FFCP PHASE1:Hg19::chr5:140208087..140208126,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002322!1.89e-07!5 | |ontology_enrichment_celltype=CL:0002322!1.89e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.23e-17;5!CL:0002321;3.47e-10;15!CL:0002149;6.48e-07;6!CL:0002255;6.48e-07;6 | |ontology_enrichment_celltype_v019=CL:0000333;1.23e-17;5!CL:0002321;3.47e-10;15!CL:0002149;6.48e-07;6!CL:0002255;6.48e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,7.75e-07,6;CL:0002255,7.75e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.42e-15;10!DOID:169;8.52e-15;6!DOID:3095;1.66e-10;22!DOID:2994;1.66e-10;22!DOID:6193;2.38e-10;1!DOID:3001;6.48e-07;6 | |ontology_enrichment_disease_v019=DOID:171;2.42e-15;10!DOID:169;8.52e-15;6!DOID:3095;1.66e-10;22!DOID:2994;1.66e-10;22!DOID:6193;2.38e-10;1!DOID:3001;6.48e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:171,2.51e-15,10;DOID:169,9.15e-15,6;DOID:3095,1.61e-10,22;DOID:2994,1.61e-10,22;DOID:6193,4.33e-10,1;DOID:3001,7.75e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.79e-55!57;UBERON:0005068!2.79e-55!57;UBERON:0006241!2.79e-55!57;UBERON:0007135!2.79e-55!57;UBERON:0000073!2.80e-54!94;UBERON:0001016!2.80e-54!94;UBERON:0001017!1.53e-49!82;UBERON:0005743!1.18e-48!86;UBERON:0002616!1.02e-47!59;UBERON:0002780!4.35e-46!41;UBERON:0001890!4.35e-46!41;UBERON:0006240!4.35e-46!41;UBERON:0003080!8.82e-45!42;UBERON:0000955!2.98e-43!69;UBERON:0006238!2.98e-43!69;UBERON:0002346!8.56e-42!90;UBERON:0003075!4.97e-40!86;UBERON:0007284!4.97e-40!86;UBERON:0001893!6.22e-36!34;UBERON:0002020!1.31e-35!34;UBERON:0003528!1.31e-35!34;UBERON:0002791!5.43e-34!33;UBERON:0001869!9.67e-33!32;UBERON:0003056!7.49e-30!61;UBERON:0007023!1.04e-29!115;UBERON:0000924!8.32e-28!173;UBERON:0006601!8.32e-28!173;UBERON:0002619!4.01e-27!22;UBERON:0001950!8.48e-27!20;UBERON:0004121!3.18e-26!169;UBERON:0000956!2.22e-23!25;UBERON:0000203!2.22e-23!25;UBERON:0000033!1.16e-21!123;UBERON:0000153!4.21e-20!129;UBERON:0007811!4.21e-20!129;UBERON:0002308!5.23e-14!9;UBERON:0000125!5.23e-14!9;UBERON:0000200!1.87e-13!6;UBERON:0000025!1.06e-11!194;UBERON:0001894!1.20e-11!7;UBERON:0006222!1.20e-11!7;UBERON:0003076!1.60e-11!15;UBERON:0003057!1.60e-11!15;UBERON:0002420!6.25e-11!9;UBERON:0007245!6.25e-11!9;UBERON:0010009!6.25e-11!9;UBERON:0010011!6.25e-11!9;UBERON:0000454!6.25e-11!9;UBERON:0009663!8.79e-11!7;UBERON:0003296!5.69e-10!4;UBERON:0010133!5.69e-10!4;UBERON:0004733!1.44e-09!12;UBERON:0002028!1.44e-09!12;UBERON:0007277!1.44e-09!12;UBERON:0000369!1.48e-09!4;UBERON:0002435!1.48e-09!4;UBERON:0000204!1.48e-09!4;UBERON:0010082!1.48e-09!4;UBERON:0001871!5.31e-09!7;UBERON:0004732!1.00e-08!13;UBERON:0002298!1.71e-08!8;UBERON:0004111!2.53e-08!241;UBERON:0001872!8.28e-08!5;UBERON:0005383!1.09e-07!3;UBERON:0005382!1.09e-07!3;UBERON:0002680!1.10e-07!9;UBERON:0001895!1.10e-07!9;UBERON:0010092!1.10e-07!9;UBERON:0002021!1.57e-07!5;UBERON:0000483!4.01e-07!309;UBERON:0002771!4.49e-07!3;UBERON:0000119!6.16e-07!312 | |ontology_enrichment_uberon=UBERON:0001049!2.79e-55!57;UBERON:0005068!2.79e-55!57;UBERON:0006241!2.79e-55!57;UBERON:0007135!2.79e-55!57;UBERON:0000073!2.80e-54!94;UBERON:0001016!2.80e-54!94;UBERON:0001017!1.53e-49!82;UBERON:0005743!1.18e-48!86;UBERON:0002616!1.02e-47!59;UBERON:0002780!4.35e-46!41;UBERON:0001890!4.35e-46!41;UBERON:0006240!4.35e-46!41;UBERON:0003080!8.82e-45!42;UBERON:0000955!2.98e-43!69;UBERON:0006238!2.98e-43!69;UBERON:0002346!8.56e-42!90;UBERON:0003075!4.97e-40!86;UBERON:0007284!4.97e-40!86;UBERON:0001893!6.22e-36!34;UBERON:0002020!1.31e-35!34;UBERON:0003528!1.31e-35!34;UBERON:0002791!5.43e-34!33;UBERON:0001869!9.67e-33!32;UBERON:0003056!7.49e-30!61;UBERON:0007023!1.04e-29!115;UBERON:0000924!8.32e-28!173;UBERON:0006601!8.32e-28!173;UBERON:0002619!4.01e-27!22;UBERON:0001950!8.48e-27!20;UBERON:0004121!3.18e-26!169;UBERON:0000956!2.22e-23!25;UBERON:0000203!2.22e-23!25;UBERON:0000033!1.16e-21!123;UBERON:0000153!4.21e-20!129;UBERON:0007811!4.21e-20!129;UBERON:0002308!5.23e-14!9;UBERON:0000125!5.23e-14!9;UBERON:0000200!1.87e-13!6;UBERON:0000025!1.06e-11!194;UBERON:0001894!1.20e-11!7;UBERON:0006222!1.20e-11!7;UBERON:0003076!1.60e-11!15;UBERON:0003057!1.60e-11!15;UBERON:0002420!6.25e-11!9;UBERON:0007245!6.25e-11!9;UBERON:0010009!6.25e-11!9;UBERON:0010011!6.25e-11!9;UBERON:0000454!6.25e-11!9;UBERON:0009663!8.79e-11!7;UBERON:0003296!5.69e-10!4;UBERON:0010133!5.69e-10!4;UBERON:0004733!1.44e-09!12;UBERON:0002028!1.44e-09!12;UBERON:0007277!1.44e-09!12;UBERON:0000369!1.48e-09!4;UBERON:0002435!1.48e-09!4;UBERON:0000204!1.48e-09!4;UBERON:0010082!1.48e-09!4;UBERON:0001871!5.31e-09!7;UBERON:0004732!1.00e-08!13;UBERON:0002298!1.71e-08!8;UBERON:0004111!2.53e-08!241;UBERON:0001872!8.28e-08!5;UBERON:0005383!1.09e-07!3;UBERON:0005382!1.09e-07!3;UBERON:0002680!1.10e-07!9;UBERON:0001895!1.10e-07!9;UBERON:0010092!1.10e-07!9;UBERON:0002021!1.57e-07!5;UBERON:0000483!4.01e-07!309;UBERON:0002771!4.49e-07!3;UBERON:0000119!6.16e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;4.15e-21;4!UBERON:0010133;4.15e-21;4!UBERON:0001894;5.41e-21;7!UBERON:0000007;2.37e-19;2!UBERON:0000013;1.23e-17;5!UBERON:0002410;1.23e-17;5!UBERON:0002780;2.04e-10;41!UBERON:0001890;2.04e-10;41!UBERON:0007190;2.38e-10;1!UBERON:0000010;4.85e-10;8!UBERON:0002784;5.96e-10;4!UBERON:0000073;7.05e-08;53!UBERON:0002616;7.05e-08;53!UBERON:0000200;6.48e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0003296;4.15e-21;4!UBERON:0010133;4.15e-21;4!UBERON:0001894;5.41e-21;7!UBERON:0000007;2.37e-19;2!UBERON:0000013;1.23e-17;5!UBERON:0002410;1.23e-17;5!UBERON:0002780;2.04e-10;41!UBERON:0001890;2.04e-10;41!UBERON:0007190;2.38e-10;1!UBERON:0000010;4.85e-10;8!UBERON:0002784;5.96e-10;4!UBERON:0000073;7.05e-08;53!UBERON:0002616;7.05e-08;53!UBERON:0000200;6.48e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001894