FFCP PHASE1:Hg19::chr12:124942192..124942204,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:124942192..124942204,-|id=chr12:124942192..124942204,-|ontology_enrichment_celltype=CL:0000988!7.55e-16!182;CL:0000738!1.09e-15!140;CL:0000037!2.51e-15!172;CL:0000566!2.51e-15!172;CL:0002087!5.10e-15!119;CL:0002032!1.08e-14!165;CL:0000837!1.08e-14!165;CL:0002031!3.47e-14!124;CL:0000542!7.95e-14!53;CL:0000051!7.95e-14!53;CL:0000838!3.57e-13!52;CL:0000791!8.87e-13!18;CL:0000789!8.87e-13!18;CL:0002420!8.87e-13!18;CL:0002419!8.87e-13!18;CL:0000790!8.87e-13!18;CL:0000084!1.41e-11!25;CL:0000827!1.41e-11!25;CL:0000625!4.05e-10!11|ontology_enrichment_celltype_v019=CL:0000791;3.01e-12;18!CL:0000789;3.01e-12;18!CL:0002419;3.01e-12;18!CL:0000625;8.55e-11;11!CL:0000097;2.91e-09;5!CL:0000084;1.47e-08;25!CL:0000542;6.30e-07;53|ontology_enrichment_celltype_v019_2=CL:0000791,4.63e-12,18;CL:0000789,4.63e-12,18;CL:0002420,4.63e-12,18;CL:0002419,4.63e-12,18;CL:0000790,4.63e-12,18;CL:0000838,6.04e-11,52;CL:0000542,1.08e-10,53;CL:0000051,1.08e-10,53;CL:0000625,1.60e-10,11;CL:0000097,1.12e-09,5;CL:0002028,1.12e-09,5;CL:0000084,1.98e-08,25;CL:0000827,1.98e-08,25;CL:0002031,9.03e-07,120|ontology_enrichment_development_v019=CL:0000790;3.01e-12;18!CL:0000051;6.30e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.58e-24!115;UBERON:0003080!7.86e-14!42;UBERON:0002780!6.22e-13!41;UBERON:0001890!6.22e-13!41;UBERON:0006240!6.22e-13!41;UBERON:0001049!7.89e-13!57;UBERON:0005068!7.89e-13!57;UBERON:0006241!7.89e-13!57;UBERON:0007135!7.89e-13!57;UBERON:0001893!1.22e-11!34;UBERON:0001869!1.35e-11!32;UBERON:0002619!2.46e-11!22;UBERON:0001950!3.82e-11!20;UBERON:0002791!7.02e-11!33;UBERON:0002020!1.87e-10!34;UBERON:0003528!1.87e-10!34;UBERON:0002616!2.52e-10!59;UBERON:0000956!2.09e-09!25;UBERON:0000203!2.09e-09!25;UBERON:0000955!3.27e-09!69;UBERON:0006238!3.27e-09!69;UBERON:0001017!9.07e-09!82;UBERON:0002390!1.49e-08!102;UBERON:0003061!1.49e-08!102;UBERON:0005743!1.63e-08!86;UBERON:0000200!2.30e-08!6;UBERON:0002193!6.48e-08!112;UBERON:0003056!1.07e-07!61;UBERON:0004177!1.97e-07!7;UBERON:0003075!3.81e-07!86;UBERON:0007284!3.81e-07!86;UBERON:0000073!8.69e-07!94;UBERON:0001016!8.69e-07!94|ontology_enrichment_uberon_v019=UBERON:0002619;1.48e-23;22!UBERON:0001950;1.79e-21;20!UBERON:0000956;1.40e-20;25!UBERON:0000203;1.40e-20;25!UBERON:0000200;2.19e-13;6!UBERON:0001869;4.50e-13;32!UBERON:0001893;8.45e-13;34!UBERON:0003528;9.63e-13;34!UBERON:0002020;9.63e-13;34!UBERON:0002791;1.60e-12;32!UBERON:0002771;1.18e-10;2!UBERON:0002780;1.96e-09;41!UBERON:0001890;1.96e-09;41!UBERON:0001870;1.14e-07;3!UBERON:0001871;9.82e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.97e-23,22;UBERON:0001950,2.52e-21,20;UBERON:0000956,2.57e-20,25;UBERON:0000203,2.57e-20,25;UBERON:0002791,1.53e-15,32;UBERON:0001869,1.53e-15,32;UBERON:0003528,1.57e-14,34;UBERON:0002020,1.57e-14,34;UBERON:0001893,1.57e-14,34;UBERON:0002780,3.91e-14,41;UBERON:0001890,3.91e-14,41;UBERON:0003080,3.91e-14,41;UBERON:0006240,3.91e-14,41;UBERON:0000200,1.73e-13,6;UBERON:0007023,2.46e-12,114;UBERON:0002771,1.09e-10,2;UBERON:0000073,1.89e-10,53;UBERON:0002616,1.89e-10,53;UBERON:0001049,8.95e-10,56;UBERON:0005068,8.95e-10,56;UBERON:0006241,8.95e-10,