FFCP PHASE1:Hg19::chr19:40030811..40030848,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=163126 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28292 | |||
|TSSclassifier=S | |||
|UniProt=F5GYE7,Q8N6I1 | |||
|association_with_transcript=0bp_to_ENST00000539700,NM_153232,uc002oma.2_5end | |||
|description=CAGE_peak_2_at_EID2_5end | |||
|id=chr19:40030811..40030848,- | |||
|ontology_enrichment_celltype=CL:0000542!5.49e-13!53;CL:0000051!5.49e-13!53;CL:0000838!7.81e-13!52;CL:0000791!4.13e-11!18;CL:0000789!4.13e-11!18;CL:0002420!4.13e-11!18;CL:0002419!4.13e-11!18;CL:0000790!4.13e-11!18;CL:0000084!9.80e-11!25;CL:0000827!9.80e-11!25;CL:0000625!1.38e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.07e-11;18!CL:0000789;4.07e-11;18!CL:0002419;4.07e-11;18!CL:0000084;8.24e-11;25!CL:0000542;7.36e-08;53!CL:0000625;1.30e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.49e-13,53;CL:0000051,5.49e-13,53;CL:0000838,7.80e-13,52;CL:0000791,4.13e-11,18;CL:0000789,4.13e-11,18;CL:0002420,4.13e-11,18;CL:0002419,4.13e-11,18;CL:0000790,4.13e-11,18;CL:0000084,9.79e-11,25;CL:0000827,9.79e-11,25;CL:0000625,1.38e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;4.07e-11;18!CL:0000051;7.36e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.36e-11!86;UBERON:0001017!1.11e-10!82;UBERON:0000073!4.64e-10!94;UBERON:0001016!4.64e-10!94;UBERON:0001049!2.22e-08!57;UBERON:0005068!2.22e-08!57;UBERON:0006241!2.22e-08!57;UBERON:0007135!2.22e-08!57;UBERON:0000955!2.99e-08!69;UBERON:0006238!2.99e-08!69;UBERON:0002616!1.12e-07!59;UBERON:0002780!2.84e-07!41;UBERON:0001890!2.84e-07!41;UBERON:0006240!2.84e-07!41;UBERON:0002020!4.24e-07!34;UBERON:0003528!4.24e-07!34;UBERON:0003080!5.59e-07!42;UBERON:0003075!6.19e-07!86;UBERON:0007284!6.19e-07!86;UBERON:0001869!6.88e-07!32;UBERON:0001893!7.07e-07!34;UBERON:0002346!7.87e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.96e-11,81;UBERON:0001016,8.81e-10,89;UBERON:0000073,6.45e-09,53;UBERON:0002616,6.45e-09,53;UBERON:0001049,1.14e-08,56;UBERON:0005068,1.14e-08,56;UBERON:0006241,1.14e-08,56;UBERON:0007135,1.14e-08,56;UBERON:0000955,1.69e-08,68;UBERON:0006238,1.69e-08,68;UBERON:0002780,2.75e-07,41;UBERON:0001890,2.75e-07,41;UBERON:0003080,2.75e-07,41;UBERON:0006240,2.75e-07,41;UBERON:0003528,4.11e-07,34;UBERON:0002020,4.11e-07,34;UBERON:0003075,6.55e-07,82;UBERON:0007284,6.55e-07,82;UBERON:0001869,6.65e-07,32;UBERON:0001893,6.84e-07,34;UBERON:0002346,8.50e-07,86 | |||
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| |||
|short_description=p2@EID2 | |||
}} |
Revision as of 20:37, 11 September 2013
Short description: | p2@EID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_EID2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539700, NM_153232, uc002oma.2_5end |
EntrezGene: | EID2 |
HGNC: | 28292 |
UniProt: | F5GYE7Q8N6I1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.49e-13 | 53 |
common lymphoid progenitor | 5.49e-13 | 53 |
lymphoid lineage restricted progenitor cell | 7.80e-13 | 52 |
mature alpha-beta T cell | 4.13e-11 | 18 |
alpha-beta T cell | 4.13e-11 | 18 |
immature T cell | 4.13e-11 | 18 |
mature T cell | 4.13e-11 | 18 |
immature alpha-beta T cell | 4.13e-11 | 18 |
T cell | 9.79e-11 | 25 |
pro-T cell | 9.79e-11 | 25 |
CD8-positive, alpha-beta T cell | 1.38e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.96e-11 | 81 |
nervous system | 8.81e-10 | 89 |
regional part of nervous system | 6.45e-09 | 53 |
regional part of brain | 6.45e-09 | 53 |
neural tube | 1.14e-08 | 56 |
neural rod | 1.14e-08 | 56 |
future spinal cord | 1.14e-08 | 56 |
neural keel | 1.14e-08 | 56 |
brain | 1.69e-08 | 68 |
future brain | 1.69e-08 | 68 |
regional part of forebrain | 2.75e-07 | 41 |
forebrain | 2.75e-07 | 41 |
anterior neural tube | 2.75e-07 | 41 |
future forebrain | 2.75e-07 | 41 |
brain grey matter | 4.11e-07 | 34 |
gray matter | 4.11e-07 | 34 |
neural plate | 6.55e-07 | 82 |
presumptive neural plate | 6.55e-07 | 82 |
cerebral hemisphere | 6.65e-07 | 32 |
telencephalon | 6.84e-07 | 34 |
neurectoderm | 8.50e-07 | 86 |
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