,7.04e-21,7;UBERON:0006222,7.04e-21,7;UBERON:0003296,7.98e-21,4;UBERON:0010133,7.98e-21,4;UBERON:0000007,2.86e-19,2;UBERON:0000013,1.34e-17,5;UBERON:0002410,1.34e-17,5;UBERON:0002780,2.97e-16,41;UBERON:0001890,2.97e-16,41;UBERON:0003080,2.97e-16,41;UBERON:0006240,2.97e-16,41;UBERON:0001016,1.18e-14,89;UBERON:0000073,2.29e-12,53;UBERON:0002616,2.29e-12,53;UBERON:0001049,1.19e-11,56;UBERON:0005068,1.19e-11,56;UBERON:0006241,1.19e-11,56;UBERON:0007135,1.19e-11,56;UBERON:0003056,1.31e-10,61;UBERON:0007190,3.61e-10,1;UBERON:0000010,5.09e-10,8;UBERON:0002784,6.84e-10,4;UBERON:0001017,1.99e-09,81;UBERON:0000955,2.98e-09,68;UBERON:0006238,2.98e-09,68;UBERON:0002346,5.76e-09,86;UBERON:0004121,5.60e-08,171;UBERON:0000924,5.60e-08,171;UBERON:0006601,5.60e-08,171;UBERON:0003075,1.32e-07,82;UBERON:0007284,1.32e-07,82;UBERON:0000200,6.11e-07,6;UBERON:0001869,8.48e-07,32 | |||
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| ||
|short_description=p@chr5:140208087..140208126,- | |short_description=p@chr5:140208087..140208126,- | ||
}} | }} |
Revision as of 18:13, 17 November 2012
Short description: | p@chr5:140208087..140208126, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:140208087..140208126, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 7.75e-07 | 6 |
stromal cell of endometrium | 7.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
diencephalon | 7.04e-21 | 7 |
future diencephalon | 7.04e-21 | 7 |
gland of diencephalon | 7.98e-21 | 4 |
neuroendocrine gland | 7.98e-21 | 4 |
pituitary gland | 2.86e-19 | 2 |
sympathetic nervous system | 1.34e-17 | 5 |
autonomic nervous system | 1.34e-17 | 5 |
regional part of forebrain | 2.97e-16 | 41 |
forebrain | 2.97e-16 | 41 |
anterior neural tube | 2.97e-16 | 41 |
future forebrain | 2.97e-16 | 41 |
nervous system | 1.18e-14 | 89 |
regional part of nervous system | 2.29e-12 | 53 |
regional part of brain | 2.29e-12 | 53 |
neural tube | 1.19e-11 | 56 |
neural rod | 1.19e-11 | 56 |
future spinal cord | 1.19e-11 | 56 |
neural keel | 1.19e-11 | 56 |
pre-chordal neural plate | 1.31e-10 | 61 |
paracentral gyrus | 3.61e-10 | 1 |
peripheral nervous system | 5.09e-10 | 8 |
regional part of diencephalon | 6.84e-10 | 4 |
central nervous system | 1.99e-09 | 81 |
brain | 2.98e-09 | 68 |
future brain | 2.98e-09 | 68 |
neurectoderm | 5.76e-09 | 86 |
ectoderm-derived structure | 5.60e-08 | 171 |
ectoderm | 5.60e-08 | 171 |
presumptive ectoderm | 5.60e-08 | 171 |
neural plate | 1.32e-07 | 82 |
presumptive neural plate | 1.32e-07 | 82 |
gyrus | 6.11e-07 | 6 |
cerebral hemisphere | 8.48e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.51e-15 | 10 |
neuroendocrine tumor | 9.15e-15 | 6 |
germ cell and embryonal cancer | 1.61e-10 | 22 |
germ cell cancer | 1.61e-10 | 22 |
epithelioid sarcoma | 4.33e-10 | 1 |
female reproductive endometrioid cancer | 7.75e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.