FFCP PHASE1:Hg19::chr11:61793509..61793547,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2|description=CAGE_peak_at_chr11:61793509..61793547,+|id=chr11:61793509..61793547,+|ontology_enrichment_celltype=CL:0000738!3.42e-57!140;CL:0002057!5.30e-57!42;CL:0000860!3.40e-52!45;CL:0000766!5.36e-49!76;CL:0000037!2.49e-44!172;CL:0000566!2.49e-44!172;CL:0002031!1.16e-42!124;CL:0002087!1.37e-42!119;CL:0000988!1.83e-40!182;CL:0000557!3.92e-39!71;CL:0002032!1.21e-38!165;CL:0000837!1.21e-38!165;CL:0002009!6.84e-38!65;CL:0000839!3.18e-36!70;CL:0002194!1.03e-35!63;CL:0000576!1.03e-35!63;CL:0000040!1.03e-35!63;CL:0000559!1.03e-35!63;CL:0000763!2.35e-31!112;CL:0000049!2.35e-31!112;CL:0002393!1.91e-14!9;CL:0002397!1.91e-14!9;CL:0000791!3.99e-14!18;CL:0000789!3.99e-14!18;CL:0002420!3.99e-14!18;CL:0002419!3.99e-14!18;CL:0000790!3.99e-14!18;CL:0000094!4.64e-14!8;CL:0000134!1.12e-11!358;CL:0002320!5.16e-11!365;CL:0000624!1.52e-10!6;CL:0000081!1.20e-09!11;CL:0000084!4.56e-09!25;CL:0000827!4.56e-09!25;CL:0000219!1.01e-08!390;CL:0000838!1.58e-07!52;CL:0000542!2.78e-07!53;CL:0000051!2.78e-07!53;CL:0000625!3.08e-07!11|ontology_enrichment_celltype_v019=CL:0000860;3.39e-47;33!CL:0002057;3.39e-47;33!CL:0000576;5.27e-37;48!CL:0000473;2.04e-32;39!CL:0000234;2.04e-32;39!CL:0000766;9.22e-32;69!CL:0002087;2.11e-20;104!CL:0000094;2.22e-19;8!CL:0000791;3.27e-15;18!CL:0000789;3.27e-15;18!CL:0002419;3.27e-15;18!CL:0002393;1.40e-14;6!CL:0002397;1.40e-14;6!CL:0000738;1.85e-14;136!CL:0000624;2.22e-14;6!CL:0000081;1.31e-13;11!CL:0000763;2.32e-12;100!CL:0000084;3.82e-10;25!CL:0000988;5.13e-10;177!CL:0000775;1.23e-08;3!CL:0000898;2.03e-08;3!CL:0000226;3.42e-08;3!CL:0000842;3.42e-08;3!CL:0000767;9.36e-08;3!CL:0000219;1.49e-07;193!CL:0000623;3.22e-07;3!CL:0000875;4.96e-07;3!CL:0002396;4.96e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,6.86e-75,136;CL:0000860,3.50e-70,42;CL:0002057,3.50e-70,42;CL:0000766,1.16e-64,72;CL:0000473,6.48e-60,48;CL:0000234,6.48e-60,48;CL:0000037,8.03e-59,168;CL:0002031,3.92e-56,120;CL:0002087,1.20e-55,115;CL:0000988,7.24e-55,177;CL:0002032,2.25e-52,161;CL:0000837,2.25e-52,161;CL:0000557,7.33e-51,67;CL:0002009,1.24e-48,61;CL:0000839,6.63e-47,66;CL:0002194,1.45e-45,59;CL:0000576,1.45e-45,59;CL:0000040,1.45e-45,59;CL:0000559,1.45e-45,59;CL:0000763,5.08e-42,108;CL:0000049,5.08e-42,108;CL:0002393,6.03e-20,9;CL:0002397,6.03e-20,9;CL:0000094,2.15e-19,8;CL:0000134,5.97e-18,354;CL:0002320,3.07e-17,361;CL:0000791,3.63e-15,18;CL:0000789,3.63e-15,18;CL:0002420,3.63e-15,18;CL:0002419,3.63e-15,18;CL:0000790,3.63e-15,18;CL:0000219,9.59e-15,386;CL:0000624,2.25e-14,6;CL:0000081,1.28e-13,11;CL:0000034,5.88e-12,441;CL:0000048,1.02e-11,427;CL:0000723,2.64e-11,433;CL:0000084,4.10e-10,25;CL:0000827,4.10e-10,25;CL:0000838,4.87e-10,52;CL:0000542,9.23e-10,53;CL:0000051,9.23e-10,53;CL:0000775,1.23e-08,3;CL:0000898,2.03e-08,3;CL:0000226,3.42e-08,3;CL:0000842,3.42e-08,3;CL:0000767,9.04e-08,3;CL:0000623,3.36e-07,3;CL:0000825,3.36e-07,3;CL:0000875,4.27e-07,3;CL:0002396,4.27e-07,3|ontology_enrichment_development_v019=CL:0002057;1.48e-48;42!CL:0000790;3.27e-15;18!CL:0000049;7.65e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.57e-43!102;UBERON:0003061!2.57e-43!102;UBERON:0002193!4.47e-39!112;UBERON:0002371!1.45e-34!80;UBERON:0001474!4.86e-31!86;UBERON:0004765!4.20e-24!101;UBERON:0001434!4.20e-24!101;UBERON:0002405!1.51e-22!115;UBERON:0003081!2.79e-14!216;UBERON:0002384!1.40e-10!375;UBERON:0000178!1.75e-10!15;UBERON:0000179!1.75e-10!15;UBERON:0000463!1.75e-10!15;UBERON:0002204!1.58e-09!167|ontology_enrichment_uberon_v019=UBERON:0000178;2.79e-10;15!UBERON:0000179;2.79e-10;15!UBERON:0000463;2.79e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.94e-53,98;UBERON:0003061,4.94e-53,98;UBERON:0002193,9.78e-47,108;UBERON:0002371,1.52e-45,76;UBERON:0001474,2.66e-41,82;UBERON:0002405,4.81e-37,93;UBERON:0004765,1.61e-36,90;UBERON:0001434,1.27e-31,100;UBERON:0003081,5.57e-18,203;UBERON:0002384,2.85e-16,371;UBERON:0002204,4.07e-14,167;UBERON:0000178,2.74e-10,15;UBERON:0000179,2.74e-10,15;UBERON:0000463,2.74e-10,15;UBERON:0000926,6.83e-07,315;UBERON:0004120,6.83e-07,315;UBERON:0006603,6.83e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.2084923340853,9.21190555433311,5.72819656269481,0,0,0,0,0,1.46800219667424,14.9578760303607,21.4582558793052,21.918097942301,0,0,0,1.01778767145695,2.26725566213286,1.4555043671269,4.41615170120801,1.23350366406548,4.02618282163635,4.89077066947656,1.7931249457037,9.69577142543199,15.5135556331478,7.74581620300591,16.251178391321,5.27078550719293,1.36453075028923,8.31476892446813,12.549439587207,9.9487998393589,23.0161365287655,0.659702600373432,0.398927315243264,2.55734850319616,5.5139755339431,2.26954089876456,8.09668923694247,3.01498398308092,3.65038042894141,9.5563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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr11:61793509..61793547,+ | |||
|id=chr11:61793509..61793547,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.42e-57!140;CL:0002057!5.30e-57!42;CL:0000860!3.40e-52!45;CL:0000766!5.36e-49!76;CL:0000037!2.49e-44!172;CL:0000566!2.49e-44!172;CL:0002031!1.16e-42!124;CL:0002087!1.37e-42!119;CL:0000988!1.83e-40!182;CL:0000557!3.92e-39!71;CL:0002032!1.21e-38!165;CL:0000837!1.21e-38!165;CL:0002009!6.84e-38!65;CL:0000839!3.18e-36!70;CL:0002194!1.03e-35!63;CL:0000576!1.03e-35!63;CL:0000040!1.03e-35!63;CL:0000559!1.03e-35!63;CL:0000763!2.35e-31!112;CL:0000049!2.35e-31!112;CL:0002393!1.91e-14!9;CL:0002397!1.91e-14!9;CL:0000791!3.99e-14!18;CL:0000789!3.99e-14!18;CL:0002420!3.99e-14!18;CL:0002419!3.99e-14!18;CL:0000790!3.99e-14!18;CL:0000094!4.64e-14!8;CL:0000134!1.12e-11!358;CL:0002320!5.16e-11!365;CL:0000624!1.52e-10!6;CL:0000081!1.20e-09!11;CL:0000084!4.56e-09!25;CL:0000827!4.56e-09!25;CL:0000219!1.01e-08!390;CL:0000838!1.58e-07!52;CL:0000542!2.78e-07!53;CL:0000051!2.78e-07!53;CL:0000625!3.08e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.39e-47;33!CL:0002057;3.39e-47;33!CL:0000576;5.27e-37;48!CL:0000473;2.04e-32;39!CL:0000234;2.04e-32;39!CL:0000766