FFCP PHASE1:Mm9::chr8:121801329..121801340,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12554|HGNC=|MCL_coexpression_id=10|UniProt=|association_with_transcript=18bp_to_ENSMUST00000151842_5end|description=CAGE_peak_9_at_Cdh13_5end|id=chr8:121801329..121801340,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.10e-31!18;UBERON:0000948!2.10e-31!18;UBERON:0005498!2.10e-31!18;UBERON:0004140!2.10e-31!18;UBERON:0009881!2.10e-31!18;UBERON:0004141!2.10e-31!18;UBERON:0003084!2.10e-31!18;UBERON:0007005!2.10e-31!18;UBERON:0004139!2.10e-31!18;UBERON:0004291!2.10e-31!18;UBERON:0004535!2.03e-27!23;UBERON:0001009!2.03e-27!23;UBERON:0004872!3.01e-20!33;UBERON:0003103!1.40e-14!43;UBERON:0003914!4.86e-13!47;UBERON:0004111!2.10e-10!122;UBERON:0000025!2.13e-10!114;UBERON:0002048!4.04e-08!14;UBERON:0000117!4.04e-08!14;UBERON:0000171!4.04e-08!14;UBERON:0000170!4.04e-08!14;UBERON:0005597!4.04e-08!14;UBERON:0000118!4.04e-08!14;UBERON:0000477!5.15e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.06e-26,23;UBERON:0001009,1.06e-26,23;UBERON:0007100,3.01e-25,18;UBERON:0000948,3.01e-25,18;UBERON:0005498,3.01e-25,18;UBERON:0004140,3.01e-25,18;UBERON:0009881,3.01e-25,18;UBERON:0004141,3.01e-25,18;UBERON:0003084,3.01e-25,18;UBERON:0007005,3.01e-25,18;UBERON:0004139,3.01e-25,18;UBERON:0004291,3.01e-25,18;UBERON:0004872,1.03e-18,33;UBERON:0003914,3.25e-13,47;UBERON:0003103,9.82e-11,43;UBERON:0003081,3.43e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502666365318702,0,1.3013942122792,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.930135779001631,0.804820204198858,0.934122738937356,3.29119699826961,4.92502392237286,6.08016071593918,4.82459958503597,5.70830299756732,2.95254121272818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0.956728611944923,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p9@Cdh13}} | ||
|EntrezGene=12554 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|UniProt= | |||
|association_with_transcript=18bp_to_ENSMUST00000151842_5end | |||
|description=CAGE_peak_9_at_Cdh13_5end | |||
|id=chr8:121801329..121801340,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.10e-31!18;UBERON:0000948!2.10e-31!18;UBERON:0005498!2.10e-31!18;UBERON:0004140!2.10e-31!18;UBERON:0009881!2.10e-31!18;UBERON:0004141!2.10e-31!18;UBERON:0003084!2.10e-31!18;UBERON:0007005!2.10e-31!18;UBERON:0004139!2.10e-31!18;UBERON:0004291!2.10e-31!18;UBERON:0004535!2.03e-27!23;UBERON:0001009!2.03e-27!23;UBERON:0004872!3.01e-20!33;UBERON:0003103!1.40e-14!43;UBERON:0003914!4.86e-13!47;UBERON:0004111!2.10e-10!122;UBERON:0000025!2.13e-10!114;UBERON:0002048!4.04e-08!14;UBERON:0000117!4.04e-08!14;UBERON:0000171!4.04e-08!14;UBERON:0000170!4.04e-08!14;UBERON:0005597!4.04e-08!14;UBERON:0000118!4.04e-08!14;UBERON:0000477!5.15e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.06e-26,23;UBERON:0001009,1.06e-26,23;UBERON:0007100,3.01e-25,18;UBERON:0000948,3.01e-25,18;UBERON:0005498,3.01e-25,18;UBERON:0004140,3.01e-25,18;UBERON:0009881,3.01e-25,18;UBERON:0004141,3.01e-25,18;UBERON:0003084,3.01e-25,18;UBERON:0007005,3.01e-25,18;UBERON:0004139,3.01e-25,18;UBERON:0004291,3.01e-25,18;UBERON:0004872,1.03e-18,33;UBERON:0003914,3.25e-13,47;UBERON:0003103,9.82e-11,43;UBERON:0003081,3.43e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502666365318702,0,1.3013942122792,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.930135779001631,0.804820204198858,0.934122738937356,3.29119699826961,4.92502392237286,6.08016071593918,4.82459958503597,5.70830299756732,2.95254121272818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0.956728611944923,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p9@Cdh13 | |||
}} |
Revision as of 14:54, 14 September 2013
Short description: | p9@Cdh13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Cdh13_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 18bp_to_ENSMUST00000151842_5end |
EntrezGene: | Cdh13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.06e-26 | 23 |
circulatory system | 1.06e-26 | 23 |
primary circulatory organ | 3.01e-25 | 18 |
heart | 3.01e-25 | 18 |
primitive heart tube | 3.01e-25 | 18 |
primary heart field | 3.01e-25 | 18 |
anterior lateral plate mesoderm | 3.01e-25 | 18 |
heart tube | 3.01e-25 | 18 |
heart primordium | 3.01e-25 | 18 |
cardiac mesoderm | 3.01e-25 | 18 |
cardiogenic plate | 3.01e-25 | 18 |
heart rudiment | 3.01e-25 | 18 |
splanchnic layer of lateral plate mesoderm | 1.03e-18 | 33 |
epithelial tube | 3.25e-13 | 47 |
compound organ | 9.82e-11 | 43 |
lateral plate mesoderm | 3.43e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.