FFCP PHASE1:Mm9::chr4:41587002..41587016,-: Difference between revisions
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|id=chr4:41587002..41587016,- | |id=chr4:41587002..41587016,- | ||
|ontology_enrichment_celltype=CL:0000221!2.76e-10!44;CL:0000133!2.76e-10!44;CL:0002319!7.45e-10!43;CL:0000540!1.14e-07!33;CL:0000047!1.14e-07!33;CL:0000031!1.14e-07!33;CL:0000404!1.14e-07!33;CL:0000055!1.61e-07!50;CL:0000117!5.31e-07!23;CL:0000337!5.31e-07!23 | |ontology_enrichment_celltype=CL:0000221!2.76e-10!44;CL:0000133!2.76e-10!44;CL:0002319!7.45e-10!43;CL:0000540!1.14e-07!33;CL:0000047!1.14e-07!33;CL:0000031!1.14e-07!33;CL:0000404!1.14e-07!33;CL:0000055!1.61e-07!50;CL:0000117!5.31e-07!23;CL:0000337!5.31e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.19e-10,44;CL:0000133,3.19e-10,44;CL:0002319,8.89e-10,43;CL:0000540,1.28e-07,33;CL:0000047,1.28e-07,33;CL:0000031,1.28e-07,33;CL:0000404,1.28e-07,33;CL:0000117,7.08e-07,23;CL:0000337,7.08e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.80e-22!73;UBERON:0005743!3.80e-22!73;UBERON:0000073!9.79e-21!75;UBERON:0001016!9.79e-21!75;UBERON:0001049!9.44e-16!52;UBERON:0005068!9.44e-16!52;UBERON:0006241!9.44e-16!52;UBERON:0007135!9.44e-16!52;UBERON:0004121!1.37e-15!102;UBERON:0000924!1.37e-15!102;UBERON:0006601!1.37e-15!102;UBERON:0000955!6.61e-15!50;UBERON:0006238!6.61e-15!50;UBERON:0002616!2.50e-14!49;UBERON:0000033!2.36e-13!63;UBERON:0002346!3.07e-12!71;UBERON:0003075!3.07e-12!71;UBERON:0007284!3.07e-12!71;UBERON:0002020!1.16e-11!34;UBERON:0004111!5.37e-10!122;UBERON:0003080!1.50e-09!40;UBERON:0002791!2.90e-09!29;UBERON:0003528!2.90e-09!29;UBERON:0001893!2.90e-09!29;UBERON:0000025!3.09e-09!114;UBERON:0002780!5.15e-09!39;UBERON:0001890!5.15e-09!39;UBERON:0006240!5.15e-09!39;UBERON:0003056!1.88e-08!49;UBERON:0003076!8.79e-08!12;UBERON:0003057!8.79e-08!12;UBERON:0002619!7.66e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!3.80e-22!73;UBERON:0005743!3.80e-22!73;UBERON:0000073!9.79e-21!75;UBERON:0001016!9.79e-21!75;UBERON:0001049!9.44e-16!52;UBERON:0005068!9.44e-16!52;UBERON:0006241!9.44e-16!52;UBERON:0007135!9.44e-16!52;UBERON:0004121!1.37e-15!102;UBERON:0000924!1.37e-15!102;UBERON:0006601!1.37e-15!102;UBERON:0000955!6.61e-15!50;UBERON:0006238!6.61e-15!50;UBERON:0002616!2.50e-14!49;UBERON:0000033!2.36e-13!63;UBERON:0002346!3.07e-12!71;UBERON:0003075!3.07e-12!71;UBERON:0007284!3.07e-12!71;UBERON:0002020!1.16e-11!34;UBERON:0004111!5.37e-10!122;UBERON:0003080!1.50e-09!40;UBERON:0002791!2.90e-09!29;UBERON:0003528!2.90e-09!29;UBERON:0001893!2.90e-09!29;UBERON:0000025!3.09e-09!114;UBERON:0002780!5.15e-09!39;UBERON:0001890!5.15e-09!39;UBERON:0006240!5.15e-09!39;UBERON:0003056!1.88e-08!49;UBERON:0003076!8.79e-08!12;UBERON:0003057!8.79e-08!12;UBERON:0002619!7.66e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.02e-22,73;UBERON:0001016,4.