FFCP PHASE1:Hg19::chr14:52780943..52780957,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5732|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9594|TSSclassifier=S|UniProt=P43116|association_with_transcript=-58bp_to_NM_000956,uc001wzr.2_5end|coexpression_cluster_id=C2299|description=CAGE_peak_2_at_PTGER2_5end|id=chr14:52780943..52780957,+|ontology_enrichment_celltype=CL:0002057!4.25e-31!42;CL:0000766!2.44e-28!76;CL:0000557!2.60e-28!71;CL:0000839!1.37e-27!70;CL:0000860!1.94e-27!45;CL:0002194!1.54e-26!63;CL:0000576!1.54e-26!63;CL:0000040!1.54e-26!63;CL:0000559!1.54e-26!63;CL:0002009!6.76e-25!65;CL:0002087!1.07e-23!119;CL:0002031!5.45e-23!124;CL:0000738!1.97e-22!140;CL:0000037!1.19e-17!172;CL:0000566!1.19e-17!172;CL:0000988!2.73e-17!182;CL:0002032!7.49e-17!165;CL:0000837!7.49e-17!165;CL:0000763!1.78e-16!112;CL:0000049!1.78e-16!112;CL:0002320!2.84e-13!365;CL:0000791!6.94e-12!18;CL:0000789!6.94e-12!18;CL:0002420!6.94e-12!18;CL:0002419!6.94e-12!18;CL:0000790!6.94e-12!18;CL:0000134!4.47e-11!358;CL:0000048!1.30e-10!430;CL:0000034!6.30e-10!444;CL:0000723!6.58e-10!436;CL:0000219!2.47e-08!390;CL:0000625!5.02e-08!11;CL:0002393!6.02e-08!9;CL:0002397!6.02e-08!9;CL:0000084!4.71e-07!25;CL:0000827!4.71e-07!25|ontology_enrichment_celltype_v019=CL:0000860;2.13e-34;33!CL:0002057;2.13e-34;33!CL:0000576;3.10e-29;48!CL:0000473;2.37e-25;39!CL:0000234;2.37e-25;39!CL:0000766;1.49e-20;69!CL:0000791;9.87e-18;18!CL:0000789;9.87e-18;18!CL:0002419;9.87e-18;18!CL:0002087;3.73e-14;104!CL:0000625;1.20e-11;11!CL:0000084;3.72e-11;25!CL:0000763;1.88e-09;100!CL:0002393;1.92e-08;6!CL:0002397;1.92e-08;6!CL:0000738;6.82e-08;136|ontology_enrichment_celltype_v019_2=CL:0000860,1.30e-48,42;CL:0002057,1.30e-48,42;CL:0000473,3.60e-44,48;CL:0000234,3.60e-44,48;CL:0000557,6.72e-39,67;CL:0000766,1.57e-38,72;CL:0000839,8.86e-38,66;CL:0002087,1.40e-37,115;CL:0000738,1.02e-36,136;CL:0002194,1.15e-36,59;CL:0000576,1.15e-36,59;CL:0000040,1.15e-36,59;CL:0000559,1.15e-36,59;CL:0002031,3.26e-36,120;CL:0002009,6.66e-35,61;CL:0000037,2.19e-29,168;CL:0000988,6.09e-29,177;CL:0002032,1.91e-27,161;CL:0000837,1.91e-27,161;CL:0000763,2.94e-23,108;CL:0000049,2.94e-23,108;CL:0000791,5.83e-18,18;CL:0000789,5.83e-18,18;CL:0002420,5.83e-18,18;CL:0002419,5.83e-18,18;CL:0000790,5.83e-18,18;CL:0002320,7.71e-18,361;CL:0000134,1.42e-14,354;CL:0000048,1.52e-13,427;CL:0000034,1.80e-13,441;CL:0000723,7.00e-13,433;CL:0000625,7.80e-12,11;CL:0002393,1.04e-11,9;CL:0002397,1.04e-11,9;CL:0000219,1.86e-11,386;CL:0000084,2.62e-11,25;CL:0000827,2.62e-11,25|ontology_enrichment_development_v019=CL:0002057;8.43e-35;42!CL:0000790;9.87e-18;18!CL:0000049;3.27e