FFCP PHASE1:Mm9::chr7:17509250..17509375,-: Difference between revisions
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|id=chr7:17509250..17509375,- | |id=chr7:17509250..17509375,- | ||
|ontology_enrichment_celltype=CL:0000117!4.30e-13!23;CL:0000337!4.30e-13!23;CL:0000221!4.50e-13!44;CL:0000133!4.50e-13!44;CL:0002319!7.19e-13!43;CL:0000055!2.17e-11!50;CL:0000540!4.36e-10!33;CL:0000047!4.36e-10!33;CL:0000031!4.36e-10!33;CL:0000404!4.36e-10!33;CL:0000393!2.03e-09!39;CL:0000211!2.03e-09!39;CL:0002321!8.36e-08!70;CL:0000220!8.36e-08!70 | |ontology_enrichment_celltype=CL:0000117!4.30e-13!23;CL:0000337!4.30e-13!23;CL:0000221!4.50e-13!44;CL:0000133!4.50e-13!44;CL:0002319!7.19e-13!43;CL:0000055!2.17e-11!50;CL:0000540!4.36e-10!33;CL:0000047!4.36e-10!33;CL:0000031!4.36e-10!33;CL:0000404!4.36e-10!33;CL:0000393!2.03e-09!39;CL:0000211!2.03e-09!39;CL:0002321!8.36e-08!70;CL:0000220!8.36e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.30e-13,23;CL:0000337,4.30e-13,23;CL:0000221,4.50e-13,44;CL:0000133,4.50e-13,44;CL:0002319,7.19e-13,43;CL:0000540,4.36e-10,33;CL:0000047,4.36e-10,33;CL:0000031,4.36e-10,33;CL:0000404,4.36e-10,33;CL:0000393,2.03e-09,39;CL:0000211,2.03e-09,39;CL:0002321,8.36e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.76e-27!73;UBERON:0005743!2.76e-27!73;UBERON:0000073!1.86e-26!75;UBERON:0001016!1.86e-26!75;UBERON:0001049!1.55e-23!52;UBERON:0005068!1.55e-23!52;UBERON:0006241!1.55e-23!52;UBERON:0007135!1.55e-23!52;UBERON:0000955!4.91e-22!50;UBERON:0006238!4.91e-22!50;UBERON:0002616!1.53e-21!49;UBERON:0002020!7.43e-20!34;UBERON:0000033!1.57e-19!63;UBERON:0002346!2.09e-19!71;UBERON:0003075!2.09e-19!71;UBERON:0007284!2.09e-19!71;UBERON:0003080!1.14e-16!40;UBERON:0002791!1.24e-16!29;UBERON:0003528!1.24e-16!29;UBERON:0001893!1.24e-16!29;UBERON:0004121!3.18e-16!102;UBERON:0000924!3.18e-16!102;UBERON:0006601!3.18e-16!102;UBERON:0002780!3.76e-16!39;UBERON:0001890!3.76e-16!39;UBERON:0006240!3.76e-16!39;UBERON:0003056!7.19e-16!49;UBERON:0000956!2.81e-12!21;UBERON:0001869!2.81e-12!21;UBERON:0000203!2.81e-12!21;UBERON:0002619!9.64e-11!17;UBERON:0007811!5.34e-09!86;UBERON:0002021!5.75e-08!10;UBERON:0000411!5.75e-08!10;UBERON:0001950!5.75e-08!10;UBERON:0003076!1.48e-07!12;UBERON:0003057!1.48e-07!12;UBERON:0000153!6.13e-07!94 | |ontology_enrichment_uberon=UBERON:0001017!2.76e-27!73;UBERON:0005743!2.76e-27!73;UBERON:0000073!1.86e-26!75;UBERON:0001016!1.86e-26!75;UBERON:0001049!1.55e-23!52;UBERON:0005068!1.55e-23!52;UBERON:0006241!1.55e-23!52;UBERON:0007135!1.55e-23!52;UBERON:0000955!4.91e-22!50;UBERON:0006238!4.91e-22!50;UBERON:0002616!1.53e-21!49;UBERON:0002020!7.43e-20!34;UBERON:0000033!1.57e-19!63;UBERON:0002346!2.09e-19!71;UBERON:0003075!2.09e-19!71;UBERON:0007284!2.09e-19!71;UBERON:0003080!1.14e-16!40;UBERON:0002791!1.24e-16!29;UBERON:0003528!1.24e-16!29;UBERON:0001893!1.24e-16!29;UBERON:0004121!3.18e-16!102;UBERON:0000924!3.18e-16!102;UBERON:0006601!3.18e-16!102;UBERON:0002780!3.76e-16!39;UBERON:0001890!3.76e-16!39;UBERON:0006240!3.76e-16!39;UBERON:0003056!7.19e-16!49;UBERON:0000956!2.81e-12!21;UBERON:0001869!2.81e-12!21;UBERON:0000203!2.81e-12!21;UBERON:0002619!9.64e-11!17;UBERON:0007811!5.34e-09!86;UBERON:0002021!5.75e-08!10;UBERON:0000411!5.75e-08!10;UBERON:0001950!5.75e-08!10;UBERON:0003076!1.48e-07!12;UBERON:0003057!1.48e-07!12;UBERON:0000153!6.13e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.76e-27,73;UBERON:0001016,1.86e-26,75;