FFCP PHASE1:Hg19::chr16:18065806..18065813,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:18065806..18065813,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_at_chr16:18065806..18065813,- | |description=CAGE_peak_at_chr16:18065806..18065813,- | ||
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|ontology_enrichment_celltype=CL:0000946!2.75e-15!1;CL:0000786!2.75e-15!1;CL:0000980!2.75e-15!1;CL:0000785!2.67e-08!2;CL:0000955!2.67e-08!2;CL:0000818!2.67e-08!2;CL:0000954!2.67e-08!2;CL:0000816!2.67e-08!2;CL:0000047!4.04e-08!8 | |ontology_enrichment_celltype=CL:0000946!2.75e-15!1;CL:0000786!2.75e-15!1;CL:0000980!2.75e-15!1;CL:0000785!2.67e-08!2;CL:0000955!2.67e-08!2;CL:0000818!2.67e-08!2;CL:0000954!2.67e-08!2;CL:0000816!2.67e-08!2;CL:0000047!4.04e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;8.10e-26;2 | |ontology_enrichment_celltype_v019=CL:0000047;8.10e-26;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.80e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.42e-50;1!UBERON:0003056;8.00e-18;3 | |ontology_enrichment_development_v019=UBERON:0005425;2.42e-50;1!UBERON:0003056;8.00e-18;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!5.20e-30!2;UBERON:0002757!5.20e-30!2;UBERON:0010134!5.20e-30!2;UBERON:0002784!5.20e-30!2;UBERON:0005408!5.20e-30!2;UBERON:0001899!5.20e-30!2;UBERON:0000941!6.44e-16!1;UBERON:0004904!6.44e-16!1;UBERON:0002464!6.44e-16!1;UBERON:0001021!6.44e-16!1;UBERON:0001785!6.44e-16!1;UBERON:0000989!1.16e-15!1;UBERON:0008811!1.16e-15!1;UBERON:0006258!1.16e-15!1;UBERON:0005876!1.16e-15!1;UBERON:0004874!1.16e-15!1;UBERON:0003296!1.55e-15!4;UBERON:0010133!1.55e-15!4;UBERON:0001894!2.80e-09!7;UBERON:0006222!2.80e-09!7;UBERON:0003714!1.29e-08!2;UBERON:0005162!1.29e-08!2;UBERON:0000122!1.29e-08!2;UBERON:0002368!8.02e-07!35 | |ontology_enrichment_uberon=UBERON:0001905!5.20e-30!2;UBERON:0002757!5.20e-30!2;UBERON:0010134!5.20e-30!2;UBERON:0002784!5.20e-30!2;UBERON:0005408!5.20e-30!2;UBERON:0001899!5.20e-30!2;UBERON:0000941!6.44e-16!1;UBERON:0004904!6.44e-16!1;UBERON:0002464!6.44e-16!1;UBERON:0001021!6.44e-16!1;UBERON:0001785!6.44e-16!1;UBERON:0000989!1.16e-15!1;UBERON:0008811!1.16e-15!1;UBERON:0006258!1.16e-15!1;UBERON:0005876!1.16e-15!1;UBERON:0004874!1.16e-15!1;UBERON:0003296!1.55e-15!4;UBERON:0010133!1.55e-15!4;UBERON:0001894!2.80e-09!7;UBERON:0006222!2.80e-09!7;UBERON:0003714!1.29e-08!2;UBERON:0005162!1.29e-08!2;UBERON:0000122!1.29e-08!2;UBERON:0002368!8.02e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.21e-98;2!UBERON:0002757;1.21e-98;2!UBERON:0010134;1.21e-98;2!UBERON:0005408;1.21e-98;2!UBERON:0001899;1.21e-98;2!UBERON:0000941;2.42e-50;1!UBERON:0001785;2.42e-50;1!UBERON:0002464;2.42e-50;1!UBERON:0004904;2.42e-50;1!UBERON:0001021;2.42e-50;1!UBERON:0003296;4.53e-50;4!UBERON