FFCP PHASE1:Hg19::chr20:22565370..22565388,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3170|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5022|TSSclassifier=S|UniProt=Q9Y261,B0ZTD4|association_with_transcript=-269bp_to_ENST00000319993,ENST00000419308,NM_021784,uc002wsm.2_5end|coexpression_cluster_id=C4016|description=CAGE_peak_2_at_FOXA2_5end|id=chr20:22565370..22565388,-|ontology_enrichment_celltype=CL:0000066!1.71e-21!254;CL:0000223!7.82e-21!59;CL:0002076!1.92e-16!43;CL:0002368!1.81e-14!13;CL:0000082!2.34e-10!19;CL:0002202!8.29e-10!9;CL:0002632!8.29e-10!9|ontology_enrichment_celltype_v019=CL:0002368;5.19e-23;13!CL:0002202;1.87e-15;9!CL:0002632;1.87e-15;9!CL:0000082;4.70e-15;19!CL:0002076;5.52e-15;42!CL:0002328;7.37e-08;3!CL:0000307;1.25e-07;3|ontology_enrichment_celltype_v019_2=CL:0000223,1.06e-23,58;CL:0002368,3.80e-23,13;CL:0000066,2.32e-21,253;CL:0002076,8.45e-19,42;CL:0002202,1.88e-15,9;CL:0002632,1.88e-15,9;CL:0000082,4.02e-15,19;CL:0002328,6.12e-08,3;CL:0000068,1.51e-07,3;CL:0000069,1.51e-07,3;CL:0000307,1.51e-07,3;CL:0000377,1.51e-07,3|ontology_enrichment_development_v019=UBERON:0001041;4.04e-23;30!UBERON:0009497;3.65e-16;13!CL:0000223;2.12e-14;58!UBERON:0004161;1.65e-12;11!CL:0000377;1.25e-07;3|ontology_enrichment_disease=DOID:305!3.45e-18!106;DOID:0050687!2.01e-12!143;DOID:162!3.21e-08!235;DOID:14566!1.04e-07!239;DOID:0050615!1.76e-07!16|ontology_enrichment_disease_v019=DOID:0050615;1.74e-10;16!DOID:1324;9.34e-09;15!DOID:305;8.76e-08;106!DOID:3119;1.43e-07;14|ontology_enrichment_disease_v019_2=DOID:305,8.42e-17,106;DOID:0050687,7.47e-12,143;DOID:0050615,1.70e-10,16;DOID:1324,9.15e-09,15;DOID:3119,1.52e-07,14|ontology_enrichment_uberon=UBERON:0004119!3.59e-31!169;UBERON:0000925!3.59e-31!169;UBERON:0006595!3.59e-31!169;UBERON:0001007!2.61e-29!155;UBERON:0001555!2.61e-29!155;UBERON:0007026!2.61e-29!155;UBERON:0004921!6.64e-27!129;UBERON:0004185!6.64e-27!129;UBERON:0005911!1.38e-23!82;UBERON:0000077!3.72e-22!130;UBERON:0000466!2.49e-19!126;UBERON:0001041!9.35e-19!98;UBERON:0005177!2.13e-16!107;UBERON:0001048!2.03e-14!168;UBERON:0005178!2.25e-14!34;UBERON:0002224!2.25e-14!34;UBERON:0005153!8.37e-14!37;UBERON:0005181!9.21e-14!35;UBERON:0002048!3.57e-13!22;UBERON:0000117!3.57e-13!22;UBERON:0000171!3.57e-13!22;UBERON:0000170!3.57e-13!22;UBERON:0005597!3.57e-13!22;UBERON:0000118!3.57e-13!22;UBERON:0003929!4.63e-13!54;UBERON:0000065!1.28e-12!53;UBERON:0000464!3.31e-12!104;UBERON:0009497!1.15e-11!25;UBERON:0000015!1.15e-11!25;UBERON:0002423!1.15e-11!25;UBERON:0006235!1.15e-11!25;UBERON:0004161!1.15e-11!25;UBERON:0005409!2.79e-11!35;UBERON:0009856!4.02e-11!26;UBERON:0001004!4.26e-11!72;UBERON:0000160!4.47e-11!27;UBERON:0008947!9.44e-11!38;UBERON:0003258!9.44e-11!38;UBERON:0007499!1.80e-10!25;UBERON:0004802!2.34e-10!19;UBERON:0000115!2.34e-10!19;UBERON:0005157!3.50e-10!51;UBERON:0009854!7.30e-10!23;UBERON:0009569!3.17e-09!113;UBERON:0008835!3.23e-09!22;UBERON:0003894!3.23e-09!22;UBERON:0004807!9.04e-09!28;UBERON:0003104!2.54e-08!238;UBERON:0009142!2.54e-08!238;UBERON:0007196!3.13e-08!14;UBERON:0001558!3.13e-08!14;UBERON:0000072!1.40e-07!46;UBERON:0000949!1.61e-07!45;UBERON:0000481!1.66e-07!347;UBERON:0000344!1.74e-07!12;UBERON:0000915!3.75e-07!52;UBERON:0002108!4.13e-07!14;UBERON:0002107!8.45e-07!19;UBERON:0006925!8.45e-07!19;UBERON:0008836!8.45e-07!19|ontology_enrichment_uberon_v019=UBERON:0002048;2.92e-17;22!UBERON:0000117;2.92e-17;22!UBERON:0000171;2.92e-17;22!UBERON:0000170;2.92e-17;22!UBERON:0005178;3.89e-15;34!UBERON:0002224;3.89e-15;34!UBERON:0004802;4.70e-15;19!UBERON:0000115;4.70e-15;19!UBERON:0005181;6.97e-15;35!UBERON:0004807;1.34e-12;22!UBERON:0000065;1.59e-12;44!UBERON:0002423;1.15e-10;25!UBERON:0005409;1.25e-09;22!UBERON:0000072;6.24e-09;37!UBERON:0005911;7.68e-09;36!UBERON:0007196;1.17e-08;15!UBERON:0001558;1.17e-08;15!UBERON:0000485;3.75e-08;7!UBERON:0004815;7.37e-08;3!UBERON:0002031;7.37e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0004921,4.75e-24,118;UBERON:0004119,3.16e-22,160;UBERON:0000925,3.16e-22,160;UBERON:0006595,3.16e-22,160;UBERON:0001007,8.81e-21,145;UBERON:0001555,8.81e-21,145;UBERON:0007026,8.81e-21,145;UBERON:0001041,1.80e-18,87;UBERON:0005911,2.96e-18,82;UBERON:0005178,2.18e-17,34;UBERON:0002224,2.18e-17,34;UBERON:0002048,2.53e-17,22;UBERON:0000117,2.53e-17,22;UBERON:0000171,2.53e-17,22;UBERON:0000170,2.53e-17,22;UBERON:0005597,2.53e-17,22;UBERON:0000118,2.53e-17,22;UBERON:0005177,8.13e-17,101;UBERON:0005181,9.46e-17,35;UBERON:0005153,1.59e-15,37;UBERON:0004802,4.02e-15,19;UBERON:0000115,4.02e-15,19;UBERON:0000065,1.19e-14,54;UBERON:0005157,2.99e-14,47;UBERON:0008947,3.40e-13,38;UBERON:0003258,3.40e-13,38;UBERON:0007499,1.01e-10,25;UBERON:0009497,1.50e-10,25;UBERON:0000015,1.50e-10,25;UBERON:0002423,1.50e-10,25;UBERON:0006235,1.50e-10,25;UBERON:0004161,1.50e-10,25;UBERON:0001004,2.53e-10,74;UBERON:0009856,3.37e-10,26;UBERON:0000915,9.82e-10,52;UBERON:0009569,2.01e-09,112;UBERON:0004807,2.47e-09,28;UBERON:0011216,3.72e-09,223;UBERON:0008835,1.15e-08,22;UBERON:0003894,1.15e-08,22;UBERON:0007196,1.17e-08,15;UBERON:0001558,1.17e-08,15;UBERON:0000072,1.20e-08,47;UBERON:0005409,2.66e-08,25;UBERON:0009854,3.38e-08,23;UBERON:0001048,5.40e-08,160;UBERON:0004815,6.12e-08,3;UBERON:0002031,6.12e-08,3;UBERON:0003929,6.15e-08,54;UBERON:0002100,3.80e-07,199|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,9.07141518364156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,2.75826367343678,3.91567694411725,19.9667165490065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,3.27865759463288,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79703457356788,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0,0,0,2.32387885739037,0.414644220061482,1.7662459561294,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,4.72631925345123,0,2.95172252503473,0,0.329250856225877,12.3641928583382,0,4.81459914824354,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.708875486211932,0.985143749731331,2.90633938513962,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62578348774867,0,7.82688405955119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,2.16386124460217,1.46511143709349,0.990113999047056,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,1.81813406897076,3.84380134730212,1.53135254993501,13.3528270729326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19599408717765,1.34060455107157,6.53345909167936,2.2594512186427,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0,0,0,0,0,0,0,0,0,0.111308705022906,0,50.0367217263344,0.398495976502139,0.276283915531148,21.6662163154677,0,0.123084805461069,0,4.13394415277704,2.32727527078292,0,0,0,0,0,0,0,0,0,0,1.365521379426,5.33932665614809,1.65471377237555,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.384751292518985,0,0,0,0,0,0.0915975934018623,0,0,0,0,0.451191321