FFCP PHASE1:Hg19::chr17:54188329..54188350,+: Difference between revisions
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|id=chr17:54188329..54188350,+
|short_description=p@chr17:54188329..54188350,+
|description=CAGE_peak_at_chr17:54188329..54188350,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:54188329..54188350,+ | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_at_chr17:54188329..54188350,+ | |||
|id=chr17:54188329..54188350,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.55e-17;29!UBERON:0006965;2.35e-11;2!UBERON:0007297;3.52e-11;2 | |||
|ontology_enrichment_disease=DOID:178!3.83e-09!1;DOID:326!3.83e-09!1;DOID:3978!3.83e-09!1;DOID:3394!3.83e-09!1;DOID:5844!3.83e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.26e-17!2;UBERON:0000341!1.76e-17!2;UBERON:0007023!6.23e-15!115;UBERON:0002171!1.03e-09!1;UBERON:0006518!1.03e-09!1;UBERON:0008949!1.03e-09!1;UBERON:0000101!1.03e-09!1;UBERON:0002167!1.03e-09!1;UBERON:0001301!1.69e-09!1;UBERON:0006834!2.55e-09!1;UBERON:0001154!2.77e-09!1;UBERON:0001153!2.77e-09!1;UBERON:0002372!4.50e-09!1;UBERON:0001961!4.50e-09!1;UBERON:0001744!4.50e-09!1;UBERON:0001735!4.50e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.49e-40;2!UBERON:0000341;4.49e-40;2!UBERON:0002171;2.54e-21;1!UBERON:0006518;2.54e-21;1!UBERON:0008949;2.54e-21;1!UBERON:0000101;2.54e-21;1!UBERON:0002167;2.54e-21;1!UBERON:0001301;5.71e-21;1!UBERON:0000974;4.24e-14;6!UBERON:0003126;2.31e-12;7!UBERON:0001005;2.31e-12;7!UBERON:0005178;7.53e-12;34!UBERON:0002224;7.53e-12;34!UBERON:0005181;3.00e-10;35!UBERON:0000065;6.13e-09;44!UBERON:0002048;8.03e-09;22!UBERON:0000117;8.03e-09;22!UBERON:0000171;8.03e-09;22!UBERON:0000170;8.03e-09;22!UBERON:0006947;7.02e-08;3!UBERON:0004054;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.64e-40,2;UBERON:0000341,3.68e-40,2;UBERON:0002171,2.82e-21,1;UBERON:0006518,2.82e-21,1;UBERON:0008949,2.82e-21,1;UBERON:0000101,2.82e-21,1;UBERON:0002167,2.82e-21,1;UBERON:0001301,9.43e-21,1;UBERON:0005178,8.29e-15,34;UBERON:0002224,8.29e-15,34;UBERON:0005181,2.17e-14,35;UBERON:0008947,2.88e-13,38;UBERON:0003258,2.88e-13,38;UBERON:0003126,2.37e-12,7;UBERON:0001005,2.37e-12,7;UBERON:0000915,9.99e-10,52;UBERON:0000065,2.27e-09,54;UBERON:0000974,7.36e-09,10;UBERON:0002048,7.82e-09,22;UBERON:0000117,7.82e-09,22;UBERON:0000171,7.82e-09,22;UBERON:0000170,7.82e-09,22;UBERON:0005597,7.82e-09,22;UBERON:0000118,7.82e-09,22;UBERON:0007023,2.84e-08,114;UBERON:0006947,8.29e-08,3;UBERON:0004054,8.29e-08,3;UBERON:0005177,5.44e-07,101;UBERON:0001004,7.52e-07,74 | |||
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|short_description=p@chr17:54188329..54188350,+ | |||
}} | }} |
Latest revision as of 19:04, 25 July 2015
Short description: | p@chr17:54188329..54188350, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:54188329..54188350, + |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.64e-40 | 2 |
throat | 3.68e-40 | 2 |
lower lobe of right lung | 2.82e-21 | 1 |
right lung lobe | 2.82e-21 | 1 |
lower lobe of lung | 2.82e-21 | 1 |
lobe of lung | 2.82e-21 | 1 |
right lung | 2.82e-21 | 1 |
epididymis | 9.43e-21 | 1 |
thoracic cavity element | 8.29e-15 | 34 |
thoracic cavity | 8.29e-15 | 34 |
thoracic segment organ | 2.17e-14 | 35 |
respiratory primordium | 2.88e-13 | 38 |
endoderm of foregut | 2.88e-13 | 38 |
trachea | 2.37e-12 | 7 |
respiratory airway | 2.37e-12 | 7 |
thoracic segment of trunk | 9.99e-10 | 52 |
respiratory tract | 2.27e-09 | 54 |
neck | 7.36e-09 | 10 |
lung | 7.82e-09 | 22 |
respiratory tube | 7.82e-09 | 22 |
respiration organ | 7.82e-09 | 22 |
pair of lungs | 7.82e-09 | 22 |
lung primordium | 7.82e-09 | 22 |
lung bud | 7.82e-09 | 22 |
adult organism | 2.84e-08 | 114 |
male genital duct | 8.29e-08 | 3 |
internal male genitalia | 8.29e-08 | 3 |
trunk region element | 5.44e-07 | 101 |
respiratory system | 7.52e-07 | 74 |