FFCP PHASE1:Hg19::chr19:18063075..18063099,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000453!1.07e-09!5;CL:0002322!3.79e-09!5;CL:0000540!4.29e-09!6;CL:0000031!4.29e-09!6;CL:0000404!4.29e-09!6 | |ontology_enrichment_celltype=CL:0000453!1.07e-09!5;CL:0002322!3.79e-09!5;CL:0000540!4.29e-09!6;CL:0000031!4.29e-09!6;CL:0000404!4.29e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.87e-18;5!CL:0002322;2.31e-17;5!CL:0002321;1.99e-13;15!CL:0000990;4.50e-10;8!CL:0001014;2.02e-08;2!CL:0001016;2.02e-08;2!CL:0000451;3.66e-08;10!CL:0000039;4.08e-08;7!CL:0000586;4.08e-08;7!CL:0000123;1.57e-07;2!CL:0000242;1.57e-07;2 | |ontology_enrichment_celltype_v019=CL:0000453;1.87e-18;5!CL:0002322;2.31e-17;5!CL:0002321;1.99e-13;15!CL:0000990;4.50e-10;8!CL:0001014;2.02e-08;2!CL:0001016;2.02e-08;2!CL:0000451;3.66e-08;10!CL:0000039;4.08e-08;7!CL:0000586;4.08e-08;7!CL:0000123;1.57e-07;2!CL:0000242;1.57e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.87e-18,5;CL:0002322,2.57e-17,5;CL:0000990,4.51e-10,8;CL:0001014,2.10e-08,2;CL:0001016,2.10e-08,2;CL:0000451,3.66e-08,10;CL:0000039,4.52e-08,7;CL:0000586,4.52e-08,7;CL:0000242,1.40e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3095!7.70e-09!22;DOID:2994!7.70e-09!22;DOID:171!4.25e-08!10 | |ontology_enrichment_disease=DOID:3095!7.70e-09!22;DOID:2994!7.70e-09!22;DOID:171!4.25e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:3095;7.36e-17;22!DOID:2994;7.36e-17;22!DOID:171;2.74e-16;10 | |ontology_enrichment_disease_v019=DOID:3095;7.36e-17;22!DOID:2994;7.36e-17;22!DOID:171;2.74e-16;10 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,7.57e-17,22;DOID:2994,7.57e-17,22;DOID:171,2.51e-16,10 | |||
|ontology_enrichment_uberon=UBERON:0001950!9.39e-21!20;UBERON:0002619!1.90e-18!22;UBERON:0000956!1.14e-15!25;UBERON:0000203!1.14e-15!25;UBERON:0000073!2.23e-15!94;UBERON:0001016!2.23e-15!94;UBERON:0001017!6.06e-15!82;UBERON:0005743!1.25e-14!86;UBERON:0001893!2.12e-14!34;UBERON:0001869!2.86e-14!32;UBERON:0002780!1.18e-13!41;UBERON:0001890!1.18e-13!41;UBERON:0006240!1.18e-13!41;UBERON:0002791!2.57e-13!33;UBERON:0003080!3.55e-13!42;UBERON:0002020!6.33e-13!34;UBERON:0003528!6.33e-13!34;UBERON:0000955!1.72e-11!69;UBERON:0006238!1.72e-11!69;UBERON:0001049!6.83e-10!57;UBERON:0005068!6.83e-10!57;UBERON:0006241!6.83e-10!57;UBERON:0007135!6.83e-10!57;UBERON:0002616!2.47e-09!59;UBERON:0000200!4.36e-09!6;UBERON:0003056!6.78e-09!61;UBERON:0002346!9.91e-09!90;UBERON:0001872!1.18e-08!5;UBERON:0002021!2.32e-08!5;UBERON:0000924!2.70e-07!173;UBERON:0006601!2.70e-07!173 | |ontology_enrichment_uberon=UBERON:0001950!9.39e-21!20;UBERON:0002619!1.90e-18!22;UBERON:0000956!1.14e-15!25;UBERON:0000203!1.14e-15!25;UBERON:0000073!2.23e-15!94;UBERON:0001016!2.23e-15!94;UBERON:0001017!6.06e-15!82;UBERON:0005743!1.25e-14!86;UBERON:0001893!2.12e-14!34;UBERON:0001869!2.86e-14!32;UBERON:0002780!1.18e-13!41;UBERON:0001890!1.18e-13!41;UBERON:0006240!1.18e-13!41;UBERON:0002791!2.57e-13!33;UBERON:0003080!3.55e-13!42;UBERON:0002020!6.33e-13!34;UBERON:0003528!6.33e-13!34;UBERON:0000955!1.72e-11!69;UBERON:0006238!1.72e-11!69;UBERON:0001049!6.83e-10!57;UBERON:0005068!6.83e-10!57;UBERON:0006241!6.83e-10!57;UBERON:0007135!6.83e-10!57;UBERON:0002616!2.47e-09!59;UBERON:0000200!4.36e-09!6;UBERON:0003056!6.78e-09!61;UBERON:0002346!9.91e-09!90;UBERON:0001872!1.18e-08!5;UBERON:0002021!2.32e-08!5;UBERON:0000924!2.70e-07!173;UBERON:0006601!2.70e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.81e-20;20!UBERON:0002619;8.70e-18;22!UBERON:0001872;3.32e-16;5!UBERON:0000956;1.98e-15;25!UBERON:0000203;1.98e-15;25!UBERON:0002346;1.10e-14;4!UBERON:0000923;1.10e-14;4!UBERON:0010316;1.10e-14;4!UBERON:0005291;1.10e-14;4!UBERON:0000922;1.25e-13;49!UBERON:0001869;6.98e-13;32!UBERON:0001893;5.85e-12;34!UBERON:0002050;9.48