FFCP PHASE1:Mm9::chr10:59757814..59757829,+: Difference between revisions
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|id=chr10:59757814..59757829,+ | |id=chr10:59757814..59757829,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.20e-11!50;CL:0002371!5.54e-10!118;CL:0000548!2.43e-09!115;CL:0000004!2.43e-09!115;CL:0000255!2.43e-09!115;CL:0000034!2.70e-09!97;CL:0000144!2.88e-09!121;CL:0000012!2.88e-09!121;CL:0000723!3.37e-09!91;CL:0000048!3.37e-09!91;CL:0000221!3.01e-08!44;CL:0000133!3.01e-08!44;CL:0002319!3.46e-08!43;CL:0000219!5.93e-07!54;CL:0000333!8.77e-07!10;CL:0000095!8.77e-07!10;CL:0000243!8.77e-07!10;CL:0000123!8.77e-07!10;CL:0000125!8.77e-07!10;CL:0000030!8.77e-07!10;CL:0000339!8.77e-07!10 | |ontology_enrichment_celltype=CL:0000055!6.20e-11!50;CL:0002371!5.54e-10!118;CL:0000548!2.43e-09!115;CL:0000004!2.43e-09!115;CL:0000255!2.43e-09!115;CL:0000034!2.70e-09!97;CL:0000144!2.88e-09!121;CL:0000012!2.88e-09!121;CL:0000723!3.37e-09!91;CL:0000048!3.37e-09!91;CL:0000221!3.01e-08!44;CL:0000133!3.01e-08!44;CL:0002319!3.46e-08!43;CL:0000219!5.93e-07!54;CL:0000333!8.77e-07!10;CL:0000095!8.77e-07!10;CL:0000243!8.77e-07!10;CL:0000123!8.77e-07!10;CL:0000125!8.77e-07!10;CL:0000030!8.77e-07!10;CL:0000339!8.77e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.01e-12,8;CL:0000333,6.14e-12,10;CL:0000095,6.14e-12,10;CL:0000243,6.14e-12,10;CL:0000123,6.14e-12,10;CL:0000125,6.14e-12,10;CL:0000030,6.14e-12,10;CL:0000339,6.14e-12,10;CL:0002321,6.80e-12,70;CL:0002319,7.19e-12,43;CL:0000221,1.83e-11,44;CL:0000133,1.83e-11,44;CL:0000034,3.34e-11,97;CL:0000723,7.59e-11,91;CL:0000048,7.59e-11,91;CL:0000128,1.23e-09,6;CL:0000126,1.23e-09,6;CL:0000127,1.23e-09,6;CL:0000219,9.57e-09,54;CL:0002194,6.02e-08,4;CL:0000766,6.02e-08,4;CL:0000234,6.02e-08,4;CL:0000576,6.02e-08,4;CL:0000235,6.02e-08,4;CL:0000864,6.02e-08,4;CL:0002009,6.02e-08,4;CL:0000040,6.02e-08,4;CL:0000559,6.02e-08,4;CL:0000393,7.76e-08,39;CL:0000211,7.76e-08,39;CL:0000222,7.96e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.80e-08!75;UBERON:0001016!2.80e-08!75;UBERON:0002204!4.17e-08!32;UBERON:0001017!1.02e-07!73;UBERON:0005743!1.02e-07!73 | |ontology_enrichment_uberon=UBERON:0000073!2.80e-08!75;UBERON:0001016!2.80e-08!75;UBERON:0002204!4.17e-08!32;UBERON:0001017!1.02e-07!73;UBERON:0005743!1.02e-07!73 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.50e-12,75;UBERON:0002020,1.07e-11,34;UBERON:0001017,1.71e-11,73;UBERON:0002021,4.40e-11,10;UBERON:0000411,4.40e-11,10;UBERON:0001950,4.40e-11,10;UBERON:0000073,2.43e-10,54;UBERON:0004121,2.74e-09,95;UBERON:0000924,2.74e-09,95;UBERON:0006601,2.74e-09,95;UBERON:0002619,7.19e-09,17;UBERON:0003528,2.21e-08,29;UBERON:0002791,2.21e-08,29;UBERON:0001893,2.21e-08,29;UBERON:0001049,8.61e-08,52;UBERON:0005068,8.61e-08,52;UBERON:0006241,8.61e-08,52;UBERON:0007135,8.61e-08,52;UBERON:0002346,6.19e-07,64;UBERON:0003075,6.19e-07,64;UBERON:0007284,6.19e-07,64;UBERON:0002204,9.50e-07,32 