FFCP PHASE1:Hg19::chr20:52681445..52681457,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:52681445..52681457,+ | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr20:52681445..52681457,+ | |description=CAGE_peak_at_chr20:52681445..52681457,+ | ||
|id=chr20:52681445..52681457,+ | |id=chr20:52681445..52681457,+ | ||
|ontology_enrichment_celltype=CL:0000945!6.17e-51!24;CL:0000826!6.17e-51!24;CL:0000838!3.50e-27!52;CL:0000542!1.23e-26!53;CL:0000051!1.23e-26!53;CL:0000785!1.66e-22!2;CL:0000955!1.66e-22!2;CL:0000818!1.66e-22!2;CL:0000954!1.66e-22!2;CL:0000816!1.66e-22!2;CL:0000817!2.42e-15!3;CL:0000236!1.88e-12!14;CL:0000819!3.65e-12!1;CL:0000946!4.06e-12!1;CL:0000786!4.06e-12!1;CL:0000980!4.06e-12!1;CL:0002087!8.49e-11!119;CL:0002031!2.71e-10!124;CL:0000738!6.39e-09!140;CL:0002032!2.65e-07!165;CL:0000837!2.65e-07!165;CL:0000037!6.20e-07!172;CL:0000566!6.20e-07!172 | |ontology_enrichment_celltype=CL:0000945!6.17e-51!24;CL:0000826!6.17e-51!24;CL:0000838!3.50e-27!52;CL:0000542!1.23e-26!53;CL:0000051!1.23e-26!53;CL:0000785!1.66e-22!2;CL:0000955!1.66e-22!2;CL:0000818!1.66e-22!2;CL:0000954!1.66e-22!2;CL:0000816!1.66e-22!2;CL:0000817!2.42e-15!3;CL:0000236!1.88e-12!14;CL:0000819!3.65e-12!1;CL:0000946!4.06e-12!1;CL:0000786!4.06e-12!1;CL:0000980!4.06e-12!1;CL:0002087!8.49e-11!119;CL:0002031!2.71e-10!124;CL:0000738!6.39e-09!140;CL:0002032!2.65e-07!165;CL:0000837!2.65e-07!165;CL:0000037!6.20e-07!172;CL:0000566!6.20e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000946;2.21e-40;1!CL:0000785;2.21e-40;1!CL:0000819;2.21e-40;1!CL:0000786;2.21e-40;1!CL:0000945;1.25e-15;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000785,1.16e-78,2;CL:0000955,1.16e-78,2;CL:0000818,1.16e-78,2;CL:0000954,1.16e-78,2;CL:0000816,1.16e-78,2;CL:0000817,6.39e-53,3;CL:0000819,2.21e-40,1;CL:0000946,3.30e-40,1;CL:0000786,3.30e-40,1;CL:0000980,3.30e-40,1;CL:0000945,1.31e-15,24;CL:0000826,1.31e-15,24;CL:0000236,2.82e-12,14;CL:0000838,1.23e-07,52;CL:0000542,1.66e-07,53;CL:0000051,1.66e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000954;7.79e-79;2!UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!2.70e-17!10;DOID:630!2.93e-12!1;DOID:0050177!2.93e-12!1;DOID:0050427!2.93e-12!1;DOID:0060073!3.65e-12!1;DOID:8675!3.65e-12!1 | |ontology_enrichment_disease=DOID:0060058!2.70e-17!10;DOID:630!2.93e-12!1;DOID:0050177!2.93e-12!1;DOID:0050427!2.93e-12!1;DOID:0060073!3.65e-12!1;DOID:8675!3.65e-12!1 | ||
|ontology_enrichment_disease_v019=DOID:630;9.91e-41;1!DOID:0050177;9.91e-41;1!DOID:0050427;9.91e-41;1!DOID:0060073;2.21e-40;1!DOID:8675;2.21e-40;1!DOID:0060058;6.93e-17;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,9.91e-41,1;DOID:0050177,9.91e-41,1;DOID:0050427,9.91e-41,1;DOID:0060073,2.21e-40,1;DOID:8675,2.21e-40,1;DOID:0060058,6.93e-17,10 | |||
|ontology_enrichment_uberon=UBERON:0001301!9.61e-12!1;UBERON:0002372!1.19e-11!1;UBERON:0001961!1.19e-11!1;UBERON:0001744!1.19e-11!1;UBERON:0001735!1.19e-11!1;UBERON:0004177!5.67e-07!7 | |ontology_enrichment_uberon=UBERON:0001301!9.61e-12!1;UBERON:0002372!1.19e-11!1;UBERON:0001961!1.19e-11!1;UBERON:0001744!1.19e-11!1;UBERON:0001735!1.19e-11!1;UBERON:0004177!5.67e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.22e-14;3!UBERON:0004177;2.53e-09;5!UBERON:0005057;2.53e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.22e-14,3;UBERON:0004854,1.22e-14,3;UBERON:0009034,1.22e-14,3;UBERON:0002095,1.22e-14,3;UBERON:0004782,1.22e-14,3;UBERON:0003281,1.22e-14,3;UBERON:0009664,1.22e-14,3;UBERON:0002296,1.22e-14,3;UBERON:0005602,1.22e-14,3;UBERON:0001179,1.22e-14,3;UBERON:0006293,1.22e-14,3;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58089305518355,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.09641051142066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,2.56454793842586 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58089305518355,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.09641051142066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,2.56454793842586 | ||
|short_description=p@chr20:52681445..52681457,+ | |short_description=p@chr20:52681445..52681457,+ | ||
}} | }} |
Latest revision as of 15:34, 28 July 2015
Short description: | p@chr20:52681445..52681457, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:52681445..52681457, + |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature B cell | 1.16e-78 | 2 |
pre-B-II cell | 1.16e-78 | 2 |
transitional stage B cell | 1.16e-78 | 2 |
small pre-B-II cell | 1.16e-78 | 2 |
immature B cell | 1.16e-78 | 2 |
precursor B cell | 6.39e-53 | 3 |
B-1 B cell | 2.21e-40 | 1 |
antibody secreting cell | 3.30e-40 | 1 |
plasma cell | 3.30e-40 | 1 |
plasmablast | 3.30e-40 | 1 |
lymphocyte of B lineage | 1.31e-15 | 24 |
pro-B cell | 1.31e-15 | 24 |
B cell | 2.82e-12 | 14 |
lymphoid lineage restricted progenitor cell | 1.23e-07 | 52 |
lymphocyte | 1.66e-07 | 53 |
common lymphoid progenitor | 1.66e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.22e-14 | 3 |
gastrointestinal system mesentery | 1.22e-14 | 3 |
stomach region | 1.22e-14 | 3 |
mesentery | 1.22e-14 | 3 |
gastrointestinal system serosa | 1.22e-14 | 3 |
mesentery of stomach | 1.22e-14 | 3 |
gut mesentery | 1.22e-14 | 3 |
dorsal mesentery | 1.22e-14 | 3 |
dorsal mesogastrium | 1.22e-14 | 3 |
peritoneal cavity | 1.22e-14 | 3 |
spleen primordium | 1.22e-14 | 3 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 9.91e-41 | 1 |
monogenic disease | 9.91e-41 | 1 |
xeroderma pigmentosum | 9.91e-41 | 1 |
lymphatic system cancer | 2.21e-40 | 1 |
lymphosarcoma | 2.21e-40 | 1 |
lymphoma | 6.93e-17 | 10 |