:0010133;4.53e-50;4!UBERON:0002784;4.53e-50;4!UBERON:0001894;3.40e-29;7!UBERON:0003714;5.56e-26;2!UBERON:0005162;5.56e-26;2!UBERON:0000122;5.56e-26;2!UBERON:0000010;7.91e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0001905;1.21e-98;2!UBERON:0002757;1.21e-98;2!UBERON:0010134;1.21e-98;2!UBERON:0005408;1.21e-98;2!UBERON:0001899;1.21e-98;2!UBERON:0000941;2.42e-50;1!UBERON:0001785;2.42e-50;1!UBERON:0002464;2.42e-50;1!UBERON:0004904;2.42e-50;1!UBERON:0001021;2.42e-50;1!UBERON:0003296;4.53e-50;4!UBERON:0010133;4.53e-50;4!UBERON:0002784;4.53e-50;4!UBERON:0001894;3.40e-29;7!UBERON:0003714;5.56e-26;2!UBERON:0005162;5.56e-26;2!UBERON:0000122;5.56e-26;2!UBERON:0000010;7.91e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.38e-99,2;UBERON:0002757,9.38e-99,2;UBERON:0010134,9.38e-99,2;UBERON:0005408,9.38e-99,2;UBERON:0001899,9.38e-99,2;UBERON:0000941,2.42e-50,1;UBERON:0001785,2.42e-50,1;UBERON:0002464,2.42e-50,1;UBERON:0004904,2.42e-50,1;UBERON:0001021,2.42e-50,1;UBERON:0003902,2.42e-50,1;UBERON:0005425,2.42e-50,1;UBERON:0003296,4.00e-50,4;UBERON:0010133,4.00e-50,4;UBERON:0002784,4.00e-50,4;UBERON:0001894,3.16e-29,7;UBERON:0006222,3.16e-29,7;UBERON:0003714,5.56e-26,2;UBERON:0005162,5.56e-26,2;UBERON:0000122,5.56e-26,2;UBERON:0001781,1.00e-13,4;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0003056,4.28e-08,61;UBERON:0000010,7.91e-07,8 | |||
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|short_description=p@chr16:18065806..18065813,- | |short_description=p@chr16:18065806..18065813,- | ||
}} | }} |
Latest revision as of 06:44, 25 July 2015
Short description: | p@chr16:18065806..18065813, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:18065806..18065813, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
pineal body | 9.38e-99 | 2 |
regional part of epithalamus | 9.38e-99 | 2 |
secretory circumventricular organ | 9.38e-99 | 2 |
circumventricular organ | 9.38e-99 | 2 |
epithalamus | 9.38e-99 | 2 |
cranial nerve II | 2.42e-50 | 1 |
cranial nerve | 2.42e-50 | 1 |
nerve trunk | 2.42e-50 | 1 |
nerve connecting eye with brain | 2.42e-50 | 1 |
nerve | 2.42e-50 | 1 |
retinal neural layer | 2.42e-50 | 1 |
presumptive neural retina | 2.42e-50 | 1 |
gland of diencephalon | 4.00e-50 | 4 |
neuroendocrine gland | 4.00e-50 | 4 |
regional part of diencephalon | 4.00e-50 | 4 |
diencephalon | 3.16e-29 | 7 |
future diencephalon | 3.16e-29 | 7 |
neural tissue | 5.56e-26 | 2 |
multi cell component structure | 5.56e-26 | 2 |
neuron projection bundle | 5.56e-26 | 2 |
layer of retina | 1.00e-13 | 4 |
retina | 1.32e-09 | 6 |
photoreceptor array | 1.32e-09 | 6 |
posterior segment of eyeball | 1.32e-09 | 6 |
nervous system | 1.88e-09 | 89 |
pre-chordal neural plate | 4.28e-08 | 61 |
peripheral nervous system | 7.91e-07 | 8 |