FFCP PHASE1:Hg19::chr9:12693336..12693460,+: Difference between revisions
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|ontology_enrichment_development_v019=UBERON:0006241;6.47e-07;3!UBERON:0003057;6.47e-07;3 | |ontology_enrichment_development_v019=UBERON:0006241;6.47e-07;3!UBERON:0003057;6.47e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;1.53e-10;2 | |ontology_enrichment_disease_v019=DOID:1909;1.53e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.64e-10,2 | |||
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| ||
|short_description=p1@TYRP1 | |short_description=p1@TYRP1 | ||
}} | }} |
Revision as of 21:31, 20 November 2012
Short description: | p1@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000381137, ENST00000388918, NM_000550, uc003zkv.3_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | Q5W0M5P17643 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.40e-48 | 14 |
melanocyte | 5.88e-39 | 10 |
melanoblast | 5.88e-39 | 10 |
visual pigment cell | 4.29e-20 | 4 |
neurecto-epithelial cell | 1.19e-18 | 20 |
light melanocyte | 7.94e-16 | 3 |
Langerhans cell | 2.23e-15 | 5 |
retinal pigment epithelial cell | 2.55e-15 | 3 |
ecto-epithelial cell | 3.32e-15 | 34 |
columnar/cuboidal epithelial cell | 2.20e-13 | 27 |
conventional dendritic cell | 1.38e-08 | 8 |
migratory neural crest cell | 8.48e-08 | 41 |
dendritic cell | 4.93e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 2.55e-15 | 3 |
presumptive retinal pigmented epithelium | 2.55e-15 | 3 |
medulla oblongata | 9.23e-15 | 3 |
myelencephalon | 9.23e-15 | 3 |
future myelencephalon | 9.23e-15 | 3 |
retina | 2.29e-13 | 6 |
photoreceptor array | 2.29e-13 | 6 |
posterior segment of eyeball | 2.29e-13 | 6 |
layer of retina | 1.30e-11 | 4 |
ecto-epithelium | 2.64e-10 | 104 |
sense organ | 7.37e-09 | 24 |
sensory system | 7.37e-09 | 24 |
entire sense organ system | 7.37e-09 | 24 |
neural plate | 5.59e-08 | 82 |
presumptive neural plate | 5.59e-08 | 82 |
eye | 1.02e-07 | 21 |
visual system | 1.02e-07 | 21 |
brainstem | 1.31e-07 | 6 |
posterior neural tube | 1.60e-07 | 15 |
chordal neural plate | 1.60e-07 | 15 |
neurectoderm | 1.75e-07 | 86 |
spinal cord | 5.90e-07 | 3 |
dorsal region element | 5.90e-07 | 3 |
dorsum | 5.90e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.64e-10 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.