FFCP PHASE1:Hg19::chr11:102661460..102661475,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000359!3.17e-36!32;CL:0000192!1.41e-32!42;CL:0000514!1.41e-32!42;CL:0000187!8.07e-27!54;CL:0000680!6.49e-25!57;CL:0000056!6.49e-25!57;CL:0000355!6.49e-25!57;CL:0000183!9.39e-24!59;CL:0000393!3.34e-23!60;CL:0000211!3.34e-23!60;CL:0000055!1.67e-20!180;CL:0002539!1.59e-19!10;CL:0000222!1.50e-18!119;CL:0000220!4.60e-11!246;CL:0002321!7.33e-11!248;CL:0000723!6.40e-10!436;CL:0000048!8.19e-10!430;CL:0000034!2.15e-09!444;CL:0000057!3.13e-09!75;CL:1000306!4.81e-09!4;CL:0002547!4.81e-09!4;CL:0002371!5.08e-09!591;CL:0002594!9.58e-09!4;CL:0002595!6.56e-08!5;CL:0000548!7.22e-08!679;CL:0000004!7.22e-08!679;CL:0000255!7.22e-08!679;CL:0002592!7.34e-08!3;CL:0000144!9.01e-08!625;CL:0000012!1.00e-07!682;CL:0002494!1.33e-07!16;CL:0002582!8.93e-07!3 | |ontology_enrichment_celltype=CL:0000359!3.17e-36!32;CL:0000192!1.41e-32!42;CL:0000514!1.41e-32!42;CL:0000187!8.07e-27!54;CL:0000680!6.49e-25!57;CL:0000056!6.49e-25!57;CL:0000355!6.49e-25!57;CL:0000183!9.39e-24!59;CL:0000393!3.34e-23!60;CL:0000211!3.34e-23!60;CL:0000055!1.67e-20!180;CL:0002539!1.59e-19!10;CL:0000222!1.50e-18!119;CL:0000220!4.60e-11!246;CL:0002321!7.33e-11!248;CL:0000723!6.40e-10!436;CL:0000048!8.19e-10!430;CL:0000034!2.15e-09!444;CL:0000057!3.13e-09!75;CL:1000306!4.81e-09!4;CL:0002547!4.81e-09!4;CL:0002371!5.08e-09!591;CL:0002594!9.58e-09!4;CL:0002595!6.56e-08!5;CL:0000548!7.22e-08!679;CL:0000004!7.22e-08!679;CL:0000255!7.22e-08!679;CL:0002592!7.34e-08!3;CL:0000144!9.01e-08!625;CL:0000012!1.00e-07!682;CL:0002494!1.33e-07!16;CL:0002582!8.93e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.09e-43;32!CL:0000192;2.44e-24;43!CL:0002595;1.34e-22;5!CL:0002592;1.81e-21;3!CL:0002494;5.66e-20;16!CL:0000569;9.21e-16;4!CL:0002593;8.77e-15;2!CL:0000187;2.16e-13;55!CL:0002539;5.68e-11;10!CL:0000393;9.69e-11;61!CL:0000211;9.69e-11;61!CL:0002591;7.09e-08;1!CL:0002379;7.09e-08;1!CL:1000306;1.28e-07;4!CL:0002547;1.28e-07;4 | |ontology_enrichment_celltype_v019=CL:0000359;6.09e-43;32!CL:0000192;2.44e-24;43!CL:0002595;1.34e-22;5!CL:0002592;1.81e-21;3!CL:0002494;5.66e-20;16!CL:0000569;9.21e-16;4!CL:0002593;8.77e-15;2!CL:0000187;2.16e-13;55!CL:0002539;5.68e-11;10!CL:0000393;9.69e-11;61!CL:0000211;9.69e-11;61!CL:0002591;7.09e-08;1!CL:0002379;7.09e-08;1!CL:1000306;1.28e-07;4!CL:0002547;1.28e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.26e-45,32;CL:0000192,1.47e-32,43;CL:0000514,1.47e-32,43;CL:0000187,8.27e-25,55;CL:0000680,2.26e-23,58;CL:0000056,2.26e-23,58;CL:0000355,2.26e-23,58;CL:0002595,1.42e-22,5;CL:0000393,4.47e-22,61;CL:0000211,4.47e-22,61;CL:0002592,1.59e-21,3;CL:0002494,5.52e-20,16;CL:0000569,1.45e-15,4;CL:0000011,1.45e-15,4;CL:0002593,9.10e-15,2;CL:0000222,9.13e-13,121;CL:0002539,4.61e-11,10;CL:0002321,1.21e-08,250;CL:0002379,6.63e-08,1;CL:0002591,1.21e-07,1;CL:1000306,1.22e-07,4;CL:0002547,1.22e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;2.44e-24;43!CL:0000011;9.21e-16;4!CL:0000355;2.80e-12;58 | |ontology_enrichment_development_v019=CL:0000514;2.44e-24;43!CL:0000011;9.21e-16;4!CL:0000355;2.80e-12;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060085;7.09e-08;1!DOID:3165;7.09e-08;1!DOID:0060121;7.09e-08;1!DOID:3620;7.09e-08;1!DOID:2438;7.09e-08;1!DOID:4418;7.09e-08;1!DOID:3565;7.09e-08;1!DOID:3112;7.09e-08;1 | |ontology_enrichment_disease_v019=DOID:0060085;7.09e-08;1!DOID:3165;7.09e-08;1!DOID:0060121;7.09e-08;1!DOID:3620;7.09e-08;1!DOID:2438;7.09e-08;1!DOID:4418;7.09e-08;1!DOID:3565;7.09e-08;1!DOID:3112;7.09e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,4.40e-08,1;DOID:3620,6.63e-08,1;DOID:3565,6.63e-08,1;DOID:0060085,9.94e-08,1;DOID:3165,9.94e-08,1;DOID:0060121,9.94e-08,1;DOID:2438,9.94e-08,1;DOID:4418,9.94e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.73e-47!42;UBERON:0003509!1.73e-47!42;UBERON:0004572!1.73e-47!42;UBERON:0004573!1.53e-44!33;UBERON:0004571!1.53e-44!33;UBERON:0000055!4.72e-38!69;UBERON:0001981!3.94e-36!60;UBERON:0007500!3.94e-36!60;UBERON:0004537!3.94e-36!60;UBERON:0006965!3.94e-36!60;UBERON:0002049!1.23e-31!79;UBERON:0007798!1.23e-31!79;UBERON:0004872!3.65e-31!84;UBERON:0000947!3.32e-28!21;UBERON:0010191!3.32e-28!21;UBERON:0004535!2.78e-26!110;UBERON:0001009!3.18e-25!113;UBERON:0004290!6.52e-25!70;UBERON:0001134!1.14e-22!61;UBERON:0002036!1.14e-22!61;UBERON:0003082!1.14e-22!61;UBERON:0000486!1.22e-22!82;UBERON:0000914!4.61e-22!83;UBERON:0002329!4.61e-22!83;UBERON:0003077!4.61e-22!83;UBERON:0003059!4.61e-22!83;UBERON:0007282!4.61e-22!83;UBERON:0009618!4.61e-22!83;UBERON:0007285!4.61e-22!83;UBERON:0002385!1.17e-21!63;UBERON:0001015!1.17e-21!63;UBERON:0000383!1.17e-21!63;UBERON:0003914!6.08e-21!118;UBERON:0004237!1.59e-19!10;UBERON:0004695!1.59e-19!10;UBERON:0002111!1.59e-19!10;UBERON:0004178!1.59e-19!10;UBERON:0001135!1.35e-14!15;UBERON:0000490!9.28e-13!138;UBERON:0005256!7.81e-11!143;UBERON:0004111!1.39e-09!241;UBERON:0000415!4.81e-09!4;UBERON:0007240!4.81e-09!4;UBERON:0005742!4.81e-09!4;UBERON:0005734!4.81e-09!4;UBERON:0004664!4.81e-09!4;UBERON:0004663!4.81e-09!4;UBERON:0001310!9.58e-09!4;UBERON:0003081!2.78e-08!216;UBERON:0000477!4.37e-08!286;UBERON:0000025!4.42e-08!194;UBERON:0003834!6.56e-08!5;UBERON:0001533!6.56e-08!5;UBERON:0001621!7.34e-08!3;UBERON:0003498!9.99e-08!5;UBERON:0005985!9.99e-08!5;UBERON:0000483!5.77e-07!309;UBERON:0003513!6.17e-07!8;UBERON:0000119!8.97e-07!312 | |ontology_enrichment_uberon=UBERON:0001637!1.73e-47!42;UBERON:0003509!1.73e-47!42;UBERON:0004572!1.73e-47!42;UBERON:0004573!1.53e-44!33;UBERON:0004571!1.53e-44!33;UBERON:0000055!4.72e-38!69;UBERON:0001981!3.94e-36!60;UBERON:0007500!3.94e-36!60;UBERON:0004537!3.94e-36!60;UBERON:0006965!3.94e-36!60;UBERON:0002049!1.23e-31!79;UBERON:0007798!1.23e-31!79;UBERON:0004872!3.65e-31!84;UBERON:0000947!3.32e-28!21;UBERON:0010191!3.32e-28!21;UBERON:0004535!2.78e-26!110;UBERON:0001009!3.18e-25!113;UBERON:0004290!6.52e-25!70;UBERON:0001134!1.14e-22!61;UBERON:0002036!1.14e-22!61;UBERON:0003082!1.14e-22!61;UBERON:0000486!1.22e-22!82;UBERON:0000914!4.61e-22!83;UBERON:0002329!4.61e-22!83;UBERON:0003077!4.61e-22!83;UBERON:0003059!4.61e-22!83;UBERON:0007282!4.61e-22!83;UBERON:0009618!4.61e-22!83;UBERON:0007285!4.61e-22!83;UBERON:0002385!1.17e-21!63;UBERON:0001015!1.17e-21!63;UBERON:0000383!1.17e-21!63;UBERON:0003914!6.08e-21!118;UBERON:0004237!1.59e-19!10;UBERON:0004695!1.59e-19!10;UBERON:0002111!1.59e-19!10;UBERON:0004178!1.59e-19!10;UBERON:0001135!1.35e-14!15;UBERON:0000490!9.28e-13!138;UBERON:0005256!7.81e-11!143;UBERON:0004111!1.39e-09!241;UBERON:0000415!4.81e-09!4;UBERON:0007240!4.81e-09!4;UBERON:0005742!4.81e-09!4;UBERON:0005734!4.81e-09!4;UBERON:0004664!4.81e-09!4;UBERON:0004663!4.81e-09!4;UBERON:0001310!9.58e-09!4;UBERON:0003081!2.78e-08!216;UBERON:0000477!4.37e-08!286;UBERON:0000025!4.42e-08!194;UBERON:0003834!6.56e-08!5;UBERON:0001533!6.56e-08!5;UBERON:0001621!7.34e-08!3;UBERON:0003498!9.99e-08!5;UBERON:0005985!9.99e-08!5;UBERON:0000483!5.77e-07!309;UBERON:0003513!6.17e-07!8;UBERON:0000119!8.97e-07!312 | ||
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|short_description=p@chr11:102661460..102661475,- | |short_description=p@chr11:102661460..102661475,- | ||
}} | }} |
Revision as of 10:19, 18 November 2012
Short description: | p@chr11:102661460..102661475, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:102661460..102661475, - |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.26e-45 | 32 |
smooth muscle cell | 1.47e-32 | 43 |
smooth muscle myoblast | 1.47e-32 | 43 |
muscle cell | 8.27e-25 | 55 |
muscle precursor cell | 2.26e-23 | 58 |
myoblast | 2.26e-23 | 58 |
multi-potent skeletal muscle stem cell | 2.26e-23 | 58 |
smooth muscle cell of the subclavian artery | 1.42e-22 | 5 |
electrically responsive cell | 4.47e-22 | 61 |
electrically active cell | 4.47e-22 | 61 |
smooth muscle cell of the coronary artery | 1.59e-21 | 3 |
cardiocyte | 5.52e-20 | 16 |
cardiac mesenchymal cell | 1.45e-15 | 4 |
migratory trunk neural crest cell | 1.45e-15 | 4 |
smooth muscle cell of the internal thoracic artery | 9.10e-15 | 2 |
mesodermal cell | 9.13e-13 | 121 |
aortic smooth muscle cell | 4.61e-11 | 10 |
embryonic cell | 1.21e-08 | 250 |
meningothelial cell | 6.63e-08 | 1 |
smooth muscle cell of the pulmonary artery | 1.21e-07 | 1 |
fibroblast of tunica adventitia of artery | 1.22e-07 | 4 |
fibroblast of the aortic adventitia | 1.22e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 4.40e-08 | 1 |
central nervous system cancer | 6.63e-08 | 1 |
meningioma | 6.63e-08 | 1 |
organ system benign neoplasm | 9.94e-08 | 1 |
skin benign neoplasm | 9.94e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.