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.94e-36!102;UBERON:0003061!5.94e-36!102;UBERON:0002193!1.44e-31!112;UBERON:0002371!2.82e-29!80;UBERON:0004765!3.42e-26!101;UBERON:0001434!3.42e-26!101;UBERON:0001474!3.45e-26!86;UBERON:0002204!6.47e-22!167;UBERON:0002405!1.53e-20!115;UBERON:0002384!4.30e-13!375;UBERON:0003081!8.01e-10!216|ontology_enrichment_uberon_v019=UBERON:0000178;1.71e-07;15!UBERON:0000179;1.71e-07;15!UBERON:0000463;1.71e-07;15!UBERON:0002390;9.54e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.01e-46,98;UBERON:0003061,4.01e-46,98;UBERON:0002193,1.52e-39,108;UBERON:0002371,2.02e-39,76;UBERON:0004765,2.39e-39,90;UBERON:0001434,2.03e-38,100;UBERON:0001474,1.55e-36,82;UBERON:0002405,1.16e-32,93;UBERON:0002204,8.24e-28,167;UBERON:0002384,1.94e-16,371;UBERON:0003081,2.07e-15,203;UBERON:0000926,7.41e-14,315;UBERON:0004120,7.41e-14,315;UBERON:0006603,7.41e-14,315;UBERON:0000178,1.72e-07,15;UBERON:0000179,1.72e-07,15;UBERON:0000463,1.72e-07,15;UBERON:0011135,9.25e-07,5;UBERON:0002216,9.25e-07,5;UBERON:0011134,9.25e-07,5;UBERON:0002209,9.25e-07,5;UBERON:0002213,9.25e-07,5;UBERON:0005856,9.25e-07,5;UBERON:0005866,9.25e-07,5;UBERON:0005863,9.25e-07,5;UBERON:0007844,9.25e-07,5;UBERON:0011138,9.25e-07,5;UBERON:0001130,9.25e-07,5;UBERON:0001066,9.25e-07,5;UBERON:0001468,9.25e-07,5|phase1_expression=0,0.214100523890983,0,0,0,0,0,1.89515962028049,0.261185628199839,1.72013755551056,0,0,0.263766978228454,9.2824764720035,7.95353701746998,0,0,0,0,0.123121058076788,1.02000345622126,0.626909442956176,0,0,0.376627918784408,0,0,0.236132343941038,11.8009283054671,5.37361157336098,12.5401059886022,0,0,0,0,0,5.28480790802725,20.4978301156795,23.6642448014767,19.7479892351425,1.56740831967947,1.94336199611388,2.83333124397605,4.07115068582781,2.26725566213286,1.94067248950253,20.9186133215116,14.3908760807639,14.5561994320699,15.8230815777183,12.0395532068677,11.1146648047635,18.2715210790408,12.9096936716765,12.1883837934908,6.40023954444856,5.45812300115692,7.86532195557796,19.8954530041087,8.34415470397843,10.8687311385837,6.59702600373432,4.78712778291916,2.98357325372886,24.3775760448011,20.425868088881,17.4390229718761,13.5674279238641,7.30076085788282,7.60160956467908,15.7403870684676,15.4676607114777,17.4054313092486,5.0701268714866,5.95292039902122,5.031807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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5732 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9594 | |||
|TSSclassifier=S | |||
|UniProt=P43116 | |||
|association_with_transcript=-58bp_to_NM_000956,uc001wzr.2_5end | |||
|coexpression_cluster_id=C2299 | |||
|description=CAGE_peak_2_at_PTGER2_5end | |||