UBERON:0000073,6.49e-25,54;UBERON:0001049,1.55e-23,52;UBERON:0005068,1.55e-23,52;UBERON:0006241,1.55e-23,52;UBERON:0007135,1.55e-23,52;UBERON:0002346,6.22e-22,64;UBERON:0003075,6.22e-22,64;UBERON:0007284,6.22e-22,64;UBERON:0000955,3.67e-20,47;UBERON:0006238,3.67e-20,47;UBERON:0002020,7.43e-20,34;UBERON:0002616,1.12e-19,46;UBERON:0004121,1.05e-17,95;UBERON:0000924,1.05e-17,95;UBERON:0006601,1.05e-17,95;UBERON:0003080,1.14e-16,40;UBERON:0003528,1.24e-16,29;UBERON:0002791,1.24e-16,29;UBERON:0001893,1.24e-16,29;UBERON:0002780,3.76e-16,39;UBERON:0001890,3.76e-16,39;UBERON:0006240,3.76e-16,39;UBERON:0010371,6.07e-16,73;UBERON:0003056,7.19e-16,49;UBERON:0010314,6.70e-14,92;UBERON:0000956,2.81e-12,21;UBERON:0001869,2.81e-12,21;UBERON:0000203,2.81e-12,21;UBERON:0002619,9.64e-11,17;UBERON:0002021,5.75e-08,10;UBERON:0000411,5.75e-08,10;UBERON:0001950,5.75e-08,10;UBERON:0003076,1.48e-07,12;UBERON:0003057,1.48e-07,12 | |||
|phase1_expression=328.945731953247,445.292620147825,366.274387708577,368.401409371719,339.106409173677,229.490964703553,231.510126830166,61.0753319878656,27.5945895417267,30.4283884218592,42.1196201834742,48.3419283511739,60.4338576657156,60.9320204860412,161.225124718781,157.525758029285,260.936580541799,64.6697438984387,64.1695549274857,67.0535649840888,499.969502798139,185.773369696856,190.675846071423,273.747035399519,281.944006431552,366.934225069498,348.055692896532,331.610227103583,521.994333246659,422.654527607404,333.926149046889,99.0647850597025,100.87062516387,142.633512913895,231.370147420771,218.931027937134,225.81130802618,253.630168226566,285.187400751187,280.085203025982,294.703975503538,293.026513047173,283.538046170194,166.561490181689,163.926497781955,178.407443101154,564.104159274936,655.601645236003,619.515035311211,473.242374346806,387.482415059003,585.072936965434,57.5494338778036,66.7333170650437,54.4471954610792,249.027134082797,276.218236100961,221.7389996793,863.688971409623,942.132934083491,860.743045961391,487.597281647481,412.632785395569,294.267207551017,253.149788817145,301.243568737146,508.720987660251,1046.99488200124,386.347495461388,408.527969391696,417.074398359791,1325.42056763365,1377.33622137426,478.44906173361,467.246671213902,470.640018744331,851.195760125275,1057.37884668344,947.905916724278,840.247539129065,861.173189229482,783.974622687924,1182.61918376985,974.70484057487,871.255608823371,959.310674302262,1040.02512823745,801.331217602967,133.65673123307,225.958964719289,101.742435534289,70.5547579124737,44.8781080247115,55.5894287386952,50.0327841434705,37.1862316290789,189.319078337601,226.672329028817,213.284309778955,233.204119176825,279.010814577604,137.30933083332,160.527301015187,170.656008756799,102.833244480327,104.637624441216,110.204329013223,184.63533350572,58.778899587908,129.886871681722,213.907407902646,195.162371598083,197.17625015393,184.635234676963,134.991835791789,174.29956217426,132.496502705624,53.6463614172872,184.883605357524,152.222605800512,160.993466957627,158.069332522082,199.439184503391,488.651150212272,636.717988712903,307.570294471144,165.824132316194,178.171111105042,167.986840190592,772.170746131861,732.000964509802,583.790119916368,939.17280199887,1166.8296317983,737.647558186438,815.100105652414,186.060517754528,122.540866050942,56.8626206475768,96.1719281401186,185.161390335927,252.89231487682,251.006608948657,259.21228667743,209.484380886938,279.928478822397,262