FFCP PHASE1:Hg19::chr8:82355027..82355036,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.66e-23;3!UBERON:0003057;3.66e-23;3 | |ontology_enrichment_development_v019=UBERON:0006241;3.66e-23;3!UBERON:0003057;3.66e-23;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.46e-61!57;UBERON:0005068!5.46e-61!57;UBERON:0006241!5.46e-61!57;UBERON:0007135!5.46e-61!57;UBERON:0002616!4.54e-49!59;UBERON:0001017!7.80e-48!82;UBERON:0007023!1.27e-45!115;UBERON:0005743!1.99e-45!86;UBERON:0000955!1.57e-44!69;UBERON:0006238!1.57e-44!69;UBERON:0003075!1.70e-42!86;UBERON:0007284!1.70e-42!86;UBERON:0002308!3.64e-42!9;UBERON:0000125!3.64e-42!9;UBERON:0002020!3.09e-41!34;UBERON:0003528!3.09e-41!34;UBERON:0000073!9.71e-41!94;UBERON:0001016!9.71e-41!94;UBERON:0002346!2.09e-40!90;UBERON:0002780!4.68e-38!41;UBERON:0001890!4.68e-38!41;UBERON:0006240!4.68e-38!41;UBERON:0002298!2.58e-37!8;UBERON:0003080!4.33e-37!42;UBERON:0001893!1.05e-35!34;UBERON:0001869!5.71e-33!32;UBERON:0002791!4.45e-32!33;UBERON:0002420!7.18e-32!9;UBERON:0007245!7.18e-32!9;UBERON:0010009!7.18e-32!9;UBERON:0010011!7.18e-32!9;UBERON:0000454!7.18e-32!9;UBERON:0009663!2.06e-30!7;UBERON:0000033!7.00e-28!123;UBERON:0000153!2.26e-26!129;UBERON:0007811!2.26e-26!129;UBERON:0003076!1.20e-25!15;UBERON:0003057!1.20e-25!15;UBERON:0003056!1.20e-24!61;UBERON:0004121!1.37e-22!169;UBERON:0000924!5.89e-22!173;UBERON:0006601!5.89e-22!173;UBERON:0006331!1.48e-19!3;UBERON:0000349!1.49e-19!5;UBERON:0001896!1.90e-19!3;UBERON:0005290!1.90e-19!3;UBERON:0010096!1.90e-19!3;UBERON:0000988!2.43e-19!3;UBERON:0004733!2.95e-18!12;UBERON:0002028!2.95e-18!12;UBERON:0007277!2.95e-18!12;UBERON:0004732!8.22e-17!13;UBERON:0000025!3.60e-16!194;UBERON:0002619!6.85e-16!22;UBERON:0000956!6.36e-14!25;UBERON:0000203!6.36e-14!25;UBERON:0000369!7.76e-14!4;UBERON:0002435!7.76e-14!4;UBERON:0000204!7.76e-14!4;UBERON:0010082!7.76e-14!4;UBERON:0002148!8.58e-14!2;UBERON:0009662!8.58e-14!2;UBERON:0001954!2.06e-13!2;UBERON:0003022!2.06e-13!2;UBERON:0002421!2.06e-13!2;UBERON:0002600!2.06e-13!2;UBERON:0001875!2.49e-13!2;UBERON:0006514!2.49e-13!2;UBERON:0004111!2.88e-13!241;UBERON:0000477!1.96e-11!286;UBERON:0000064!5.28e-10!219;UBERON:0001950!5.76e-10!20;UBERON:0000200!1.58e-09!6;UBERON:0002240!1.60e-09!3;UBERON:0000483!3.56e-09!309;UBERON:0002771!4.68e-09!3;UBERON:0000119!4.91e-09!312;UBERON:0005383!6.74e-09!3;UBERON:0005382!6.74e-09!3;UBERON:0000475!1.54e-08!365;UBERON:0002079!9.71e-08!1;UBERON:0003112!1.61e-07!1;UBERON:0000032!1.61e-07!1;UBERON:0005253!1.61e-07!1;UBERON:0003128!1.61e-07!1;UBERON:0002241!1.61e-07!1;UBERON:0001703!1.61e-07!1;UBERON:0004761!1.61e-07!1;UBERON:0009617!1.61e-07!1;UBERON:0002038!1.72e-07!1;UBERON:0009661!1.72e-07!1;UBERON:0001874!2.21e-07!1;UBERON:0001871!2.35e-07!7;UBERON:0007190!4.34e-07!1;UBERON:0001882!4.61e-07!1;UBERON:0005403!4.61e-07!1;UBERON:0002680!9.19e-07!9;UBERON:0001895!9.19e-07!9;UBERON:0010092!9.19e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!5.46e-61!57;UBERON:0005068!5.46e-61!57;UBERON:0006241!5.46e-61!57;UBERON:0007135!5.46e-61!57;UBERON:0002616!4.54e-49!59;UBERON:0001017!7.80e-48!82;UBERON:0007023!1.27e-45!115;UBERON:0005743!1.99e-45!86;UBERON:0000955!1.57e-44!69;UBERON:0006238!1.57e-44!69;UBERON:0003075!1.70e-42!86;UBERON:0007284!1.70e-42!86;UBERON:0002308!3.64e-42!9;UBERON:0000125!3.64e-42!9;UBERON:0002020!3.09e-41!34;UBERON:0003528!3.09e-41!34;UBERON:0000073!9.71e-41!94;UBERON:0001016!9.71e-41!94;UBERON