;9.22e-32;69!CL:0002087;2.11e-20;104!CL:0000094;2.22e-19;8!CL:0000791;3.27e-15;18!CL:0000789;3.27e-15;18!CL:0002419;3.27e-15;18!CL:0002393;1.40e-14;6!CL:0002397;1.40e-14;6!CL:0000738;1.85e-14;136!CL:0000624;2.22e-14;6!CL:0000081;1.31e-13;11!CL:0000763;2.32e-12;100!CL:0000084;3.82e-10;25!CL:0000988;5.13e-10;177!CL:0000775;1.23e-08;3!CL:0000898;2.03e-08;3!CL:0000226;3.42e-08;3!CL:0000842;3.42e-08;3!CL:0000767;9.36e-08;3!CL:0000219;1.49e-07;193!CL:0000623;3.22e-07;3!CL:0000875;4.96e-07;3!CL:0002396;4.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.86e-75,136;CL:0000860,3.50e-70,42;CL:0002057,3.50e-70,42;CL:0000766,1.16e-64,72;CL:0000473,6.48e-60,48;CL:0000234,6.48e-60,48;CL:0000037,8.03e-59,168;CL:0002031,3.92e-56,120;CL:0002087,1.20e-55,115;CL:0000988,7.24e-55,177;CL:0002032,2.25e-52,161;CL:0000837,2.25e-52,161;CL:0000557,7.33e-51,67;CL:0002009,1.24e-48,61;CL:0000839,6.63e-47,66;CL:0002194,1.45e-45,59;CL:0000576,1.45e-45,59;CL:0000040,1.45e-45,59;CL:0000559,1.45e-45,59;CL:0000763,5.08e-42,108;CL:0000049,5.08e-42,108;CL:0002393,6.03e-20,9;CL:0002397,6.03e-20,9;CL:0000094,2.15e-19,8;CL:0000134,5.97e-18,354;CL:0002320,3.07e-17,361;CL:0000791,3.63e-15,18;CL:0000789,3.63e-15,18;CL:0002420,3.63e-15,18;CL:0002419,3.63e-15,18;CL:0000790,3.63e-15,18;CL:0000219,9.59e-15,386;CL:0000624,2.25e-14,6;CL:0000081,1.28e-13,11;CL:0000034,5.88e-12,441;CL:0000048,1.02e-11,427;CL:0000723,2.64e-11,433;CL:0000084,4.10e-10,25;CL:0000827,4.10e-10,25;CL:0000838,4.87e-10,52;CL:0000542,9.23e-10,53;CL:0000051,9.23e-10,53;CL:0000775,1.23e-08,3;CL:0000898,2.03e-08,3;CL:0000226,3.42e-08,3;CL:0000842,3.42e-08,3;CL:0000767,9.04e-08,3;CL:0000623,3.36e-07,3;CL:0000825,3.36e-07,3;CL:0000875,4.27e-07,3;CL:0002396,4.27e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-48;42!CL:0000790;3.27e-15;18!CL:0000049;7.65e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.57e-43!102;UBERON:0003061!2.57e-43!102;UBERON:0002193!4.47e-39!112;UBERON:0002371!1.45e-34!80;UBERON:0001474!4.86e-31!86;UBERON:0004765!4.20e-24!101;UBERON:0001434!4.20e-24!101;UBERON:0002405!1.51e-22!115;UBERON:0003081!2.79e-14!216;UBERON:0002384!1.40e-10!375;UBERON:0000178!1.75e-10!15;UBERON:0000179!1.75e-10!15;UBERON:0000463!1.75e-10!15;UBERON:0002204!1.58e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.79e-10;15!UBERON:0000179;2.79e-10;15!UBERON:0000463;2.79e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.94e-53,98;UBERON:0003061,4.94e-53,98;UBERON:0002193,9.78e-47,108;UBERON:0002371,1.52e-45,76;UBERON:0001474,2.66e-41,82;UBERON:0002405,4.81e-37,93;UBERON:0004765,1.61e-36,90;UBERON:0001434,1.27e-31,100;UBERON:0003081,5.57e-18,203;UBERON:0002384,2.85e-16,371;UBERON:0002204,4.07e-14,167;UBERON:0000178,2.74e-10,15;UBERON:0000179,2.74e-10,15;UBERON:0000463,2.74e-10,15;UBERON:0000926,6.83e-07,315;UBERON:0004120,6.83e-07,315;UBERON:0006603,6.83e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.2084923340853,9.21190555433311,5.72819656269481,0,0,0,0,0,1.46800219667424,14.9578760303607,21.4582558793052,21.918097942301