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,0,0.234064526321993,0,0.0797721589953364,0.171200729931206,0.34968160967599,0.999329285446988,0.404950534779652,0.699561878128147,1.10411757875383,0.685572168028694,0.42438965179803,0.680346321208558,0.198581902401771,0,0.319984845586813,0.91763712426868,0.57423196411502,0,0,1.14014051673824,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0.418531630736908,1.5626706890476,0.523523743973798,0.588231488031014,0,0,0.755380907853464,2.23029248682932,1.28482726513177,1.56478268869608,2.61630187656536,1.75748946187577,2.72201858703997,2.51975558925653,2.87505128729943,0.335565212115473,0,0.336093799142464,1.02903774414379,1.71920063963254,2.06268836910977,0.606949382578793,0,0.633831403506179,1.0165335962074,2.66788438833342,18.4479442042687,26.6993917893083,25.5772841380596,3.29560121570245,6.91592949578798,0.311068836925433,0.945041568321835,0,1.99955689082663,2.20868540951614,0,0.862609239164127,0,2.20231761998777,2.42605942361857,1.38245879930619,0.131886287730194,1.64677758484337,0,3.62937898701795,1.12552522006336,1.5279824777681,1.76777151284201,2.42031857358475,0.745597783301202,0.757261933331841,1.058001841495,1.44932244350839,0.860423876981386,0,2.15881276655127,0,0.896053774194671,0.421333260395256,1.1930122580464,1.03914401841148,2.47337702157238,0.422530259330042,0,0,0,0.432982082022428,0.506719730950197,2.02209778005913,0.45673551887624,0.776813650941515,0.742210695324124,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.578397427679647,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0.479260498023681,0,0.381210681219194,0.748953197024114,0,0.251308704225729,0.521472960576829,0.511430914660661,0.41557608911912,0.648965052271031,0.203678727700633,0.497627882440372,0,2.31486041475121,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.0680364991513279,0,0.0937017245597288,1.81092359517311,0,0,0,0.219195732427575,0.834141747676794,0,0,0,0.702213187313235,0,0.568326998791185,0,0,0.36012412292203,0.23674473558521,0.590292695242212,1.07986979021165,0.232533944750408,0.536546802799238,0.350296027101508,0.329119699826961,0.164167464079095,0.324275238183423,0,0.219550115291051,0.671032093801859,0.420579897128254,0,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.610953983535943,0,0.280543279561274,0.316182685621286,0,0.627994911365499,1.1105744752962,1.48226313543574,0,0,0.224862112384854,0,0,0.25462585178142,0,0.324270453550071,0.549122826376163,11.5014565221884,1.11642284300551,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0,0,0,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0,0.163863314715738,0.345369963731791,0.867894351489069,37.6978209848181,10.8781136763742,0.491764273019036,0.275936746304732,0.642202359951168,0.234423373184406,0.327869890753351,0.252470927204373,0.94652465824877,0,0.430846795465598,0.477937595905104,1.11399337041197,0,0.404810701674894,1.16902343164525,0.395287777946524,0.642642632843614,0.283880170416537,0.178065603667255,0.651547837414304,0.329940245945071,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0,0.713475270408282,0.164549020602121,0,5.63212099352905,0.847328283455281,0,0.16488625294148,0.322928853391811,0.0603129249281559,0.238744688006273,0,0,0,0.512612642393558,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,0,0.419854356970974,0,0.954670618015114,0.158167996790568,0,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0.168956125490778,0.352071