18e-21,75;UBERON:0000073,3.37e-17,54;UBERON:0001049,5.08e-16,52;UBERON:0005068,5.08e-16,52;UBERON:0006241,5.08e-16,52;UBERON:0007135,5.08e-16,52;UBERON:0004121,6.33e-16,95;UBERON:0000924,6.33e-16,95;UBERON:0006601,6.33e-16,95;UBERON:0002346,9.40e-14,64;UBERON:0003075,9.40e-14,64;UBERON:0007284,9.40e-14,64;UBERON:0000955,2.42e-13,47;UBERON:0006238,2.42e-13,47;UBERON:0002616,9.21e-13,46;UBERON:0002020,1.02e-11,34;UBERON:0010371,1.24e-11,73;UBERON:0003080,1.41e-09,40;UBERON:0003528,3.16e-09,29;UBERON:0002791,3.16e-09,29;UBERON:0001893,3.16e-09,29;UBERON:0002780,5.05e-09,39;UBERON:0001890,5.05e-09,39;UBERON:0006240,5.05e-09,39;UBERON:0004111,1.61e-08,122;UBERON:0003056,2.24e-08,49;UBERON:0000025,4.16e-08,114;UBERON:0003076,4.26e-08,12;UBERON:0003057,4.26e-08,12;UBERON:0011216,4.10e-07,194;UBERON:0002619,4.13e-07,17 | |||
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| ||
|short_description=p1@Enho | |short_description=p1@Enho | ||
}} | }} |
Revision as of 11:20, 14 November 2012
Short description: | p1@Enho |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Enho_5end |
Coexpression cluster: | MCL_coexpression_mm9:747 |
Association with transcript: | 318bp_to_NM_027147, uc008sjd.2_5end |
EntrezGene: | Enho |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.19e-10 | 44 |
neurectodermal cell | 3.19e-10 | 44 |
neural cell | 8.89e-10 | 43 |
neuron | 1.28e-07 | 33 |
neuronal stem cell | 1.28e-07 | 33 |
neuroblast | 1.28e-07 | 33 |
electrically signaling cell | 1.28e-07 | 33 |
CNS neuron (sensu Vertebrata) | 7.08e-07 | 23 |
neuroblast (sensu Vertebrata) | 7.08e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.02e-22 | 73 |
nervous system | 4.18e-21 | 75 |
regional part of nervous system | 3.37e-17 | 54 |
neural tube | 5.08e-16 | 52 |
neural rod | 5.08e-16 | 52 |
future spinal cord | 5.08e-16 | 52 |
neural keel | 5.08e-16 | 52 |
ectoderm-derived structure | 6.33e-16 | 95 |
ectoderm | 6.33e-16 | 95 |
presumptive ectoderm | 6.33e-16 | 95 |
neurectoderm | 9.40e-14 | 64 |
neural plate | 9.40e-14 | 64 |
presumptive neural plate | 9.40e-14 | 64 |
brain | 2.42e-13 | 47 |
future brain | 2.42e-13 | 47 |
regional part of brain | 9.21e-13 | 46 |
gray matter | 1.02e-11 | 34 |
ecto-epithelium | 1.24e-11 | 73 |
anterior neural tube | 1.41e-09 | 40 |
brain grey matter | 3.16e-09 | 29 |
regional part of telencephalon | 3.16e-09 | 29 |
telencephalon | 3.16e-09 | 29 |
regional part of forebrain | 5.05e-09 | 39 |
forebrain | 5.05e-09 | 39 |
future forebrain | 5.05e-09 | 39 |
anatomical conduit | 1.61e-08 | 122 |
pre-chordal neural plate | 2.24e-08 | 49 |
tube | 4.16e-08 | 114 |
posterior neural tube | 4.26e-08 | 12 |
chordal neural plate | 4.26e-08 | 12 |
organ system subdivision | 4.10e-07 | 194 |
regional part of cerebral cortex | 4.13e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.