234361,0.19606253431774,0,0,0,0.210998064528027,1.46909527343233,2.54435528581093,0,3.98104772431402,0.884575645033392,5.49927130440263,0,0,0,0,0,0,0,1.76098157038881,0,0,7.25944296291983,0,0,0.150323419414493,0.933193722575224,1.99396161812156,0.992975867626496,1.56966459203613,3.58417289318877,0,0,0,0.489961987071888,0,0,0,0,0,0,0,2.47117154736201,0,0,0,0,0.391102765469606,1.20238230377301,2.13452994739353,0,6.62815918908888,0,98.8387187684916,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,13.9795139432945,5.35725639689121,4.78011978610765,6.87516147312686,1.08270229666224,0,0,0,1.44677833618517,0,0,0,0,0,0,0,0,0,0,1.72723677587501,0,0,0,0,0,0,0,0.656740165994712,0,0,4.68967147769864,2.65013777824443,0,0.13223260174269,3.07956308191793,0,0.854299300541557,1.41483874589699,3.72815149812476,0,0,0,0,0,0,0,0,53.8695550138304,0,0,0,0,0,0,0,1.24980407962107,0,0,5.41111385305795,0,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0,0.429642228169954,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.76872455576384,0,0,0,0,0,0,0,0,5.4941152073243,0,0,0,0,0,8.95228849404445,5.59869534029676,0,0,0,0,0,0,0,0,0,0,12.8091319725675,0,0,0,0,0,0,0,0,0,0,0,0.943757786781923,0.366857197043358,3.46576998451015,0,2.0710797781803,0.596748666348824,0.225630985047772,0,6.25211208986474,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.685952037749674,0,0,0.118193840883968,1.55723962648897,0.078493092850514,0,1.12108865325516,1.82631744101899,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,1.00669888618013,2.65005630761156,0.365753774946808,0,0.102662806856247,0,0,31.11394864046,36.209041079369,0,11.407554285935,0.549702583727146,12.3789531724672,0.540219106755613,1.31135736302374,32.9222107453066,0,12.0195039021829,0,0,0,0,0,0,0,0,0,2.00603416722921,8.03370027071169,0,0,0,0,0,6.87734892670021,0,0,0,0,0,2.78736702225161,0,0.534434810531121,1.10273879441814,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0.572824424503484,0.808468755832877,0,0,0.336760265072938,0.286888821570705,0.332660356546013,0.407016343054873,0,0,0,0,0.366724332548599,0.813792356631477,0,0,0|short_description=p2@FOXA2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3170 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5022 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y261,B0ZTD4 | |||
|association_with_transcript=-269bp_to_ENST00000319993,ENST00000419308,NM_021784,uc002wsm.2_5end | |||
|coexpression_cluster_id=C4016 | |||
|description=CAGE_peak_2_at_FOXA2_5end | |||
|id=chr20:22565370..22565388,- | |||
|ontology_enrichment_celltype=CL:0000066!1.71e-21!254;CL:0000223!7.82e-21!59;CL:0002076!1.92e-16!43;CL:0002368!1.81e-14!13;CL:0000082!2.34e-10!19;CL:0002202!8.29e-10!9;CL:0002632!8.29e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0002368;5.19e-23;13!CL:0002202;1.87e-15;9!CL:0002632;1.87e-15;9!CL:0000082;4.70e-15;19!CL:0002076;5.52e-15;42!CL:0002328;7.37e-08;3!CL:0000307;1.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.06e-23,58;CL:0002368,3.80e-23,13;CL:0000066,2.32e-21,253;CL:0002076,8.45e-19,42;CL:0002202,1.88e-15,9;CL:0002632,1.88e-15,9;CL:0000082,4.02e-15,19;CL:0002328,6.12e-08,3;CL:0000068,1.51e-07,3;CL:0000069,1.51e-07,3;CL:0000307,1.51e-07,3;CL:0000377,1.51e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;4.04e-23;30!UBERON:0009497;3.65e-16;13!CL:0000223;2.12e-14;58!UBERON:0004161;1.65e-12;11!CL:0000377;1.25e-07;3 | |||
