Personal tools

FFCP PHASE1:Mm9::chr13:8202168..8202181,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr13:8202168..8202181,+
|id=chr13:8202168..8202181,+
|ontology_enrichment_celltype=CL:0000540!5.44e-15!33;CL:0000047!5.44e-15!33;CL:0000031!5.44e-15!33;CL:0000404!5.44e-15!33;CL:0000117!6.77e-15!23;CL:0000337!6.77e-15!23;CL:0000393!9.71e-11!39;CL:0000211!9.71e-11!39;CL:0000221!4.75e-09!44;CL:0000133!4.75e-09!44;CL:0002319!1.17e-08!43
|ontology_enrichment_celltype=CL:0000540!5.44e-15!33;CL:0000047!5.44e-15!33;CL:0000031!5.44e-15!33;CL:0000404!5.44e-15!33;CL:0000117!6.77e-15!23;CL:0000337!6.77e-15!23;CL:0000393!9.71e-11!39;CL:0000211!9.71e-11!39;CL:0000221!4.75e-09!44;CL:0000133!4.75e-09!44;CL:0002319!1.17e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.78e-15,23;CL:0000337,2.78e-15,23;CL:0000540,5.92e-13,33;CL:0000047,5.92e-13,33;CL:0000031,5.92e-13,33;CL:0000404,5.92e-13,33;CL:0000393,7.84e-10,39;CL:0000211,7.84e-10,39;CL:0000221,9.25e-09,44;CL:0000133,9.25e-09,44;CL:0002319,2.86e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.12e-26!73;UBERON:0005743!1.12e-26!73;UBERON:0000073!3.06e-25!75;UBERON:0001016!3.06e-25!75;UBERON:0002346!6.41e-25!71;UBERON:0003075!6.41e-25!71;UBERON:0007284!6.41e-25!71;UBERON:0000033!8.23e-25!63;UBERON:0004121!3.18e-24!102;UBERON:0000924!3.18e-24!102;UBERON:0006601!3.18e-24!102;UBERON:0001049!6.13e-23!52;UBERON:0005068!6.13e-23!52;UBERON:0006241!6.13e-23!52;UBERON:0007135!6.13e-23!52;UBERON:0000955!2.38e-22!50;UBERON:0006238!2.38e-22!50;UBERON:0002616!1.85e-21!49;UBERON:0003056!4.16e-21!49;UBERON:0002020!2.47e-19!34;UBERON:0003080!6.71e-18!40;UBERON:0002780!3.32e-17!39;UBERON:0001890!3.32e-17!39;UBERON:0006240!3.32e-17!39;UBERON:0002791!7.16e-16!29;UBERON:0003528!7.16e-16!29;UBERON:0001893!7.16e-16!29;UBERON:0000153!1.29e-12!94;UBERON:0007811!1.31e-12!86;UBERON:0000956!2.31e-10!21;UBERON:0001869!2.31e-10!21;UBERON:0000203!2.31e-10!21;UBERON:0002619!3.10e-09!17;UBERON:0002021!1.11e-08!10;UBERON:0000411!1.11e-08!10;UBERON:0001950!1.11e-08!10;UBERON:0002420!6.18e-07!8;UBERON:0007245!6.18e-07!8;UBERON:0010009!6.18e-07!8;UBERON:0010011!6.18e-07!8;UBERON:0000454!6.18e-07!8
|ontology_enrichment_uberon=UBERON:0001017!1.12e-26!73;UBERON:0005743!1.12e-26!73;UBERON:0000073!3.06e-25!75;UBERON:0001016!3.06e-25!75;UBERON:0002346!6.41e-25!71;UBERON:0003075!6.41e-25!71;UBERON:0007284!6.41e-25!71;UBERON:0000033!8.23e-25!63;UBERON:0004121!3.18e-24!102;UBERON:0000924!3.18e-24!102;UBERON:0006601!3.18e-24!102;UBERON:0001049!6.13e-23!52;UBERON:0005068!6.13e-23!52;UBERON:0006241!6.13e-23!52;UBERON:0007135!6.13e-23!52;UBERON:0000955!2.38e-22!50;UBERON:0006238!2.38e-22!50;UBERON:0002616!1.85e-21!49;UBERON:0003056!4.16e-21!49;UBERON:0002020!2.47e-19!34;UBERON:0003080!6.71e-18!40;UBERON:0002780!3.32e-17!39;UBERON:0001890!3.32e-17!39;UBERON:0006240!3.32e-17!39;UBERON:0002791!7.16e-16!29;UBERON:0003528!7.16e-16!29;UBERON:0001893!7.16e-16!29;UBERON:0000153!1.29e-12!94;UBERON:0007811!1.31e-12!86;UBERON:0000956!2.31e-10!21;UBERON:0001869!2.31e-10!21;UBERON:0000203!2.31e-10!21;UBERON:0002619!3.10e-09!17;UBERON:0002021!1.11e-08!10;UBERON:0000411!1.11e-08!10;UBERON:0001950!1.11e-08!10;UBERON:0002420!6.18e-07!8;UBERON:0007245!6.18e-07!8;UBERON:0010009!6.18e-07!8;UBERON:0010011!6.18e-07!8;UBERON:0000454!6.18e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.41e-28,64;UBERON:0003075,2.41e-28,64;UBERON:0007284,2.41e-28,64;UBERON:0001017,5.59e-28,73;UBERON:0000073,2.02e-27,54;UBERON:0001016,8.76e-27,75;UBERON:0001049,1.21e-24,52;UBERON:0005068,1.21e-24,52;UBERON:0006241,1.21e-24,52;UBERON:0007135,1.21e-24,52;UBERON:0004121,1.40e-24,95;UBERON:0000924,1.40e-24,95;UBERON:0006601,1.40e-24,95;UBERON:0010371,4.17e-24,73;UBERON:0002020,2.78e-22,34;UBERON:0000955,1.79e-20,47;UBERON:0006238,1.79e-20,47;UBERON:0002616,2.29e-19,46;UBERON:0003056,9.81e-19,49;UBERON:0003528,1.49e-17,29;UBERON:0002791,1.49e-17,29;UBERON:0001893,1.49e-17,29;UBERON:0003080,2.95e-17,40;UBERON:0002780,2.27e-16,39;UBERON:0001890,2.27e-16,39;UBERON:0006240,2.27e-16,39;UBERON:0010314,6.33e-16,92;UBERON:0002619,9.27e-12,17;UBERON:0002021,1.13e-11,10;UBERON:0000411,1.13e-11,10;UBERON:0001950,1.13e-11,10;UBERON:0000956,3.30e-10,21;UBERON:0001869,3.30e-10,21;UBERON:0000203,3.30e-10,21;UBERON:0002420,3.35e-09,8;UBERON:0007245,3.35e-09,8;UBERON:0010009,3.35e-09,8;UBERON:0010011,3.35e-09,8;UBERON:0000454,3.35e-09,8;UBERON:0003076,4.72e-08,12;UBERON:0003057,4.72e-08,12