|id=chr14:52780943..52780957,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.25e-31!42;CL:0000766!2.44e-28!76;CL:0000557!2.60e-28!71;CL:0000839!1.37e-27!70;CL:0000860!1.94e-27!45;CL:0002194!1.54e-26!63;CL:0000576!1.54e-26!63;CL:0000040!1.54e-26!63;CL:0000559!1.54e-26!63;CL:0002009!6.76e-25!65;CL:0002087!1.07e-23!119;CL:0002031!5.45e-23!124;CL:0000738!1.97e-22!140;CL:0000037!1.19e-17!172;CL:0000566!1.19e-17!172;CL:0000988!2.73e-17!182;CL:0002032!7.49e-17!165;CL:0000837!7.49e-17!165;CL:0000763!1.78e-16!112;CL:0000049!1.78e-16!112;CL:0002320!2.84e-13!365;CL:0000791!6.94e-12!18;CL:0000789!6.94e-12!18;CL:0002420!6.94e-12!18;CL:0002419!6.94e-12!18;CL:0000790!6.94e-12!18;CL:0000134!4.47e-11!358;CL:0000048!1.30e-10!430;CL:0000034!6.30e-10!444;CL:0000723!6.58e-10!436;CL:0000219!2.47e-08!390;CL:0000625!5.02e-08!11;CL:0002393!6.02e-08!9;CL:0002397!6.02e-08!9;CL:0000084!4.71e-07!25;CL:0000827!4.71e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.13e-34;33!CL:0002057;2.13e-34;33!CL:0000576;3.10e-29;48!CL:0000473;2.37e-25;39!CL:0000234;2.37e-25;39!CL:0000766;1.49e-20;69!CL:0000791;9.87e-18;18!CL:0000789;9.87e-18;18!CL:0002419;9.87e-18;18!CL:0002087;3.73e-14;104!CL:0000625;1.20e-11;11!CL:0000084;3.72e-11;25!CL:0000763;1.88e-09;100!CL:0002393;1.92e-08;6!CL:0002397;1.92e-08;6!CL:0000738;6.82e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.30e-48,42;CL:0002057,1.30e-48,42;CL:0000473,3.60e-44,48;CL:0000234,3.60e-44,48;CL:0000557,6.72e-39,67;CL:0000766,1.57e-38,72;CL:0000839,8.86e-38,66;CL:0002087,1.40e-37,115;CL:0000738,1.02e-36,136;CL:0002194,1.15e-36,59;CL:0000576,1.15e-36,59;CL:0000040,1.15e-36,59;CL:0000559,1.15e-36,59;CL:0002031,3.26e-36,120;CL:0002009,6.66e-35,61;CL:0000037,2.19e-29,168;CL:0000988,6.09e-29,177;CL:0002032,1.91e-27,161;CL:0000837,1.91e-27,161;CL:0000763,2.94e-23,108;CL:0000049,2.94e-23,108;CL:0000791,5.83e-18,18;CL:0000789,5.83e-18,18;CL:0002420,5.83e-18,18;CL:0002419,5.83e-18,18;CL:0000790,5.83e-18,18;CL:0002320,7.71e-18,361;CL:0000134,1.42e-14,354;CL:0000048,1.52e-13,427;CL:0000034,1.80e-13,441;CL:0000723,7.00e-13,433;CL:0000625,7.80e-12,11;CL:0002393,1.04e-11,9;CL:0002397,1.04e-11,9;CL:0000219,1.86e-11,386;CL:0000084,2.62e-11,25;CL:0000827,2.62e-11,25 | |||
|ontology_enrichment_development_v019=CL:0002057;8.43e-35;42!CL:0000790;9.87e-18;18!CL:0000049;3.27e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.94e-36!102;UBERON:0003061!5.94e-36!102;UBERON:0002193!1.44e-31!112;UBERON:0002371!2.82e-29!80;UBERON:0004765!3.42e-26!101;UBERON:0001434!3.42e-26!101;UBERON:0001474!3.45e-26!86;UBERON:0002204!6.47e-22!167;UBERON:0002405!1.53e-20!115;UBERON:0002384!4.30e-13!