FFCP PHASE1:Hg19::chr19:18288839..18288881,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-119bp_to_CU676849,CU689079_5end | |||
|coexpression_cluster_id=C143 | |||
|description=CAGE_peak_2_at_CU676849_5end,CAGE_peak_2_at_CU689079_5end | |||
|id=chr19:18288839..18288881,- | |||
|ontology_enrichment_celltype=CL:0002194!5.33e-38!63;CL:0000576!5.33e-38!63;CL:0000040!5.33e-38!63;CL:0000559!5.33e-38!63;CL:0002009!1.01e-37!65;CL:0000557!2.14e-33!71;CL:0000860!2.22e-33!45;CL:0002057!4.37e-33!42;CL:0000839!1.13e-32!70;CL:0000766!2.63e-32!76;CL:0002087!2.27e-30!119;CL:0000738!1.15e-29!140;CL:0002031!7.47e-26!124;CL:0000763!2.37e-20!112;CL:0000049!2.37e-20!112;CL:0000037!3.52e-20!172;CL:0000566!3.52e-20!172;CL:0002032!2.60e-19!165;CL:0000837!2.60e-19!165;CL:0000988!4.71e-19!182;CL:0000134!7.11e-09!358;CL:0002320!1.37e-08!365;CL:0002393!2.67e-08!9;CL:0002397!2.67e-08!9;CL:0000034!7.55e-08!444;CL:0000723!2.14e-07!436;CL:0000048!2.53e-07!430;CL:0000219!6.65e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.04e-58;39!CL:0000234;1.04e-58;39!CL:0000860;5.63e-57;33!CL:0002057;5.63e-57;33!CL:0000576;8.85e-53;48!CL:0000766;1.31e-35;69!CL:0000235;1.10e-15;6!CL:0000763;1.53e-15;100!CL:0000738;3.01e-15;136!CL:0002087;6.43e-15;104!CL:0000451;4.74e-12;10!CL:0000990;8.95e-12;8!CL:0002393;3.34e-10;6!CL:0002397;3.34e-10;6!CL:0002619;2.30e-08;3!CL:0000988;2.89e-08;177!CL:0000875;3.38e-08;3!CL:0002396;3.38e-08;3!CL:0000453;3.25e-07;5!CL:0000219;4.84e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.42e-95,61;CL:0002194,1.99e-95,59;CL:0000576,1.99e-95,59;CL:0000040,1.99e-95,59;CL:0000559,1.99e-95,59;CL:0000473,1.40e-93,48;CL:0000234,1.40e-93,48;CL:0000557,9.08e-86,67;CL:0000839,7.45e-84,66;CL:0000766,3.22e-82,72;CL:0000860,7.47e-79,42;CL:0002057,7.47e-79,42;CL:0000738,1.69e-62,136;CL:0002087,4.21e-60,115;CL:0000763,8.00e-59,108;CL:0000049,8.00e-59,108;CL:0002031,6.75e-55,120;CL:0000037,2.86e-47,168;CL:0000988,1.63e-45,177;CL:0002032,4.63e-45,161;CL:0000837,4.63e-45,161;CL:0000134,2.19e-19,354;CL:0002320,1.19e-18,361;CL:0002393,1.25e-16,9;CL:0002397,1.25e-16,9;CL:0000219,4.53e-16,386;CL:0000235,1.11e-15,6;CL:0000048,1.18e-15,427;CL:0000723,3.58e-15,433;CL:0000034,1.49e-14,441;CL:0000451,4.23e-12,10;CL:0000990,6.66e-12,8;CL:0002619,2.26e-08,3;CL:0000875,3.31e-08,3;CL:0002396,3.31e-08,3;CL:0000453,2.33e-07,5;CL:0000346,8.39e-07,3;CL:1000428,8.39e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.80e-56;42!CL:0000049;1.34e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.18e-38!102;UBERON:0003061!6.18e-38!102;UBERON:0002193!5.11e-37!112;UBERON:0002371!2.98e-30!80;UBERON:0001474!4.80e-28!86;UBERON:0002405!3.68e-23!115;UBERON:0004765!2.91e-22!101;UBERON:0001434!2.91e-22!101;UBERON:0002204!6.50e-12!167;UBERON:0003081!4.57e-10!216;UBERON:0002384!1.60e-08!375;UBERON:0000178!2.11e-07!15;UBERON:0000179!2.11e-07!15;UBERON:0000463!2.11e-07!15;UBERON:0001737!6.62e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.02e-09;15!UBERON:0000179;1.02e-09;15!UBERON:0000463;1.02e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.07e-81,98;UBERON:0003061,1.07e-81,98;UBERON:0002371,6.14e-77,76;UBERON:0002193,4.11e-75,108;UBERON:0001474,3.04e-70,82;UBERON:0002405,3.46e-65,93;UBERON:0004765,1.08e-62,90;UBERON:0001434,6.03e-55,100;UBERON:0003081,1.51e-34,203;UBERON:0002204,9.63e-31,167;UBERON:0000926,2.03e-19,315;UBERON:0004120,2.03e-19,315;UBERON:0006603,2.03e-19,315;UBERON:0002384,1.19e-17,371;UBERON:0000178,1.04e-09,15;UBERON:0000179,1.04e-09,15;UBERON:0000463,1.04e-09,15;UBERON:0000412,8.39e-07,3;UBERON:0001992,8.39e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,0.786728553697808,0,3.40595471295367,0,0,0,1.31694240986513,2.84338464974843,0,3.87796785972314,0.200544447470142,1.51907609501096,25.7502795375913,12.9557466407592,11.8484761111726,7.85150489409649,7.935394817465,7.03493777444667,7.43772918098191,6.16751832032739,13.6270803193846,16.3984663623626,8.70946402198942,22.7022940693042,4.82643953031266,0,1.35426486594342,11.2945403725563,5.73102915121476,32.8096287289824,17.7528657575123,9.30694178520671,10.2293940127847,6.26717470354761,6.18337338627059,8.09827026012119,8.12585868160035,0.56738522469114,2.4912889959823,11.3061899365534,10.429658368404,22.370451004627,9.08099253950053,4.05105399586321,17.7218936966895,26.4069107889