56;UBERON:0007135,8.95e-10,56;UBERON:0003056,8.55e-09,61;UBERON:0000955,1.60e-07,68;UBERON:0006238,1.60e-07,68;UBERON:0001870,1.99e-07,3;UBERON:0001871,7.86e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.656804715599566,0.708397031823113,1.18009283054671,0.767658796194425,0.309632246632152,0,0,0,0,0,0,0,0.601633342410425,0.651032612147555,0,0.32389366601898,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0.575384784644301,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0.852449501065388,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0.434377689410233,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,0.426730222566507,0,1.14950487990897,0,0,1.70763890732835,0,0,0,0,0,0.393419540227666,1.17903228824749,0.822405995998037,0.334372990781356,0,0.473447805734733,0,1.11410456885174,0,0.221533894583621,0.270803863765016,0.768547918354051,0.390178042679635,0.657751618414705,1.10540007114339,0.579606171470105,0.296573126324121,0.267540828089713,0,0.793165398882963,0.766440987203842,0.34362744548263,0.253019692019503,0.637130828648193,1.30216690771284,0,0.752875595388864,0.255973222308837,1.24930726552346,0.710331756132051,0.821127996921047,1.20964045934839,1.06976078313403,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:124942192..124942204,- | |||
|id=chr12:124942192..124942204,- | |||
|ontology_enrichment_celltype=CL:0000988!7.55e-16!182;CL:0000738!1.09e-15!140;CL:0000037!2.51e-15!172;CL:0000566!2.51e-15!172;CL:0002087!5.10e-15!119;CL:0002032!1.08e-14!165;CL:0000837!1.08e-14!165;CL:0002031!3.47e-14!124;CL:0000542!7.95e-14!53;CL:0000051!7.95e-14!53;CL:0000838!3.57e-13!52;CL:0000791!8.87e-13!18;CL:0000789!8.87e-13!18;CL:0002420!8.87e-13!18;CL:0002419!8.87e-13!18;CL:0000790!8.87e-13!18;CL:0000084!1.41e-11!25;CL:0000827!1.41e-11!25;CL:0000625!4.05e-10!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.01e-12;18!CL:0000789;3.01e-12;18!CL:0002419;3.01e-12;18!CL:0000625;8.55e-11;11!CL:0000097;2.91e-09;5!CL:0000084;1.47e-08;25!CL:0000542;6.30e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.63e-12,18;CL:0000789,4.63e-12,18;CL:0002420,4.63e-12,18;CL:0002419,4.63e-12,18;CL:0000790,4.63e-12,18;CL:0000838,6.04e-11,52;CL:0000542,1.08e-10,53;CL:0000051,1.08e-10,53;CL:0000625,1.60e-10,11;CL:0000097,1.12e-09,5;CL:0002028,1.12e-09,5;CL:0000084,1.98e-08,25;CL:0000827,1.98e-08,25;CL:0002031,9.03e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.01e-12;18!CL:0000051;6.30e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.58e-24!115;UBERON:0003080!7.86e-14!42;UBERON:0002780!6.22e-13!41;UBERON:0001890!6.22e-13!41;UBERON:0006240!6.22e-13!41;UBERON:0001049!7.89e-13!57;UBERON:0005068!7.89e-13!57;UBERON:0006241!7.89e-13!57;UBERON:0007135!7.89e-13!57;UBERON:0001893!1.22e-11!34;UBERON:0001869!1.35e-11!32;UBERON:0002619!2.46e-11!22;UBERON:0001950!3.82e-11!20;UBERON:0002791!7.02e-11!33;UBERON:0002020!1.87e-10!34;UBERON:0003528!1.87e-10!34;UBERON:0002616!2.52e-10!59;UBERON:0000956!2.09e-09!25;UBERON:0000203!2.09e-09!25;UBERON:0000955!3.27e-09!69;UBERON:0006238!3.27e-09!69;UBERON:0001017!9.07e-09!82;UBERON:0002390!1.49e-08!102;UBERON:0003061!1.49e-08!102;UBERON:0005743!1.63e-08!86;UBERON:0000200!2.30e-08!6;UBERON:0002193!6.48e-08!112;UBERON:0003056