715937262,0,0.209718688851422,0.483168241652012,0,0.316011120628178,0.405450430580328,0.308132871494482,0.25984164595559,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0.302478555410522,0.292373642219257,0.481059208201647,0.467507608726276,0.226730383615211,0.665957860122194,1.07656627931371,1.17519231454855,0.19318959403219,0.750729901804728,0.36630324853453,0.214368379079066,0,1.12950368523413,3.22227665555024,3.43737308063638,1.54667864109319,0,2.2661816921691,1.35004500046361,2.2516060161211,1.81256963593682,1.55328093525546,0,0.798049746802062,0,0.243106717068294,0.419226325255965,0.183843508450014,0.888986911206461,0.206035057238894,0,0,0.760437899670719,0.377252682772152,0.0936415074698824,0.256100609619477,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0.883193520806384,0.685738504770831,0.354951612318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| ||
|short_description=p@chr10:59757814..59757829,+ | |short_description=p@chr10:59757814..59757829,+ | ||
}} | }} |
Revision as of 05:48, 14 November 2012
Short description: | p@chr10:59757814..59757829, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:59757814..59757829, + |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.01e-12 | 8 |
migratory neural crest cell | 6.14e-12 | 10 |
neuron associated cell | 6.14e-12 | 10 |
glial cell (sensu Vertebrata) | 6.14e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 6.14e-12 | 10 |
glial cell | 6.14e-12 | 10 |
glioblast | 6.14e-12 | 10 |
glioblast (sensu Vertebrata) | 6.14e-12 | 10 |
embryonic cell | 6.80e-12 | 70 |
neural cell | 7.19e-12 | 43 |
ectodermal cell | 1.83e-11 | 44 |
neurectodermal cell | 1.83e-11 | 44 |
stem cell | 3.34e-11 | 97 |
somatic stem cell | 7.59e-11 | 91 |
multi fate stem cell | 7.59e-11 | 91 |
oligodendrocyte | 1.23e-09 | 6 |
macroglial cell | 1.23e-09 | 6 |
astrocyte | 1.23e-09 | 6 |
motile cell | 9.57e-09 | 54 |
monopoietic cell | 6.02e-08 | 4 |
myeloid leukocyte | 6.02e-08 | 4 |
phagocyte | 6.02e-08 | 4 |
monocyte | 6.02e-08 | 4 |
macrophage | 6.02e-08 | 4 |
tissue-resident macrophage | 6.02e-08 | 4 |
macrophage dendritic cell progenitor | 6.02e-08 | 4 |
monoblast | 6.02e-08 | 4 |
promonocyte | 6.02e-08 | 4 |
electrically responsive cell | 7.76e-08 | 39 |
electrically active cell | 7.76e-08 | 39 |
mesodermal cell | 7.96e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.50e-12 | 75 |
gray matter | 1.07e-11 | 34 |
central nervous system | 1.71e-11 | 73 |
occipital lobe | 4.40e-11 | 10 |
visual cortex | 4.40e-11 | 10 |
neocortex | 4.40e-11 | 10 |
regional part of nervous system | 2.43e-10 | 54 |
ectoderm-derived structure | 2.74e-09 | 95 |
ectoderm | 2.74e-09 | 95 |
presumptive ectoderm | 2.74e-09 | 95 |
regional part of cerebral cortex | 7.19e-09 | 17 |
brain grey matter | 2.21e-08 | 29 |
regional part of telencephalon | 2.21e-08 | 29 |
telencephalon | 2.21e-08 | 29 |
neural tube | 8.61e-08 | 52 |
neural rod | 8.61e-08 | 52 |
future spinal cord | 8.61e-08 | 52 |
neural keel | 8.61e-08 | 52 |
neurectoderm | 6.19e-07 | 64 |
neural plate | 6.19e-07 | 64 |
presumptive neural plate | 6.19e-07 | 64 |
musculoskeletal system | 9.50e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.