,0,0,0,1.01778767145695,2.26725566213286,1.4555043671269,4.41615170120801,1.23350366406548,4.02618282163635,4.89077066947656,1.7931249457037,9.69577142543199,15.5135556331478,7.74581620300591,16.251178391321,5.27078550719293,1.36453075028923,8.31476892446813,12.549439587207,9.9487998393589,23.0161365287655,0.659702600373432,0.398927315243264,2.55734850319616,5.5139755339431,2.26954089876456,8.09668923694247,3.01498398308092,3.65038042894141,9.55630916702513,0.605399502633369,3.68277635987565,6.32924774881769,12.4640618924046,15.3075095974831,10.063614984402,24.03832706535,11.563620748796,12.8580469357664,7.69534408101371,4.97291692997725,3.83594722905731,0,0,0,1.28019066769952,0,0,0,0,3.98449078376614,1.17447437874188,4.96955196562797,2.64342657158052,2.24203425192614,0.263384084775077,8.65522988500866,9.03924754323079,10.074473450976,0,21.1849473311834,17.5175688121851,17.534405556712,0.557052284425868,20.6224135232386,11.5197625183483,12.9985854607207,0.25618263945135,0.260118695119756,0,0,0,20.6118322795264,9.63146981122967,6.27213142829861,0.226618685395132,24.526111590523,17.1813722741315,11.3858861408776,0.318565414324097,0.651083453856419,0,1.05402583354441,0,3.74792179657038,1.18388626022008,0,5.24177532384304,3.7441627409691,4.63438092424957,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0.953962497221368,0.571994910780128,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,134.416025784785,162.867710942297,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,8.08579650609011,5.33243827642757,4.4184851699233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68419964787516,4.31255149719035,6.41715181398742,0,0,0,0,0,56.1755267960387,35.899375104483,128.883224678607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6128495934961,39.2599845489883,12.5938518208064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,0,1.70894156152249,0.952927101831156,3.70226045777575,7.13320642311989,5.40031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.799791132412,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0.128915775947154,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr11:61793509..61793547,+ | |||
}} |
Revision as of 18:29, 10 September 2013
Short description: | p@chr11:61793509..61793547, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:61793509..61793547, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.94e-53 | 98 |
blood island | 4.94e-53 | 98 |
hemolymphoid system | 9.78e-47 | 108 |
bone marrow | 1.52e-45 | 76 |
bone element | 2.66e-41 | 82 |
immune system | 4.81e-37 | 93 |
skeletal element | 1.61e-36 | 90 |
skeletal system | 1.27e-31 | 100 |
lateral plate mesoderm | 5.57e-18 | 203 |
connective tissue | 2.85e-16 | 371 |
musculoskeletal system | 4.07e-14 | 167 |
blood | 2.74e-10 | 15 |
haemolymphatic fluid | 2.74e-10 | 15 |
organism substance | 2.74e-10 | 15 |
mesoderm | 6.83e-07 | 315 |
mesoderm-derived structure | 6.83e-07 | 315 |
presumptive mesoderm | 6.83e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.