|ontology_enrichment_disease=DOID:305!3.45e-18!106;DOID:0050687!2.01e-12!143;DOID:162!3.21e-08!235;DOID:14566!1.04e-07!239;DOID:0050615!1.76e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.74e-10;16!DOID:1324;9.34e-09;15!DOID:305;8.76e-08;106!DOID:3119;1.43e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.42e-17,106;DOID:0050687,7.47e-12,143;DOID:0050615,1.70e-10,16;DOID:1324,9.15e-09,15;DOID:3119,1.52e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.59e-31!169;UBERON:0000925!3.59e-31!169;UBERON:0006595!3.59e-31!169;UBERON:0001007!2.61e-29!155;UBERON:0001555!2.61e-29!155;UBERON:0007026!2.61e-29!155;UBERON:0004921!6.64e-27!129;UBERON:0004185!6.64e-27!129;UBERON:0005911!1.38e-23!82;UBERON:0000077!3.72e-22!130;UBERON:0000466!2.49e-19!126;UBERON:0001041!9.35e-19!98;UBERON:0005177!2.13e-16!107;UBERON:0001048!2.03e-14!168;UBERON:0005178!2.25e-14!34;UBERON:0002224!2.25e-14!34;UBERON:0005153!8.37e-14!37;UBERON:0005181!9.21e-14!35;UBERON:0002048!3.57e-13!22;UBERON:0000117!3.57e-13!22;UBERON:0000171!3.57e-13!22;UBERON:0000170!3.57e-13!22;UBERON:0005597!3.57e-13!22;UBERON:0000118!3.57e-13!22;UBERON:0003929!4.63e-13!54;UBERON:0000065!1.28e-12!53;UBERON:0000464!3.31e-12!104;UBERON:0009497!1.15e-11!25;UBERON:0000015!1.15e-11!25;UBERON:0002423!1.15e-11!25;UBERON:0006235!1.15e-11!25;UBERON:0004161!1.15e-11!25;UBERON:0005409!2.79e-11!35;UBERON:0009856!4.02e-11!26;UBERON:0001004!4.26e-11!72;UBERON:0000160!4.47e-11!27;UBERON:0008947!9.44e-11!38;UBERON:0003258!9.44e-11!38;UBERON:0007499!1.80e-10!25;UBERON:0004802!2.34e-10!19;UBERON:0000115!2.34e-10!19;UBERON:0005157!3.50e-10!51;UBERON:0009854!7.30e-10!23;UBERON:0009569!3.17e-09!113;UBERON:0008835!3.23e-09!22;UBERON:0003894!3.23e-09!22;UBERON:0004807!9.04e-09!28;UBERON:0003104!2.54e-08!238;UBERON:0009142!2.54e-08!238;UBERON:0007196!3.13e-08!14;UBERON:0001558!3.13e-08!14;UBERON:0000072!1.40e-07!46;UBERON:0000949!1.61e-07!45;UBERON:0000481!1.66e-07!347;UBERON:0000344!1.74e-07!12;UBERON:0000915!3.75e-07!52;UBERON:0002108!4.13e-07!14;UBERON:0002107!8.45e-07!19;UBERON:0006925!8.45e-07!19;UBERON:0008836!8.45e-07!19 | |||
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|short_description=p2@FOXA2 | |||
}} |
Revision as of 07:46, 12 September 2013
Short description: | p2@FOXA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_FOXA2_5end |
Coexpression cluster: | C4016_gastrointestinal_anaplastic_maxillary_small_smallcell_argyrophil_Bronchial |
Association with transcript: | -269bp_to_ENST00000319993, ENST00000419308, NM_021784, uc002wsm.2_5end |
EntrezGene: | FOXA2 |
HGNC: | 5022 |
UniProt: | Q9Y261B0ZTD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.06e-23 | 58 |
respiratory epithelial cell | 3.80e-23 | 13 |
epithelial cell | 2.32e-21 | 253 |
endo-epithelial cell | 8.45e-19 | 42 |
epithelial cell of tracheobronchial tree | 1.88e-15 | 9 |
epithelial cell of lower respiratory tract | 1.88e-15 | 9 |
epithelial cell of lung | 4.02e-15 | 19 |
bronchial epithelial cell | 6.12e-08 | 3 |
duct epithelial cell | 1.51e-07 | 3 |
branched duct epithelial cell | 1.51e-07 | 3 |
tracheal epithelial cell | 1.51e-07 | 3 |
tracheoblast | 1.51e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.42e-17 | 106 |
cell type cancer | 7.47e-12 | 143 |
respiratory system cancer | 1.70e-10 | 16 |
lung cancer | 9.15e-09 | 15 |
gastrointestinal system cancer | 1.52e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.