927,34.4418965943371,23.4817682969381,17.2986091965602,13.6660972485771,3.2145117339416,4.84521664360123,19.4938343655108,14.9784606087,1.75996244461323,0,0,0,1.20118796110804,0,0,0,0,0.587237189370939,0,0,0,0.790152254325231,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.260118695119756,0.328875809207352,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0.087834785693126,0,0,0,13.6309905334967,13.4079897720436,7.04677190749985,0.476981248610684,1.14398982156026,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0,0,0,0,0,0.245668634623536,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0.339121184620975,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0.721879481669586,1.65629520055781,0.674338760312407,0.964044119533928,1.21323370005633,0.653638332277218,0.71181185733329,0.943819157121151,1.17732879075208,1.15424147083917,0,0,0,0,0,0,0,0,0.368965315629341,0,0.109750285408626,0,0,0.277765335475589,0,0,0,0,0,0.433099343283221,1.38895653772983,0.380508304469197,0.790204397959275,0,27.8225216878759,13.1042388477973,13.674066930563,0,0,0,0,0,0.383382679165211,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,49.8657500628881,31.642196760224,35.8417697121154,0,0,0,0.144781306667579,0,0.358121926479791,0.224170287987055,0.197030760201927,0,0.128343036279748,0,0,0,0.167516265334349,0,0,2.99161459204025,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.94142780736755,1.17400313583789,0.303127571446259,0,0,0.248107807818777,0,0.841980283299221,0.128139149255701,0,0.160853921143607,0,0,1.06537035187876,0.164254312027618,0,0.813472649219715,0.241718899183244,0.40101294060657,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0,0,0.206082023295445,0,0.247528499761764,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0.42793898803392,0.636406495851874,0,0,0.274537029736055,0,0,0,0.842516912477962,0,1.21856744815642,0,0,0,1.13008116620243,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,1.52927441428475,0.569647187174163,2.38231775457789,2.05681136543097,1.94541993357815,0,0.79312517629427,0.213648142254946,0,0.490080431962063,0.185803175125719,0.432807638929335,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0,0.222617410045812,0.329607748453519,0,0,0,0,0,1.10776324914963,0.311039587661807,0,0,0,0,2.3948309234694,0,0,0,0,0.260427761085233,0.262379999988587,0,0.341380344856499,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0.435753854075961,0,0,0.341826167541004,0,0.269272933229316,0,2.23300811812344,0.549585560411174,1.06606955203727,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0.247127877893006,1.14864144456001,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0.569219092059585,0.138674673013139,0.347119476670262,0.0979923974143777,0.174118413160805,0.34945333648406,0,0.290268993867255,0.0730893170861856,0.246346371159628,0,0,0,0,0,0,0.391102765469606,0.160317640503067,0,0.599428828746391,0,0,0,0,0.124252535565433,0,0,0,0.407992870545287,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0.164831716762333,0,0.295282444544246,0.423366660328922,0,0,0.160753148465019,0,0.83088067605837,1.799791132412,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0,0.13223260174269,0.342173675768659,0,0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| |||
|short_description=p2@CU676849,p2@CU689079 | |||
}} |
Revision as of 22:08, 20 January 2014
Short description: | p2@CU676849, p2@CU689079 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_2_at_CU676849_5end, CAGE_peak_2_at_CU689079_5end |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | -119bp_to_CU676849, CU689079_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.07e-81 | 98 |
blood island | 1.07e-81 | 98 |
bone marrow | 6.14e-77 | 76 |
hemolymphoid system | 4.11e-75 | 108 |
bone element | 3.04e-70 | 82 |
immune system | 3.46e-65 | 93 |
skeletal element | 1.08e-62 | 90 |
skeletal system | 6.03e-55 | 100 |
lateral plate mesoderm | 1.51e-34 | 203 |
musculoskeletal system | 9.63e-31 | 167 |
mesoderm | 2.03e-19 | 315 |
mesoderm-derived structure | 2.03e-19 | 315 |
presumptive mesoderm | 2.03e-19 | 315 |
connective tissue | 1.19e-17 | 371 |
blood | 1.04e-09 | 15 |
haemolymphatic fluid | 1.04e-09 | 15 |
organism substance | 1.04e-09 | 15 |
dermal papilla | 8.39e-07 | 3 |
papillary layer of dermis | 8.39e-07 | 3 |