!1.07e-07!61;UBERON:0004177!1.97e-07!7;UBERON:0003075!3.81e-07!86;UBERON:0007284!3.81e-07!86;UBERON:0000073!8.69e-07!94;UBERON:0001016!8.69e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.48e-23;22!UBERON:0001950;1.79e-21;20!UBERON:0000956;1.40e-20;25!UBERON:0000203;1.40e-20;25!UBERON:0000200;2.19e-13;6!UBERON:0001869;4.50e-13;32!UBERON:0001893;8.45e-13;34!UBERON:0003528;9.63e-13;34!UBERON:0002020;9.63e-13;34!UBERON:0002791;1.60e-12;32!UBERON:0002771;1.18e-10;2!UBERON:0002780;1.96e-09;41!UBERON:0001890;1.96e-09;41!UBERON:0001870;1.14e-07;3!UBERON:0001871;9.82e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.97e-23,22;UBERON:0001950,2.52e-21,20;UBERON:0000956,2.57e-20,25;UBERON:0000203,2.57e-20,25;UBERON:0002791,1.53e-15,32;UBERON:0001869,1.53e-15,32;UBERON:0003528,1.57e-14,34;UBERON:0002020,1.57e-14,34;UBERON:0001893,1.57e-14,34;UBERON:0002780,3.91e-14,41;UBERON:0001890,3.91e-14,41;UBERON:0003080,3.91e-14,41;UBERON:0006240,3.91e-14,41;UBERON:0000200,1.73e-13,6;UBERON:0007023,2.46e-12,114;UBERON:0002771,1.09e-10,2;UBERON:0000073,1.89e-10,53;UBERON:0002616,1.89e-10,53;UBERON:0001049,8.95e-10,56;UBERON:0005068,8.95e-10,56;UBERON:0006241,8.95e-10,56;UBERON:0007135,8.95e-10,56;UBERON:0003056,8.55e-09,61;UBERON:0000955,1.60e-07,68;UBERON:0006238,1.60e-07,68;UBERON:0001870,1.99e-07,3;UBERON:0001871,7.86e-07,6 | |||
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|short_description=p@chr12:124942192..124942204,- | |||
}} |
Revision as of 21:34, 10 September 2013
Short description: | p@chr12:124942192..124942204, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:124942192..124942204, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.63e-12 | 18 |
alpha-beta T cell | 4.63e-12 | 18 |
immature T cell | 4.63e-12 | 18 |
mature T cell | 4.63e-12 | 18 |
immature alpha-beta T cell | 4.63e-12 | 18 |
lymphoid lineage restricted progenitor cell | 6.04e-11 | 52 |
lymphocyte | 1.08e-10 | 53 |
common lymphoid progenitor | 1.08e-10 | 53 |
CD8-positive, alpha-beta T cell | 1.60e-10 | 11 |
mast cell | 1.12e-09 | 5 |
basophil mast progenitor cell | 1.12e-09 | 5 |
T cell | 1.98e-08 | 25 |
pro-T cell | 1.98e-08 | 25 |
hematopoietic lineage restricted progenitor cell | 9.03e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.97e-23 | 22 |
neocortex | 2.52e-21 | 20 |
cerebral cortex | 2.57e-20 | 25 |
pallium | 2.57e-20 | 25 |
regional part of telencephalon | 1.53e-15 | 32 |
cerebral hemisphere | 1.53e-15 | 32 |
brain grey matter | 1.57e-14 | 34 |
gray matter | 1.57e-14 | 34 |
telencephalon | 1.57e-14 | 34 |
regional part of forebrain | 3.91e-14 | 41 |
forebrain | 3.91e-14 | 41 |
anterior neural tube | 3.91e-14 | 41 |
future forebrain | 3.91e-14 | 41 |
gyrus | 1.73e-13 | 6 |
adult organism | 2.46e-12 | 114 |
middle temporal gyrus | 1.09e-10 | 2 |
regional part of nervous system | 1.89e-10 | 53 |
regional part of brain | 1.89e-10 | 53 |
neural tube | 8.95e-10 | 56 |
neural rod | 8.95e-10 | 56 |
future spinal cord | 8.95e-10 | 56 |
neural keel | 8.95e-10 | 56 |
pre-chordal neural plate | 8.55e-09 | 61 |
brain | 1.60e-07 | 68 |
future brain | 1.60e-07 | 68 |
frontal cortex | 1.99e-07 | 3 |
temporal lobe | 7.86e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.