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.420649922702764,2.57085885963423,3.97563373712904,3.1847607795888,2.97120960156533,0.919218786610021,7.70811166995721,18.2592893461818,14.2854075928306,3.69281605644543,2.8361169516747,3.12548022334056,4.18774498502071,7.87867654044352,9.32069311438542,4.41942878210502,7.68807076315156,4.47358669980721,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0.647067399789637,0.220841518460394,0,0,2.92780797011547,5.44561437714983,0,0,0,0,4.49371918214468,3.66000482254901,8.79580464790051,5.38855392596057,4.85859368927628,8.10373373782284,9.5722345209977,0,0.248813941220186,0,0.631325567659422,0.520481771850815,0.459804208866946,1.26043490863744,1.05493372485001,1.49680298132921,2.562274405697,2.52994656311268,1.29351685369508,0,0.945530400839096,1.23165786914764,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9350773253346,2.6755199218614,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,4.80567915028033,0,0,1.26203287766503,2.34263246577983,2.36965737506079,0,0,0.283076530788832,0.404810701674894,1.16902343164525,0.790575555893047,28.5975971615408,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,2.38307724027652,0.540183282093931,0.258717367565509,1.50035924522115,0.532020700926821,0,0.493647061806363,0,0,0,5.51320995137405,0,0.161464426695906,0.361877549568935,0.358117032009409,0.164140899745061,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.93841237725591,0,0,1.50471631210609,3.3885110557024,7.36520378411483,4.01026859407578,4.98374228796694,7.53590771747707,6.0431511791176,5.40018000185445,5.40385443869065,7.25027854374727,5.1776031175182,0.31136204275253,1.19707462020309,1.87806966329548,1.70174701947806,0.838452650511929,0.551530525350042,2.44471400581777,1.44224540067226,1.28367683836726,2.02157769411038,1.52087579934144,2.64076877940507,1.591905626988,1.85672941974121,1.95280594449085,0.476293691283074,1.97003354106254,1.73618298417335,1.23625770240992,1.76638704161277,0,1.77475806159337,2.14592570952589,1.59881058295561,2.1645157495526,1.35383372626682,1.82927972872773,1.57841826862706,2.17286582153379,0.561142271657738,1.18635018124174,1.37906275325789,2.45538625901814,1.54936841185966,1.15743966588685,2.24829520144151,1.40358965067245,0.214871054048298,0.956441660344217,0.220591419119515,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.420649922702764,2.57085885963423,3.97563373712904,3.1847607795888,2.97120960156533,0.919218786610021,7.70811166995721,18.2592893461818,14.2854075928306,3.69281605644543,2.8361169516747,3.12548022334056,4.18774498502071,7.87867654044352,9.32069311438542,4.41942878210502,7.68807076315156,4.47358669980721,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0.647067399789637,0.220841518460394,0,0,2.92780797011547,5.44561437714983,0,0,0,0,4.49371918214468,3.66000482254901,8.79580464790051,5.38855392596057,4.85859368927628,8.10373373782284,9.5722345209977,0,0.248813941220186,0,0.631325567659422,0.520481771850815,0.459804208866946,1.26043490863744,1.05493372485001,1.49680298132921,2.562274405697,2.52994656311268,1.29351685369508,0,0.945530400839096,1.23165786914764,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9350773253346,2.6755199218614,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,4.80567915028033,0,0,1.26203287766503,2.34263246577983,2.36965737506079,0,0,0.283076530788832,0.404810701674894,1.16902343164525,0.790575555893047,28.5975971615408,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,2.38307724027652,0.540183282093931,0.258717367565509,1.50035924522115,0.532020700926821,0,0.493647061806363,0,0,0,5.51320995137405,0,0.161464426695906,0.361877549568935,0.358117032009409,0.164140899745061,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.93841237725591,0,0,1.50471631210609,3.3885110557024,7.36520378411483,4.01026859407578,4.98374228796694,7.53590771747707,6.0431511791176,5.40018000185445,5.40385443869065,7.25027854374727,5.1776031175182,0.31136204275253,1.19707462020309,1.87806966329548,1.70174701947806,0.838452650511929,0.551530525350042,2.44471400581777,1.44224540067226,1.28367683836726,2.02157769411038,1.52087579934144,2.64076877940507,1.591905626988,1.85672941974121,1.95280594449085,0.476293691283074,1.97003354106254,1.73618298417335,1.23625770240992,1.76638704161277,0,1.77475806159337,2.14592570952589,1.59881058295561,2.1645157495526,1.35383372626682,1.82927972872773,1.57841826862706,2.17286582153379,0.561142271657738,1.18635018124174,1.37906275325789,2.45538625901814,1.54936841185966,1.15743966588685,2.24829520144151,1.40358965067245,0.214871054048298,0.956441660344217,0.220591419119515,0.231867835620421
|short_description=p2@Adarb2
|short_description=p2@Adarb2
}}
}}

