FFCP PHASE1:Hg19::chr20:17402931..17402956,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4014|description=CAGE_peak_at_chr20:17402931..17402956,+|id=chr20:17402931..17402956,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;5.33e-23;10!DOID:3095;7.29e-11;22!DOID:2994;7.29e-11;22|ontology_enrichment_disease_v019_2=DOID:171,5.96e-23,10;DOID:3095,7.66e-11,22;DOID:2994,7.66e-11,22|ontology_enrichment_uberon=UBERON:0001049!3.19e-52!57;UBERON:0005068!3.19e-52!57;UBERON:0006241!3.19e-52!57;UBERON:0007135!3.19e-52!57;UBERON:0002616!2.12e-46!59;UBERON:0000955!6.61e-45!69;UBERON:0006238!6.61e-45!69;UBERON:0002780!3.82e-44!41;UBERON:0001890!3.82e-44!41;UBERON:0006240!3.82e-44!41;UBERON:0003080!5.31e-43!42;UBERON:0002346!2.73e-42!90;UBERON:0001869!1.24e-41!32;UBERON:0001017!6.67e-40!82;UBERON:0002020!3.84e-39!34;UBERON:0003528!3.84e-39!34;UBERON:0001893!5.21e-39!34;UBERON:0003075!3.22e-38!86;UBERON:0007284!3.22e-38!86;UBERON:0005743!8.70e-38!86;UBERON:0000073!1.94e-36!94;UBERON:0001016!1.94e-36!94;UBERON:0002791!6.86e-36!33;UBERON:0003056!2.75e-34!61;UBERON:0002619!7.65e-32!22;UBERON:0001950!5.54e-30!20;UBERON:0000956!7.78e-28!25;UBERON:0000203!7.78e-28!25;UBERON:0000033!1.17e-26!123;UBERON:0000153!3.98e-25!129;UBERON:0007811!3.98e-25!129;UBERON:0000924!3.04e-23!173;UBERON:0006601!3.04e-23!173;UBERON:0007023!4.40e-23!115;UBERON:0004121!1.61e-20!169;UBERON:0000200!1.92e-19!6;UBERON:0002771!5.75e-15!3;UBERON:0001871!1.38e-14!7;UBERON:0000025!2.27e-13!194;UBERON:0002420!1.02e-12!9;UBERON:0007245!1.02e-12!9;UBERON:0010009!1.02e-12!9;UBERON:0010011!1.02e-12!9;UBERON:0000454!1.02e-12!9;UBERON:0002308!1.10e-12!9;UBERON:0000125!1.10e-12!9;UBERON:0000369!4.34e-11!4;UBERON:0002435!4.34e-11!4;UBERON:0000204!4.34e-11!4;UBERON:0010082!4.34e-11!4;UBERON:0009663!9.11e-11!7;UBERON:0001905!1.19e-10!2;UBERON:0002757!1.19e-10!2;UBERON:0010134!1.19e-10!2;UBERON:0002784!1.19e-10!2;UBERON:0005408!1.19e-10!2;UBERON:0001899!1.19e-10!2;UBERON:0003076!2.01e-10!15;UBERON:0003057!2.01e-10!15;UBERON:0001870!3.06e-10!2;UBERON:0000064!5.07e-10!219;UBERON:0000483!9.31e-10!309;UBERON:0000119!1.36e-09!312;UBERON:0004111!1.59e-09!241;UBERON:0001872!2.16e-09!5;UBERON:0004733!2.41e-09!12;UBERON:0002028!2.41e-09!12;UBERON:0007277!2.41e-09!12;UBERON:0000349!1.06e-08!5;UBERON:0004732!1.33e-08!13;UBERON:0000477!1.38e-08!286;UBERON:0002680!2.01e-08!9;UBERON:0001895!2.01e-08!9;UBERON:0010092!2.01e-08!9;UBERON:0005383!2.37e-07!3;UBERON:0005382!2.37e-07!3;UBERON:0000475!3.44e-07!365;UBERON:0000988!7.58e-07!3|ontology_enrichment_uberon_v019=UBERON:0002346;9.82e-26;4!UBERON:0000923;9.82e-26;4!UBERON:0010316;9.82e-26;4!UBERON:0005291;9.82e-26;4!UBERON:0002050;8.13e-21;5!UBERON:0005423;8.13e-21;5!UBERON:0001872;1.04e-20;5!UBERON:0002771;1.07e-13;2!UBERON:0001905;1.37e-13;2!UBERON:0002757;1.37e-13;2!UBERON:0010134;1.37e-13;2!UBERON:0005408;1.37e-13;2!UBERON:0001899;1.37e-13;2!UBERON:0001950;2.75e-11;20!UBERON:0002619;2.30e-10;22!UBERON:0000956;3.03e-09;25!UBERON:0000203;3.03e-09;25!UBERON:0002780;1.03e-07;41!UBERON:0001890;1.03e-07;41!UBERON:0003296;1.92e-07;4!UBERON:0010133;1.92e-07;4!UBERON:0002784;1.92e-07;4!UBERON:0003528;6.36e-07;34!UBERON:0002020;6.36e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0001872,9.93e-21,5;UBERON:0002771,1.07e-13,2;UBERON:0001905,1.21e-13,2;UBERON:0002757,1.21e-13,2;UBERON:0010134,1.21e-13,2;UBERON:0005408,1.21e-13,2;UBERON:0001899,1.21e-13,2;UBERON:0001950,2.70e-11,20;UBERON:0002619,2.26e-10,22;UBERON:0002346,2.44e-10,86;UBERON:0002780,7.40e-10,41;UBERON:0001890,7.40e-10,41;UBERON:0003080,7.40e-10,41;UBERON:0006240,7.40e-10,41;UBERON:0000956,2.99e-09,25;