.64593394092,199.71900221052,187.544153851573,147.124530370563,157.124353878406,174.260607279922,160.989357301621,135.470092777123,131.289003028268,146.887288912048,176.255510015622,161.871833575156,180.159658616806,130.903488242437,141.419214168601,162.055855314913,138.258925581763,158.001678093165,163.060338321959,166.959372330793,160.159220635573,161.486468493795,190.395746349897,181.076712879242,174.784353380865,158.48078636906,154.343731049609,134.609038016653,1010.23291290207,558.874949831894,294.07271685558,207.329244264219,153.567540385368,175.106450582771,185.826879226459,221.44851003643,222.600421888715,284.577536664389,369.18360988163,307.822346379176,280.2387578123,305.199228111125,277.04396779627,308.295057168398,322.910246512793,301.300746433858,195.547605882627,154.920983098792,131.868050737504,160.273595014262,166.993091451326,160.961706648281,186.42131144231,157.204807598276,189.340465776698,190.031632439573,39.724652029678,114.455742521241,136.608501603676,126.597369272673,144.233546307226,140.365106975907,139.280340924437,107.310659269152,70.6909588739154,116.139477778558,60.3826467414889,78.5217399580542,73.0168155088072,63.3972983647251,68.5298119653705,45.3496910081565,108.81962900813,160.499225769601,160.84643174828,153.279812454995,148.324236918333,143.050343855311,119.973995006551,108.689441856794,150.2262923332,135.757854754699,140.958015493219,124.536119183961,162.496567935808,130.907398016268,66.3481649332798,133.800798219403,63.9293554924747,58.4985902166033,814.312592418081,832.202974804643,204.590811830091,296.905810392343,177.946635750769,182.33489358653,216.069667925997,175.642066495126,181.358120703069,170.695148065666,182.569626455377,198.149471663869,173.136046740577,571.630621914395,136.688302055563,241.456958572798,166.470472459355,138.904843542875,126.107881422965,186.455528567026,231.882168191964,233.681693817558,301.79853452415,191.224662021123,152.731121262419,209.395428179043,212.115940138909,164.339114126624,162.344657205498,165.016869197099,150.814745348928,189.244209826907,225.472185833341,217.337753522035,209.616156165167,220.998965008965,244.519844614752,239.61391495319,109.826359373816,77.9542020778858,79.3902232997863,57.3804160236351,67.9765236389762,102.04946897844,92.5135666024308,74.8482502837479,313.633380213719,762.283416565205,138.747155207856,188.431210450422,152.044706970533,167.082821363161,155.011254235643,172.498742597718,143.121838054826,149.328199629343,138.338173778228,101.195085509602,139.662341166071,1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| ||
|short_description=p3@Calm3 | |short_description=p3@Calm3 | ||
}} | }} |
Revision as of 04:38, 14 November 2012
Short description: | p3@Calm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Calm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 5bp_to_NM_007590, uc009fin.1_5end |
EntrezGene: | Calm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.30e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.30e-13 | 23 |
ectodermal cell | 4.50e-13 | 44 |
neurectodermal cell | 4.50e-13 | 44 |
neural cell | 7.19e-13 | 43 |
neuron | 4.36e-10 | 33 |
neuronal stem cell | 4.36e-10 | 33 |
neuroblast | 4.36e-10 | 33 |
electrically signaling cell | 4.36e-10 | 33 |
electrically responsive cell | 2.03e-09 | 39 |
electrically active cell | 2.03e-09 | 39 |
embryonic cell | 8.36e-08 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.