Revision as of 19:10, 14 November 2012

Short description:p2@Adarb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Adarb2_5end
Coexpression cluster:MCL_coexpression_mm9:2875
Association with transcript: 0bp_to_ENSMUST00000123187_5end
EntrezGene:Adarb2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Adarb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F18.80
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E810.94
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A34.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I928.60
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.78e-1523
neuroblast (sensu Vertebrata)2.78e-1523
neuron5.92e-1333
neuronal stem cell5.92e-1333
neuroblast5.92e-1333
electrically signaling cell5.92e-1333
electrically responsive cell7.84e-1039
electrically active cell7.84e-1039
ectodermal cell9.25e-0944
neurectodermal cell9.25e-0944
neural cell2.86e-0843

Uber anatomy
Ontology termp-valuen
neurectoderm2.41e-2864
neural plate2.41e-2864
presumptive neural plate2.41e-2864
central nervous system5.59e-2873
regional part of nervous system2.02e-2754
nervous system8.76e-2775
neural tube1.21e-2452
neural rod1.21e-2452
future spinal cord1.21e-2452
neural keel1.21e-2452
ectoderm-derived structure1.40e-2495
ectoderm1.40e-2495
presumptive ectoderm1.40e-2495
ecto-epithelium4.17e-2473
gray matter2.78e-2234
brain1.79e-2047
future brain1.79e-2047
regional part of brain2.29e-1946
pre-chordal neural plate9.81e-1949
brain grey matter1.49e-1729
regional part of telencephalon1.49e-1729
telencephalon1.49e-1729
anterior neural tube2.95e-1740
regional part of forebrain2.27e-1639
forebrain2.27e-1639
future forebrain2.27e-1639
structure with developmental contribution from neural crest6.33e-1692
regional part of cerebral cortex9.27e-1217
occipital lobe1.13e-1110
visual cortex1.13e-1110
neocortex1.13e-1110
cerebral cortex3.30e-1021
cerebral hemisphere3.30e-1021
pallium3.30e-1021
basal ganglion3.35e-098
nuclear complex of neuraxis3.35e-098
aggregate regional part of brain3.35e-098
collection of basal ganglia3.35e-098
cerebral subcortex3.35e-098
posterior neural tube4.72e-0812
chordal neural plate4.72e-0812







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:8202168..8202181,%2B&oldid=2336933"