322406,0.0572701,0.227104,0.518585,0.250246,0.38649,0.284625,0.504757,0.55194,0.375373,0.28907,0.164197,0.462688,0.287881,0.0556235,0.478174,0.00846715,0.000498078,0.258219,0.119142,0.243383,5.59455e-07,0.390974,0.0115792,0.000194132,0.161598,0.751174,0.277094,0.496032,0.0239796,0.37357,8.87042e-08,4.38605e-07,3.25586e-05,0.0132585,5.84732e-08,0.20342,8.73915e-05,0.20558,0.300504,0.25656,0.425963,0.349197,0.383291,0.156104,0.141318,0.411941,0.0961477,0.314438,0.354789,0.000835245,0.230581,0.120226,0.28424,2.54652e-05,0.00677385,0.181415,0.00475227,0.00465874,0.00047615,0.408413,0.516511,0.322213,0.0234043,0.33942,0.0156581,0.387276,0.169614,0.481611,0.537348,0.222037,0.416621,0.416292,0.462712,0.0457685,0.215157,0.204817,0.452428,0.138871,3.08861e-07,0.166905,0.19783,0.0833851,0.316453,0.48065,0.175199,0.332919,0.373557,0.523625,0.0980968,0.0111982,0.534741,0.39088,0.0109626,0.236011,0.203486,0.273398,0.0816179,0.4466,0.351067,0.275347,0.0830022,0.305885,0.241132,9.35975e-06,0.00623664,0.303709,0.15059,0.386538,0.159081,0.250964,0.383276,0.457886,0.0344603,0.220231,0.00608438,0.196976,0.191517,0.463751,0.0145214,0.307334,0.0246928,0.283463,0.0102434,0.135386,0.399569,0.273281,0.368095,0.275089,0.384593,0.0283414,0.0740334,0.339729,0.197805,0.24107,0.387069,0.332774,0.52832,0.299887,0.634365,0.00170684,0.17639,0.0779009,0.276869,0.205298,0.0337138,0.18966,0.258854,0.188263,0.0719199,0.264884,0.162568,0.19104,0.163057,0.219428,0.208013,0.0900729,0.0953646,0.166124,0.252184,0.378361,0.0358457,0.20753,0.447185,0.179412,0.193601,0.220904,0.222977,0.341681,0.310674,0.21801,0.198614,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.179889,0.226869,0.27872,0.0855609,0.131118,0.20837,0.247588,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.0139199,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.350452,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.158479,0.220319,0.195218,0.124213,0.259632,0.30793,0.180606,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.258496,0.261744,0.203781,0.21382,0.207559,0.141867,0.193031,0.249101,0.115972,0.224568,0.246105,0.173026,0.200432,0.000508432,0.197112,0.240478,0.156465,0.13108,0.00350063,0.222798,0.172134,0.176789,0.0969345,0.202137,0.310405,0.280943,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.0577193,0.261724,0.211332,0.0012829,0.0297055,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.295769,0.286691,0.347036,0.141729,0.263159,0.255956,0.200105,0.227491,0.29837,0.0352561,0.177664,0.28365,0.264413,0.131761,0.0136582,0.206239,0.19924,0.28689,0.236464,0.325148,0.115817,0.0257187,0.223831,0.11528,0.194982,0.190993,0.281727,0.283218,0.249955,0.164638,0.224257,0.0935776,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.316866,0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}}
}}

Revision as of 14:33, 5 September 2012


Full id: C4590_Neutrophils_Eosinophils_Whole_embryonic_osteosarcoma_Fibroblast_CD14



Phase1 CAGE Peaks

Hg19::chr6:30654342..30654353,-p11@PPP1R18
Hg19::chr6:30654376..30654395,-p5@PPP1R18
Hg19::chr6:30654401..30654477,-p1@PPP1R18


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data


No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data


No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>


Cell Type
Ontology termp-valuen
somatic cell1.04e-22591
CD14-positive, CD16-negative classical monocyte1.14e-1542
mesodermal cell2.26e-15119
classical monocyte3.34e-1345
endothelial cell3.43e-1235
myeloid leukocyte3.49e-1276
native cell5.03e-12722
animal cell7.01e-12679
eukaryotic cell7.01e-12679
somatic stem cell2.61e-11436
multi fate stem cell4.36e-11430
endothelial cell of vascular tree8.77e-1124
meso-epithelial cell2.52e-1044
vascular associated smooth muscle cell4.51e-1032
stem cell7.67e-10444
monopoietic cell1.14e-0963
monocyte1.14e-0963
monoblast1.14e-0963
promonocyte1.14e-0963
non-terminally differentiated cell1.39e-09180
macrophage dendritic cell progenitor1.65e-0965
smooth muscle cell2.15e-0942
smooth muscle myoblast2.15e-0942
blood vessel endothelial cell4.13e-0918
embryonic blood vessel endothelial progenitor cell4.13e-0918
granulocyte monocyte progenitor cell6.18e-0971
lining cell6.47e-0957
barrier cell6.47e-0957
myeloid lineage restricted progenitor cell3.85e-0870
contractile cell7.86e-0859
muscle precursor cell3.04e-0757
myoblast3.04e-0757
multi-potent skeletal muscle stem cell3.04e-0757
muscle cell5.31e-0754
Uber Anatomy
Ontology termp-valuen
lateral plate mesoderm3.37e-29216
cardiovascular system6.09e-23110
vessel1.75e-2269
circulatory system1.22e-21113
vasculature5.80e-2179
vascular system5.80e-2179
blood vessel4.38e-2060
epithelial tube open at both ends4.38e-2060
blood vasculature4.38e-2060
vascular cord4.38e-2060
splanchnic layer of lateral plate mesoderm1.44e-1784
artery1.83e-1642
arterial blood vessel1.83e-1642
arterial system1.83e-1642
musculoskeletal system8.10e-14167
hemolymphoid system3.59e-13112
systemic artery5.29e-1333
systemic arterial system5.29e-1333
mesoderm7.03e-12448
mesoderm-derived structure7.03e-12448
presumptive mesoderm7.03e-12448
hematopoietic system1.81e-10102
blood island1.81e-10102
epithelial tube7.08e-10118
endothelium4.13e-0918
blood vessel endothelium4.13e-0918
cardiovascular system endothelium4.13e-0918
aorta7.78e-0921
aortic system7.78e-0921
bone marrow1.44e-0880
skeletal element2.87e-08101
skeletal system2.87e-08101
multilaminar epithelium3.95e-0882
bone element4.25e-0886
simple squamous epithelium1.60e-0722
squamous epithelium3.99e-0725
somite5.19e-0783
paraxial mesoderm5.19e-0783
presomitic mesoderm5.19e-0783
presumptive segmental plate5.19e-0783
trunk paraxial mesoderm5.19e-0783
presumptive paraxial mesoderm5.19e-0783
dermomyotome7.82e-0770
immune system8.28e-07115


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data


(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
CCNT2#90536.336201576962630.003930750035764890.0190985625952663
CTBP2#1488362.71700033932814.049570681927e-060.00013045438385249
EBF1#187938.9064668465690.00141523283560980.00918731365727576
EGR1#195834.988179094810140.008056488137383440.0322231757268761
ETS1#211339.728760922202340.001085840092584840.00764899861253661
SIN3A#2594235.408884726815140.006318961977991520.0278094505085945
SMARCB1#6598318.25271578115740.000164397760679890.00203889534825401
ZBTB7A#5134137.35190930787590.002516255860282270.0140825918113724
ZNF263#1012738.221841637010680.001799043925565870.0110038271474187



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data


This analysis result is provided for C0 - C305 clusters.