FFCP PHASE1:Hg19::chr1:25254177..25254220,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-73bp_to_EF491807_5end|coexpression_cluster_id=C916|description=CAGE_peak_1_at_EF491807_5end|id=chr1:25254177..25254220,-|ontology_enrichment_celltype=CL:0000738!3.11e-60!140;CL:0000988!2.98e-55!182;CL:0000037!7.13e-55!172;CL:0000566!7.13e-55!172;CL:0002032!1.16e-53!165;CL:0000837!1.16e-53!165;CL:0002087!8.31e-51!119;CL:0002031!1.68e-49!124;CL:0002057!3.46e-28!42;CL:0000766!1.23e-27!76;CL:0000763!5.02e-27!112;CL:0000049!5.02e-27!112;CL:0000860!5.05e-25!45;CL:0000542!5.68e-25!53;CL:0000051!5.68e-25!53;CL:0000838!7.23e-25!52;CL:0000557!3.61e-24!71;CL:0002009!1.60e-23!65;CL:0000839!3.39e-22!70;CL:0002194!3.49e-22!63;CL:0000576!3.49e-22!63;CL:0000040!3.49e-22!63;CL:0000559!3.49e-22!63;CL:0000084!1.99e-16!25;CL:0000827!1.99e-16!25;CL:0000791!8.91e-15!18;CL:0000789!8.91e-15!18;CL:0002420!8.91e-15!18;CL:0002419!8.91e-15!18;CL:0000790!8.91e-15!18;CL:0000134!2.39e-13!358;CL:0002320!3.05e-13!365;CL:0000219!8.49e-12!390;CL:0000625!4.77e-10!11;CL:0000945!7.01e-08!24;CL:0000826!7.01e-08!24|ontology_enrichment_celltype_v019=CL:0000860;1.62e-34;33!CL:0002057;1.62e-34;33!CL:0000791;1.09e-26;18!CL:0000789;1.09e-26;18!CL:0002419;1.09e-26;18!CL:0000473;1.56e-26;39!CL:0000234;1.56e-26;39!CL:0000084;1.98e-24;25!CL:0002087;6.44e-23;104!CL:0000576;4.84e-21;48!CL:0000542;2.73e-18;53!CL:0000625;1.43e-17;11!CL:0000738;1.68e-15;136!CL:0000766;1.09e-14;69!CL:0000988;1.14e-12;177!CL:0000945;1.19e-10;24!CL:0000763;3.11e-10;100!CL:0000624;9.05e-10;6!CL:0000453;1.30e-08;5!CL:0000219;1.13e-07;193!CL:0000094;1.59e-07;8!CL:0000623;7.02e-07;3!CL:0000081;7.55e-07;11|ontology_enrichment_celltype_v019_2=CL:0000738,3.04e-79,136;CL:0000037,7.86e-71,168;CL:0002087,2.73e-69,115;CL:0000988,4.85e-69,177;CL:0002032,7.88e-69,161;CL:0000837,7.88e-69,161;CL:0002031,8.98e-65,120;CL:0000860,5.55e-39,42;CL:0002057,5.55e-39,42;CL:0000838,3.52e-37,52;CL:0000473,1.07e-36,48;CL:0000234,1.07e-36,48;CL:0000542,3.09e-36,53;CL:0000051,3.09e-36,53;CL:0000766,1.97e-31,72;CL:0000763,3.46e-31,108;CL:0000049,3.46e-31,108;CL:0002009,3.09e-29,61;CL:0000557,3.93e-27,67;CL:0002194,5.91e-27,59;CL:0000576,5.91e-27,59;CL:0000040,5.91e-27,59;CL:0000559,5.91e-27,59;CL:0000791,1.22e-26,18;CL:0000789,1.22e-26,18;CL:0002420,1.22e-26,18;CL:0002419,1.22e-26,18;CL:0000790,1.22e-26,18;CL:0000084,2.02e-24,25;CL:0000827,2.02e-24,25;CL:0000839,2.05e-24,66;CL:0000134,6.48e-21,354;CL:0000219,5.01e-20,386;CL:0002320,5.36e-20,361;CL:0000625,1.19e-17,11;CL:0000048,6.38e-13,427;CL:0000723,2.14e-12,433;CL:0000034,3.29e-12,441;CL:0000945,1.40e-10,24;CL:0000826,1.40e-10,24;CL:0000624,9.77e-10,6;CL:0000453,1.38e-08,5;CL:0000094,1.49e-07,8;CL:0000623,7.17e-07,3;CL:0000825,7.17e-07,3;CL:0000081,7.72e-07,11|ontology_enrichment_development_v019=CL:0002057;2.57e-28;42!CL:0000790;1.09e-26;18!CL:0000051;2.73e-18;53!CL:0000049;4.96e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.42e-32!102;UBERON:0003061!7.42e-32!102;UBERON:0002193!3.08e-28!112;UBERON:0002371!6.60e-20!80;UBERON:0001474!6.86e-20!86;UBERON:0004765!3.47e-17!101;UBERON:0001434!3.47e-17!101;UBERON:0002405!4.52e-13!115;UBERON:0002384