375;UBERON:0003081!8.01e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.71e-07;15!UBERON:0000179;1.71e-07;15!UBERON:0000463;1.71e-07;15!UBERON:0002390;9.54e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.01e-46,98;UBERON:0003061,4.01e-46,98;UBERON:0002193,1.52e-39,108;UBERON:0002371,2.02e-39,76;UBERON:0004765,2.39e-39,90;UBERON:0001434,2.03e-38,100;UBERON:0001474,1.55e-36,82;UBERON:0002405,1.16e-32,93;UBERON:0002204,8.24e-28,167;UBERON:0002384,1.94e-16,371;UBERON:0003081,2.07e-15,203;UBERON:0000926,7.41e-14,315;UBERON:0004120,7.41e-14,315;UBERON:0006603,7.41e-14,315;UBERON:0000178,1.72e-07,15;UBERON:0000179,1.72e-07,15;UBERON:0000463,1.72e-07,15;UBERON:0011135,9.25e-07,5;UBERON:0002216,9.25e-07,5;UBERON:0011134,9.25e-07,5;UBERON:0002209,9.25e-07,5;UBERON:0002213,9.25e-07,5;UBERON:0005856,9.25e-07,5;UBERON:0005866,9.25e-07,5;UBERON:0005863,9.25e-07,5;UBERON:0007844,9.25e-07,5;UBERON:0011138,9.25e-07,5;UBERON:0001130,9.25e-07,5;UBERON:0001066,9.25e-07,5;UBERON:0001468,9.25e-07,5 | |||
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| |||
|short_description=p2@PTGER2 | |||
}} |
Revision as of 04:45, 11 September 2013
Short description: | p2@PTGER2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PTGER2_5end |
Coexpression cluster: | C2299_Mesenchymal_CD14_CD4_NK_granulocyte_Basophils_Anulus |
Association with transcript: | -58bp_to_NM_000956, uc001wzr.2_5end |
EntrezGene: | PTGER2 |
HGNC: | 9594 |
UniProt: | P43116 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.01e-46 | 98 |
blood island | 4.01e-46 | 98 |
hemolymphoid system | 1.52e-39 | 108 |
bone marrow | 2.02e-39 | 76 |
skeletal element | 2.39e-39 | 90 |
skeletal system | 2.03e-38 | 100 |
bone element | 1.55e-36 | 82 |
immune system | 1.16e-32 | 93 |
musculoskeletal system | 8.24e-28 | 167 |
connective tissue | 1.94e-16 | 371 |
lateral plate mesoderm | 2.07e-15 | 203 |
mesoderm | 7.41e-14 | 315 |
mesoderm-derived structure | 7.41e-14 | 315 |
presumptive mesoderm | 7.41e-14 | 315 |
blood | 1.72e-07 | 15 |
haemolymphatic fluid | 1.72e-07 | 15 |
organism substance | 1.72e-07 | 15 |
intervertebral cartilage | 9.25e-07 | 5 |
symphysis | 9.25e-07 | 5 |
nonsynovial joint | 9.25e-07 | 5 |
fibrous joint | 9.25e-07 | 5 |
cartilaginous joint | 9.25e-07 | 5 |
developing mesenchymal condensation | 9.25e-07 | 5 |
pre-cartilage condensation | 9.25e-07 | 5 |
cartilaginous condensation | 9.25e-07 | 5 |
cartilage element | 9.25e-07 | 5 |
post-cranial axial skeletal system | 9.25e-07 | 5 |
vertebral column | 9.25e-07 | 5 |
intervertebral disk | 9.25e-07 | 5 |
intervertebral joint | 9.25e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.