FFCP PHASE1:Hg19::chr16:81478404..81478430,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24319 | |||
|TSSclassifier=W | |||
|UniProt=Q8IY22 | |||
|association_with_transcript=-344bp_to_ENST00000537098,NM_198390,uc002fgp.2_5end | |||
|description=CAGE_peak_2_at_CMIP_5end | |||
|id=chr16:81478404..81478430,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.58e-13!172;CL:0000566!1.58e-13!172;CL:0000738!1.26e-12!140;CL:0002032!1.73e-12!165;CL:0000837!1.73e-12!165;CL:0000988!1.62e-11!182;CL:0002057!1.25e-10!42;CL:0000860!2.44e-09!45;CL:0000763!3.06e-09!112;CL:0000049!3.06e-09!112;CL:0002087!1.34e-08!119;CL:0002031!4.22e-08!124;CL:0000766!4.43e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.75e-10;33!CL:0002057;2.75e-10;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.20e-14,168;CL:0000738,1.46e-13,136;CL:0002032,2.55e-13,161;CL:0000837,2.55e-13,161;CL:0000988,3.13e-12,177;CL:0000860,1.25e-10,42;CL:0002057,1.25e-10,42;CL:0000763,4.16e-10,108;CL:0000049,4.16e-10,108;CL:0002087,2.18e-09,115;CL:0000766,4.21e-09,72;CL:0002031,7.77e-09,120;CL:0000473,7.38e-08,48;CL:0000234,7.38e-08,48;CL:0000557,3.24e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;2.88e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p2@CMIP | |||
}} |
Revision as of 11:42, 11 September 2013
Short description: | p2@CMIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CMIP_5end |
Coexpression cluster: | NA |
Association with transcript: | -344bp_to_ENST00000537098, NM_198390, uc002fgp.2_5end |
EntrezGene: | CMIP |
HGNC: | 24319 |
UniProt: | Q8IY22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.20e-14 | 168 |
leukocyte | 1.46e-13 | 136 |
hematopoietic oligopotent progenitor cell | 2.55e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.55e-13 | 161 |
hematopoietic cell | 3.13e-12 | 177 |
classical monocyte | 1.25e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-10 | 42 |
myeloid cell | 4.16e-10 | 108 |
common myeloid progenitor | 4.16e-10 | 108 |
nongranular leukocyte | 2.18e-09 | 115 |
myeloid leukocyte | 4.21e-09 | 72 |
hematopoietic lineage restricted progenitor cell | 7.77e-09 | 120 |
defensive cell | 7.38e-08 | 48 |
phagocyte | 7.38e-08 | 48 |
granulocyte monocyte progenitor cell | 3.24e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.51e-20 | 114 |
neural tube | 2.54e-20 | 56 |
neural rod | 2.54e-20 | 56 |
future spinal cord | 2.54e-20 | 56 |
neural keel | 2.54e-20 | 56 |
regional part of nervous system | 2.14e-19 | 53 |
regional part of brain | 2.14e-19 | 53 |
central nervous system | 8.34e-18 | 81 |
regional part of forebrain | 1.40e-16 | 41 |
forebrain | 1.40e-16 | 41 |
anterior neural tube | 1.40e-16 | 41 |
future forebrain | 1.40e-16 | 41 |
neurectoderm | 2.80e-16 | 86 |
brain grey matter | 5.42e-16 | 34 |
gray matter | 5.42e-16 | 34 |
nervous system | 1.63e-15 | 89 |
telencephalon | 2.14e-15 | 34 |
cerebral hemisphere | 2.66e-15 | 32 |
neural plate | 3.11e-15 | 82 |
presumptive neural plate | 3.11e-15 | 82 |
regional part of telencephalon | 6.13e-15 | 32 |
regional part of cerebral cortex | 9.89e-15 | 22 |
brain | 2.60e-14 | 68 |
future brain | 2.60e-14 | 68 |
cerebral cortex | 6.88e-14 | 25 |
pallium | 6.88e-14 | 25 |
neocortex | 1.68e-13 | 20 |
pre-chordal neural plate | 3.24e-12 | 61 |
ecto-epithelium | 1.51e-10 | 104 |
hemolymphoid system | 1.28e-08 | 108 |
hematopoietic system | 5.35e-08 | 98 |
blood island | 5.35e-08 | 98 |
ectoderm-derived structure | 7.42e-07 | 171 |
ectoderm | 7.42e-07 | 171 |
presumptive ectoderm | 7.42e-07 | 171 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.