UBERON:0000203,2.99e-09,25;UBERON:0000073,9.43e-08,53;UBERON:0002616,9.43e-08,53;UBERON:0003296,1.80e-07,4;UBERON:0010133,1.80e-07,4;UBERON:0002784,1.80e-07,4;UBERON:0002791,2.03e-07,32;UBERON:0001869,2.03e-07,32;UBERON:0001049,2.31e-07,56;UBERON:0005068,2.31e-07,56;UBERON:0006241,2.31e-07,56;UBERON:0007135,2.31e-07,56;UBERON:0003528,4.98e-07,34;UBERON:0002020,4.98e-07,34;UBERON:0001893,4.98e-07,34;UBERON:0004121,6.00e-07,171;UBERON:0000924,6.00e-07,171;UBERON:0006601,6.00e-07,171;UBERON:0001016,6.05e-07,89;UBERON:0003056,8.52e-07,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4014 | |||
|description=CAGE_peak_at_chr20:17402931..17402956,+ | |||
|id=chr20:17402931..17402956,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;5.33e-23;10!DOID:3095;7.29e-11;22!DOID:2994;7.29e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.96e-23,10;DOID:3095,7.66e-11,22;DOID:2994,7.66e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.19e-52!57;UBERON:0005068!3.19e-52!57;UBERON:0006241!3.19e-52!57;UBERON:0007135!3.19e-52!57;UBERON:0002616!2.12e-46!59;UBERON:0000955!6.61e-45!69;UBERON:0006238!6.61e-45!69;UBERON:0002780!3.82e-44!41;UBERON:0001890!3.82e-44!41;UBERON:0006240!3.82e-44!41;UBERON:0003080!5.31e-43!42;UBERON:0002346!2.73e-42!90;UBERON:0001869!1.24e-41!32;UBERON:0001017!6.67e-40!82;UBERON:0002020!3.84e-39!34;UBERON:0003528!3.84e-39!34;UBERON:0001893!5.21e-39!34;UBERON:0003075!3.22e-38!86;UBERON:0007284!3.22e-38!86;UBERON:0005743!8.70e-38!86;UBERON:0000073!1.94e-36!94;UBERON:0001016!1.94e-36!94;UBERON:0002791!6.86e-36!33;UBERON:0003056!2.75e-34!61;UBERON:0002619!7.65e-32!22;UBERON:0001950!5.54e-30!20;UBERON:0000956!7.78e-28!25;UBERON:0000203!7.78e-28!25;UBERON:0000033!1.17e-26!123;UBERON:0000153!3.98e-25!129;UBERON:0007811!3.98e-25!129;UBERON:0000924!3.04e-23!173;UBERON:0006601!3.04e-23!173;UBERON:0007023!4.40e-23!115;UBERON:0004121!1.61e-20!169;UBERON:0000200!1.92e-19!6;UBERON:0002771!5.75e-15!3;UBERON:0001871!1.38e-14!7;UBERON:0000025!2.27e-13!194;UBERON:0002420!1.02e-12!9;UBERON:0007245!1.02e-12!9;UBERON:0010009!1.02e-12!9;UBERON:0010011!1.02e-12!9;UBERON:0000454!1.02e-12!9;UBERON:0002308!1.10e-12!9;UBERON:0000125!1.10e-12!9;UBERON:0000369!4.34e-11!4;UBERON:0002435!4.34e-11!4;UBERON:0000204!4.34e-11!4;UBERON:0010082!4.34e-11!4;UBERON:0009663!9.11e-11!7;UBERON:0001905!1.19e-10!2;UBERON:0002757!1.19e-10!2;UBERON:0010134!1.19e-10!2;UBERON:0002784!1.19e-10!2;UBERON:0005408!1.19e-10!2;UBERON:0001899!1.19e-10!2;UBERON:0003076!2.01e-10!15;UBERON:0003057!2.01e-10!15;UBERON:0001870!3.06e-10!2;UBERON:0000064!5.07e-10!219;UBERON:0000483!9.31e-10!309;UBERON:0000119!1.36e-09!312;UBERON:0004111!1.59e-09!241;UBERON:0001872!2.16e-09!5;UBERON:0004733!2.41e-09!12;UBERON:0002028!2.41e-09!12;UBERON:0007277!2.41e-09!12;UBERON:0000349!1.06e-08!5;UBERON:0004732!1.33e-08!13;UBERON:0000477!1.38e-08!286;UBERON:0002680!2.01e-08!9;UBERON:0001895!2.01e-08!9;UBERON:0010092!2.01e-08!9;UBERON:0005383!2.37e-07!3;UBERON:0005382!2.37e-07!3;UBERON:0000475!3.44e-07!365;UBERON:0000988!7.58e-07!3 | |||
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|short_description=p@chr20:17402931..17402956,+ | |||
}} |
Revision as of 07:34, 12 September 2013
Short description: | p@chr20:17402931..17402956, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:17402931..17402956, + |
Coexpression cluster: | C4014_neuroectodermal_neuroblastoma_smallcell_gastrointestinal_peripheral_thyroid_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.96e-23 | 10 |
germ cell and embryonal cancer | 7.66e-11 | 22 |
germ cell cancer | 7.66e-11 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.