e-12;5!UBERON:0005423;9.48e-12;5!UBERON:0002021;8.46e-11;5!UBERON:0002791;9.42e-11;32!UBERON:0002780;1.89e-09;41!UBERON:0001890;1.89e-09;41!UBERON:0003528;3.41e-09;34!UBERON:0002020;3.41e-09;34!UBERON:0000473;4.24e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0001950;9.81e-20;20!UBERON:0002619;8.70e-18;22!UBERON:0001872;3.32e-16;5!UBERON:0000956;1.98e-15;25!UBERON:0000203;1.98e-15;25!UBERON:0002346;1.10e-14;4!UBERON:0000923;1.10e-14;4!UBERON:0010316;1.10e-14;4!UBERON:0005291;1.10e-14;4!UBERON:0000922;1.25e-13;49!UBERON:0001869;6.98e-13;32!UBERON:0001893;5.85e-12;34!UBERON:0002050;9.48e-12;5!UBERON:0005423;9.48e-12;5!UBERON:0002021;8.46e-11;5!UBERON:0002791;9.42e-11;32!UBERON:0002780;1.89e-09;41!UBERON:0001890;1.89e-09;41!UBERON:0003528;3.41e-09;34!UBERON:0002020;3.41e-09;34!UBERON:0000473;4.24e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.28e-19,20;UBERON:0002619,1.10e-17,22;UBERON:0001872,2.74e-16,5;UBERON:0000956,2.44e-15,25;UBERON:0000203,2.44e-15,25;UBERON:0001869,1.11e-13,32;UBERON:0001016,3.31e-13,89;UBERON:0001893,9.83e-13,34;UBERON:0002780,5.88e-12,41;UBERON:0001890,5.88e-12,41;UBERON:0003080,5.88e-12,41;UBERON:0006240,5.88e-12,41;UBERON:0002791,1.55e-11,32;UBERON:0001017,6.03e-11,81;UBERON:0002021,9.78e-11,5;UBERON:0003528,9.87e-11,34;UBERON:0002020,9.87e-11,34;UBERON:0000955,1.69e-09,68;UBERON:0006238,1.69e-09,68;UBERON:0002346,3.68e-09,86;UBERON:0004121,6.68e-09,171;UBERON:0000924,6.68e-09,171;UBERON:0006601,6.68e-09,171;UBERON:0000073,1.29e-08,53;UBERON:0002616,1.29e-08,53;UBERON:0003056,2.09e-08,61;UBERON:0001049,5.24e-08,56;UBERON:0005068,5.24e-08,56;UBERON:0006241,5.24e-08,56;UBERON:0007135,5.24e-08,56;UBERON:0000473,4.64e-07,8 | |||
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|short_description=p1@KCNN1 | |short_description=p1@KCNN1 | ||
}} | }} |
Revision as of 07:16, 18 November 2012
Short description: | p1@KCNN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KCNN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536713, uc010xqa.1_5end |
EntrezGene: | KCNN1 |
HGNC: | 6290 |
UniProt: | B4DP30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.87e-18 | 5 |
embryonic stem cell | 2.57e-17 | 5 |
conventional dendritic cell | 4.51e-10 | 8 |
CD1a-positive Langerhans cell | 2.10e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.10e-08 | 2 |
dendritic cell | 3.66e-08 | 10 |
germ line cell | 4.52e-08 | 7 |
germ cell | 4.52e-08 | 7 |
Merkel cell | 1.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neocortex | 1.28e-19 | 20 |
regional part of cerebral cortex | 1.10e-17 | 22 |
parietal lobe | 2.74e-16 | 5 |
cerebral cortex | 2.44e-15 | 25 |
pallium | 2.44e-15 | 25 |
cerebral hemisphere | 1.11e-13 | 32 |
nervous system | 3.31e-13 | 89 |
telencephalon | 9.83e-13 | 34 |
regional part of forebrain | 5.88e-12 | 41 |
forebrain | 5.88e-12 | 41 |
anterior neural tube | 5.88e-12 | 41 |
future forebrain | 5.88e-12 | 41 |
regional part of telencephalon | 1.55e-11 | 32 |
central nervous system | 6.03e-11 | 81 |
occipital lobe | 9.78e-11 | 5 |
brain grey matter | 9.87e-11 | 34 |
gray matter | 9.87e-11 | 34 |
brain | 1.69e-09 | 68 |
future brain | 1.69e-09 | 68 |
neurectoderm | 3.68e-09 | 86 |
ectoderm-derived structure | 6.68e-09 | 171 |
ectoderm | 6.68e-09 | 171 |
presumptive ectoderm | 6.68e-09 | 171 |
regional part of nervous system | 1.29e-08 | 53 |
regional part of brain | 1.29e-08 | 53 |
pre-chordal neural plate | 2.09e-08 | 61 |
neural tube | 5.24e-08 | 56 |
neural rod | 5.24e-08 | 56 |
future spinal cord | 5.24e-08 | 56 |
neural keel | 5.24e-08 | 56 |
testis | 4.64e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.57e-17 | 22 |
germ cell cancer | 7.57e-17 | 22 |
neuroectodermal tumor | 2.51e-16 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.