!1.90e-12!375;UBERON:0000178!1.52e-10!15;UBERON:0000179!1.52e-10!15;UBERON:0000463!1.52e-10!15|ontology_enrichment_uberon_v019=UBERON:0000178;6.43e-15;15!UBERON:0000179;6.43e-15;15!UBERON:0000463;6.43e-15;15!UBERON:0002390;5.33e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.75e-37,98;UBERON:0003061,7.75e-37,98;UBERON:0002193,2.60e-33,108;UBERON:0002371,8.59e-24,76;UBERON:0002405,7.08e-22,93;UBERON:0001474,3.63e-21,82;UBERON:0002384,9.47e-19,371;UBERON:0004765,3.15e-18,90;UBERON:0001434,3.01e-15,100;UBERON:0000178,6.87e-15,15;UBERON:0000179,6.87e-15,15;UBERON:0000463,6.87e-15,15;UBERON:0003081,7.03e-11,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,5.9602456483402,4.26923065139718,4.5652253161934,3.54027849164014,11.1310525448192,5.10893206943051,0,0,0,0.0774672005803016,1.27952309238679,0,2.76997704265939,9.02450013615638,4.77423915574874,0,0,0.257575567634187,13.2312397289404,10.9584023669755,11.4014508758274,10.2268776238501,5.75635043230556,3.71647645074124,9.49384894663097,12.5518746199259,5.67557351732605,2.75796544589295,1.93645405075148,5.41705946377367,13.9299331261527,7.09555990150399,4.71919317334678,4.89734227793444,4.49300637906531,11.5080682643827,17.8119702100827,12.5662104301628,16.1965405202424,3.19230162491442,1.13477044938228,2.4912889959823,7.03496262718881,11.9941071236646,3.47502151528187,1.81619850790011,0.736555271975129,1.58231193720442,1.69004229049553,0.850417199860174,0,0.44931452458598,0.300353785683013,0.48217676009124,0.285012743741249,1.39241674039363,0.547992461293902,0,0,0,0.853460445133014,0.400395987036012,1.14950487990897,1.32208974556972,0,0.569212969109448,4.69789751496751,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-73bp_to_EF491807_5end | |||
|coexpression_cluster_id=C916 | |||
|description=CAGE_peak_1_at_EF491807_5end | |||
|id=chr1:25254177..25254220,- | |||
|ontology_enrichment_celltype=CL:0000738!3.11e-60!140;CL:0000988!2.98e-55!182;CL:0000037!7.13e-55!172;CL:0000566!7.13e-55!172;CL:0002032!1.16e-53!165;CL:0000837!1.16e-53!165;CL:0002087!8.31e-51!119;CL:0002031!1.68e-49!124;CL:0002057!3.46e-28!42;CL:0000766!1.23e-27!76;CL:0000763!5.02e-27!112;CL:0000049!5.02e-27!112;CL:0000860!5.05e-25!45;CL:0000542!5.68e-25!53;CL:0000051!5.68e-25!53;CL:0000838!7.23e-25!52;CL:0000557!3.61e-24!71;CL:0002009!1.60e-23!65;CL:0000839!3.39e-22!70;CL:0002194!3.49e-22!63;CL:0000576!3.49e-22!63;CL:0000040!3.49e-22!63;CL:0000559!3.49e-22!63;CL:0000084!1.99e-16!25;CL:0000827!1.99e-16!25;CL:0000791!8.91e-15!18;CL:0000789!8.91e-15!18;CL:0002420!8.91e-15!18;CL:0002419!8.91e-15!18;CL:0000790!8.91e-15!18;CL:0000134!2.39e-13!358;CL:0002320!3.05e-13!365;CL:0000219!8.49e-12!390;CL:0000625!4.77e-10!11;CL:0000945!7.01e-08!24;CL:0000826!7.01e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-34;33!CL:0002057;1.62e-34;33!CL:0000791;1.09e-26;18!CL:0000789;1.09e-26;18!CL:0002419;1.09e-26;18!CL:0000473;1.56e-26;39!CL:0000234;1.56e-26;39!CL:0000084;1.98e-24;25!CL:0002087;6.44e-23;104!CL:0000576;4.84e-21;48!CL:0000542;2.73e-18;53!CL:0000625;1.43e-17;11!CL:0000738;1.68e-15;136!CL:0000766;1.09e-14;69!CL:0000988;1.14e-12;177!CL:0000945;1.19e-10;24!CL:0000763;3.11e-10;100!CL:0000624;9.05e-10;6!CL:0000453;1.30e-08;5!CL:0000219;1.13e-07;193!CL:0000094;1.59e-07;8!CL:0000623;7.02e-07;3!CL:0000081;7.55e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.04e-79,136;CL:0000037,7.86e-71,168;CL:0002087,2.73e-69,115;CL:0000988,4.85e-69,177;CL:0002032,7.88e-69,161;CL:0000837,7.88e-69,161;CL:0002031,8.98e-65,120;CL:0000860,5.55e-39,42;CL:0002057,5.55e-39,42;CL:0000838,3.52e-37,52;CL:0000473,1.07e-36,48;CL:0000234,1.07e-36,48;CL:0000542,3.09e-36,53;CL:0000051,3.09e-36,53;CL:0000766,1.97e-31,72;CL:0000763,3.46e-31,108;CL:0000049,3.46e-31,108;CL:0002009,3.09e-29,61;CL:0000557,3.93e-27,67;CL:0002194,5.91e-27,59;CL:0000576,5.91e-27,59;CL:0000040,5.91e-27,59;CL:0000559,5.91e-27,59;CL:0000791,1.22e-26,18;CL:0000789,1.22e-26,18;CL:0002420,1.22e-26,18;CL:0002419,1.22e-26,18;CL:0000790,1.22e-26,18;CL:0000084,2.02e-24,25;CL:0000827,2.02e-24,25;CL:0000839,2.05e-24,66;CL:0000134,6.48e-21,354;CL:0000219,5.01e-20,386;CL:0002320,5.36e-20,361;CL:0000625,1.19e-17,11;CL:0000048,6.38e-13,427;CL:0000723,2.14e-12,433;CL:0000034,3.29e-12,441;CL:0000945,1.40e-10,24;CL:0000826,1.40e-10,24;CL:0000624,9.77e-10,6;CL:0000453,1.38e-08,5;CL:0000094,1.49e-07,8;CL:0000623,7.17e-07,3;CL:0000825,7.17e-07,3;CL:0000081,7.72e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.57e-28;42!CL:0000790;1.09e-26;18!CL:0000051;2.73e-18;53!CL:0000049;4.96e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.42e-32!102;UBERON:0003061!7.42e-32!102;UBERON:0002193!3.08e-28!112;UBERON:0002371!6.60e-20!80;UBERON:0001474!6.86e-20!86;UBERON:0004765!3.47e-17!101;UBERON:0001434!3.47e-17!101;UBERON:0002405!4.52e-13!115;UBERON:0002384!1.90e-12!375;UBERON:0000178!1.52e-10!15;UBERON:0000179!1.52e-10!15;UBERON:0000463!1.52e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.43e-15;15!UBERON:0000179;6.43e-15;15!UBERON:0000463;6.43e-15;15!UBERON:0002390;5.33e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.75e-37,98;UBERON:0003061,7.75e-37,98;UBERON:0002193,2.60e-33,108;UBERON:0002371,8.59e-24,76;UBERON:0002405,7.08e-22,93;UBERON:0001474,3.63e-21,82;UBERON:0002384,9.47e-19,371;UBERON:0004765,3.15e-18,90;UBERON:0001434,3.01e-15,100;UBERON:0000178,6.87e-15,15;UBERON:0000179,6.87e-15,15;UBERON:0000463,6.87e-15,15;UBERON:0003081,7.03e-11,203 | |||
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| |||
|short_description=p1@EF491807 | |||
}} |
Revision as of 04:52, 12 September 2013
Short description: | p1@EF491807 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_EF491807_5end |
Coexpression cluster: | C916_Natural_CD8_CD14_Basophils_Whole_Peripheral_CD4 |
Association with transcript: | -73bp_to_EF491807_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.75e-37 | 98 |
blood island | 7.75e-37 | 98 |
hemolymphoid system | 2.60e-33 | 108 |
bone marrow | 8.59e-24 | 76 |
immune system | 7.08e-22 | 93 |
bone element | 3.63e-21 | 82 |
connective tissue | 9.47e-19 | 371 |
skeletal element | 3.15e-18 | 90 |
skeletal system | 3.01e-15 | 100 |
blood | 6.87e-15 | 15 |
haemolymphatic fluid | 6.87e-15 | 15 |
organism substance | 6.87e-15 | 15 |
lateral plate mesoderm | 7.03e-11 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.