:0002346!2.09e-40!90;UBERON:0002780!4.68e-38!41;UBERON:0001890!4.68e-38!41;UBERON:0006240!4.68e-38!41;UBERON:0002298!2.58e-37!8;UBERON:0003080!4.33e-37!42;UBERON:0001893!1.05e-35!34;UBERON:0001869!5.71e-33!32;UBERON:0002791!4.45e-32!33;UBERON:0002420!7.18e-32!9;UBERON:0007245!7.18e-32!9;UBERON:0010009!7.18e-32!9;UBERON:0010011!7.18e-32!9;UBERON:0000454!7.18e-32!9;UBERON:0009663!2.06e-30!7;UBERON:0000033!7.00e-28!123;UBERON:0000153!2.26e-26!129;UBERON:0007811!2.26e-26!129;UBERON:0003076!1.20e-25!15;UBERON:0003057!1.20e-25!15;UBERON:0003056!1.20e-24!61;UBERON:0004121!1.37e-22!169;UBERON:0000924!5.89e-22!173;UBERON:0006601!5.89e-22!173;UBERON:0006331!1.48e-19!3;UBERON:0000349!1.49e-19!5;UBERON:0001896!1.90e-19!3;UBERON:0005290!1.90e-19!3;UBERON:0010096!1.90e-19!3;UBERON:0000988!2.43e-19!3;UBERON:0004733!2.95e-18!12;UBERON:0002028!2.95e-18!12;UBERON:0007277!2.95e-18!12;UBERON:0004732!8.22e-17!13;UBERON:0000025!3.60e-16!194;UBERON:0002619!6.85e-16!22;UBERON:0000956!6.36e-14!25;UBERON:0000203!6.36e-14!25;UBERON:0000369!7.76e-14!4;UBERON:0002435!7.76e-14!4;UBERON:0000204!7.76e-14!4;UBERON:0010082!7.76e-14!4;UBERON:0002148!8.58e-14!2;UBERON:0009662!8.58e-14!2;UBERON:0001954!2.06e-13!2;UBERON:0003022!2.06e-13!2;UBERON:0002421!2.06e-13!2;UBERON:0002600!2.06e-13!2;UBERON:0001875!2.49e-13!2;UBERON:0006514!2.49e-13!2;UBERON:0004111!2.88e-13!241;UBERON:0000477!1.96e-11!286;UBERON:0000064!5.28e-10!219;UBERON:0001950!5.76e-10!20;UBERON:0000200!1.58e-09!6;UBERON:0002240!1.60e-09!3;UBERON:0000483!3.56e-09!309;UBERON:0002771!4.68e-09!3;UBERON:0000119!4.91e-09!312;UBERON:0005383!6.74e-09!3;UBERON:0005382!6.74e-09!3;UBERON:0000475!1.54e-08!365;UBERON:0002079!9.71e-08!1;UBERON:0003112!1.61e-07!1;UBERON:0000032!1.61e-07!1;UBERON:0005253!1.61e-07!1;UBERON:0003128!1.61e-07!1;UBERON:0002241!1.61e-07!1;UBERON:0001703!1.61e-07!1;UBERON:0004761!1.61e-07!1;UBERON:0009617!1.61e-07!1;UBERON:0002038!1.72e-07!1;UBERON:0009661!1.72e-07!1;UBERON:0001874!2.21e-07!1;UBERON:0001871!2.35e-07!7;UBERON:0007190!4.34e-07!1;UBERON:0001882!4.61e-07!1;UBERON:0005403!4.61e-07!1;UBERON:0002680!9.19e-07!9;UBERON:0001895!9.19e-07!9;UBERON:0010092!9.19e-07!9 | ||
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|short_description=p5@PMP2 | |short_description=p5@PMP2 | ||
}} | }} |
Revision as of 02:01, 17 November 2012
Short description: | p5@PMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PMP2_5end |
Coexpression cluster: | C1033_locus_medulla_spinal_globus_amygdala_pineal_hippocampus |
Association with transcript: | 333bp_to_DQ786226_5end |
EntrezGene: | PMP2 |
HGNC: | 9117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brainstem | 1.22e-44 | 6 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
locus ceruleus | 3.61e-34 | 2 |
brainstem nucleus | 3.61e-34 | 2 |
hindbrain nucleus | 3.61e-34 | 2 |
pons | 2.62e-23 | 3 |
spinal cord | 3.27e-23 | 3 |
dorsal region element | 3.27e-23 | 3 |
dorsum | 3.27e-23 | 3 |
medulla oblongata | 4.09e-23 | 3 |
myelencephalon | 4.09e-23 | 3 |
future myelencephalon | 4.09e-23 | 3 |
segmental subdivision of hindbrain | 5.14e-23 | 12 |
hindbrain | 5.14e-23 | 12 |
presumptive hindbrain | 5.14e-23 | 12 |
segmental subdivision of nervous system | 2.40e-21 | 13 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
regional part of metencephalon | 1.04e-08 | 9 |
neural nucleus | 1.04e-08 | 9 |
nucleus of brain | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.